EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000016899 (Gene tree)
Gene ID: 103659289
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 11725 bases
Position: chrKK498558.1:132448-144172
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000023532	TruB_N	PF01509.18	1e-20	1	1
ENSUMAP00000023545	TruB_N	PF01509.18	3e-20	1	1
ENSUMAP00000023505	TruB_N	PF01509.18	5.6e-20	1	1
ENSUMAP00000023528	TruB_N	PF01509.18	5.8e-20	1	1
ENSUMAP00000023524	TruB_N	PF01509.18	6.8e-20	1	1
ENSUMAP00000023513	TruB_N	PF01509.18	7.5e-20	1	1
ENSUMAP00000023545	PUA	PF01472.20	3.1e-18	1	1
ENSUMAP00000023505	PUA	PF01472.20	4.8e-18	1	1
ENSUMAP00000023528	PUA	PF01472.20	4.9e-18	1	1
ENSUMAP00000023513	PUA	PF01472.20	5.3e-18	1	1
ENSUMAP00000023524	PUA	PF01472.20	5.3e-18	1	1
ENSUMAP00000023545	DKCLD	PF08068.12	8.7e-32	1	1
ENSUMAP00000023505	DKCLD	PF08068.12	1.3e-31	1	1
ENSUMAP00000023528	DKCLD	PF08068.12	1.4e-31	1	1
ENSUMAP00000023524	DKCLD	PF08068.12	1.5e-31	1	1
ENSUMAP00000023513	DKCLD	PF08068.12	1.7e-31	1	1
ENSUMAP00000023532	DKCLD	PF08068.12	1.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000027821	DKC1-201	1428	-	ENSUMAP00000023505	475 (aa)	-	-
ENSUMAT00000027833	DKC1-202	1614	-	ENSUMAP00000023513	537 (aa)	-	-
ENSUMAT00000027852	DKC1-204	1491	-	ENSUMAP00000023528	496 (aa)	-	-
ENSUMAT00000027857	DKC1-205	924	-	ENSUMAP00000023532	307 (aa)	-	-
ENSUMAT00000027873	DKC1-206	1230	-	ENSUMAP00000023545	409 (aa)	-	-
ENSUMAT00000027848	DKC1-203	1554	-	ENSUMAP00000023524	517 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000016899's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000016899's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000016899	DKC1	93	98.417	ENSG00000130826	DKC1	99	99.515	Homo_sapiens
ENSUMAG00000016899	DKC1	99	82.266	ENSAPOG00000007799	dkc1	94	75.574	Acanthochromis_polyacanthus
ENSUMAG00000016899	DKC1	92	99.206	ENSAMEG00000002776	DKC1	95	95.723	Ailuropoda_melanoleuca
ENSUMAG00000016899	DKC1	96	86.260	ENSACIG00000022614	dkc1	85	85.122	Amphilophus_citrinellus
ENSUMAG00000016899	DKC1	99	82.020	ENSAOCG00000013159	dkc1	90	79.186	Amphiprion_ocellaris
ENSUMAG00000016899	DKC1	99	82.020	ENSAPEG00000002284	dkc1	90	79.458	Amphiprion_percula
ENSUMAG00000016899	DKC1	97	83.168	ENSATEG00000013682	dkc1	89	77.483	Anabas_testudineus
ENSUMAG00000016899	DKC1	92	90.476	ENSACAG00000015600	DKC1	74	85.349	Anolis_carolinensis
ENSUMAG00000016899	DKC1	92	97.884	ENSANAG00000022732	DKC1	95	90.543	Aotus_nancymaae
ENSUMAG00000016899	DKC1	99	78.837	ENSACLG00000015605	dkc1	87	80.471	Astatotilapia_calliptera
ENSUMAG00000016899	DKC1	97	84.422	ENSAMXG00000017108	dkc1	92	77.538	Astyanax_mexicanus
ENSUMAG00000016899	DKC1	99	93.857	ENSBTAG00000013045	DKC1	95	88.981	Bos_taurus
ENSUMAG00000016899	DKC1	92	69.415	WBGene00010478	K01G5.5	98	63.453	Caenorhabditis_elegans
ENSUMAG00000016899	DKC1	92	98.413	ENSCJAG00000004210	DKC1	95	90.361	Callithrix_jacchus
ENSUMAG00000016899	DKC1	92	86.772	ENSCAFG00000009311	-	94	80.738	Canis_familiaris
ENSUMAG00000016899	DKC1	97	95.455	ENSCAFG00000019620	-	95	94.297	Canis_familiaris
ENSUMAG00000016899	DKC1	99	81.818	ENSCAFG00020009379	-	90	79.713	Canis_lupus_dingo
ENSUMAG00000016899	DKC1	97	95.455	ENSCAFG00020008918	-	95	94.297	Canis_lupus_dingo
ENSUMAG00000016899	DKC1	99	93.612	ENSCHIG00000017392	DKC1	95	90.428	Capra_hircus
ENSUMAG00000016899	DKC1	97	94.949	ENSTSYG00000007681	DKC1	95	91.952	Carlito_syrichta
ENSUMAG00000016899	DKC1	96	92.347	ENSCAPG00000003342	DKC1	100	88.864	Cavia_aperea
ENSUMAG00000016899	DKC1	92	98.148	ENSCPOG00000008825	DKC1	95	89.516	Cavia_porcellus
ENSUMAG00000016899	DKC1	95	84.257	ENSCCAG00000027418	DKC1	94	82.495	Cebus_capucinus
ENSUMAG00000016899	DKC1	92	97.884	ENSCATG00000033602	DKC1	95	90.744	Cercocebus_atys
ENSUMAG00000016899	DKC1	100	93.171	ENSCLAG00000000720	DKC1	96	89.879	Chinchilla_lanigera
ENSUMAG00000016899	DKC1	92	97.884	ENSCSAG00000006706	DKC1	95	90.946	Chlorocebus_sabaeus
ENSUMAG00000016899	DKC1	92	91.270	ENSCPBG00000005858	DKC1	89	87.678	Chrysemys_picta_bellii
ENSUMAG00000016899	DKC1	92	80.267	ENSCING00000004599	-	84	73.243	Ciona_intestinalis
ENSUMAG00000016899	DKC1	92	80.800	ENSCSAVG00000010047	-	94	74.645	Ciona_savignyi
ENSUMAG00000016899	DKC1	92	97.884	ENSCANG00000027987	DKC1	95	90.946	Colobus_angolensis_palliatus
ENSUMAG00000016899	DKC1	86	74.504	ENSCGRG00001016789	-	96	68.468	Cricetulus_griseus_chok1gshd
ENSUMAG00000016899	DKC1	92	97.090	ENSCGRG00001014574	-	95	87.726	Cricetulus_griseus_chok1gshd
ENSUMAG00000016899	DKC1	92	97.090	ENSCGRG00000016075	-	95	87.726	Cricetulus_griseus_crigri
ENSUMAG00000016899	DKC1	86	74.716	ENSCGRG00000014809	-	91	69.816	Cricetulus_griseus_crigri
ENSUMAG00000016899	DKC1	96	85.714	ENSCSEG00000012633	dkc1	96	78.271	Cynoglossus_semilaevis
ENSUMAG00000016899	DKC1	92	86.772	ENSCVAG00000010155	dkc1	91	76.609	Cyprinodon_variegatus
ENSUMAG00000016899	DKC1	92	87.566	ENSDARG00000016484	dkc1	89	78.125	Danio_rerio
ENSUMAG00000016899	DKC1	100	91.707	ENSDNOG00000004218	DKC1	95	90.121	Dasypus_novemcinctus
ENSUMAG00000016899	DKC1	69	94.811	ENSDORG00000013566	-	98	82.373	Dipodomys_ordii
ENSUMAG00000016899	DKC1	100	70.660	FBgn0259937	Nop60B	89	67.488	Drosophila_melanogaster
ENSUMAG00000016899	DKC1	92	94.180	ENSETEG00000016095	DKC1	81	93.985	Echinops_telfairi
ENSUMAG00000016899	DKC1	81	76.305	ENSEBUG00000015962	dkc1	99	81.570	Eptatretus_burgeri
ENSUMAG00000016899	DKC1	99	92.383	ENSEASG00005007484	DKC1	95	94.929	Equus_asinus_asinus
ENSUMAG00000016899	DKC1	99	92.383	ENSECAG00000023524	DKC1	95	94.929	Equus_caballus
ENSUMAG00000016899	DKC1	92	94.695	ENSEEUG00000003323	DKC1	98	90.647	Erinaceus_europaeus
ENSUMAG00000016899	DKC1	96	85.242	ENSELUG00000014538	dkc1	87	80.822	Esox_lucius
ENSUMAG00000016899	DKC1	92	98.148	ENSFCAG00000006577	DKC1	95	93.890	Felis_catus
ENSUMAG00000016899	DKC1	100	83.373	ENSFALG00000011496	DKC1	90	78.390	Ficedula_albicollis
ENSUMAG00000016899	DKC1	100	91.951	ENSFDAG00000002516	DKC1	96	86.448	Fukomys_damarensis
ENSUMAG00000016899	DKC1	96	84.264	ENSFHEG00000004627	dkc1	94	75.053	Fundulus_heteroclitus
ENSUMAG00000016899	DKC1	89	87.017	ENSGMOG00000017277	dkc1	100	82.864	Gadus_morhua
ENSUMAG00000016899	DKC1	98	85.396	ENSGALG00000005054	DKC1	91	79.406	Gallus_gallus
ENSUMAG00000016899	DKC1	98	83.459	ENSGAFG00000011486	dkc1	81	76.170	Gambusia_affinis
ENSUMAG00000016899	DKC1	92	87.831	ENSGACG00000004373	dkc1	96	88.450	Gasterosteus_aculeatus
ENSUMAG00000016899	DKC1	92	91.534	ENSGAGG00000011330	DKC1	90	81.760	Gopherus_agassizii
ENSUMAG00000016899	DKC1	92	98.413	ENSGGOG00000001045	DKC1	95	91.549	Gorilla_gorilla
ENSUMAG00000016899	DKC1	97	84.925	ENSHBUG00000012436	dkc1	92	77.440	Haplochromis_burtoni
ENSUMAG00000016899	DKC1	92	97.884	ENSHGLG00000000649	DKC1	95	86.122	Heterocephalus_glaber_female
ENSUMAG00000016899	DKC1	92	97.884	ENSHGLG00100001153	DKC1	96	86.094	Heterocephalus_glaber_male
ENSUMAG00000016899	DKC1	99	82.801	ENSHCOG00000021099	dkc1	79	85.859	Hippocampus_comes
ENSUMAG00000016899	DKC1	98	82.426	ENSIPUG00000010309	dkc1	90	76.774	Ictalurus_punctatus
ENSUMAG00000016899	DKC1	92	98.413	ENSSTOG00000001074	-	95	91.932	Ictidomys_tridecemlineatus
ENSUMAG00000016899	DKC1	92	88.889	ENSSTOG00000020149	-	95	82.390	Ictidomys_tridecemlineatus
ENSUMAG00000016899	DKC1	95	82.040	ENSSTOG00000011904	-	91	80.282	Ictidomys_tridecemlineatus
ENSUMAG00000016899	DKC1	69	94.811	ENSJJAG00000010086	-	98	82.712	Jaculus_jaculus
ENSUMAG00000016899	DKC1	98	81.955	ENSKMAG00000008010	dkc1	94	75.427	Kryptolebias_marmoratus
ENSUMAG00000016899	DKC1	97	83.375	ENSLBEG00000019122	dkc1	92	78.924	Labrus_bergylta
ENSUMAG00000016899	DKC1	92	89.153	ENSLACG00000014025	DKC1	91	88.191	Latimeria_chalumnae
ENSUMAG00000016899	DKC1	98	85.464	ENSLOCG00000013713	dkc1	86	85.096	Lepisosteus_oculatus
ENSUMAG00000016899	DKC1	100	91.220	ENSLAFG00000000221	DKC1	86	91.333	Loxodonta_africana
ENSUMAG00000016899	DKC1	92	97.884	ENSMFAG00000032398	DKC1	82	90.946	Macaca_fascicularis
ENSUMAG00000016899	DKC1	92	97.884	ENSMMUG00000005768	DKC1	95	90.946	Macaca_mulatta
ENSUMAG00000016899	DKC1	92	97.884	ENSMNEG00000034503	DKC1	95	90.946	Macaca_nemestrina
ENSUMAG00000016899	DKC1	92	97.884	ENSMLEG00000034422	DKC1	95	90.946	Mandrillus_leucophaeus
ENSUMAG00000016899	DKC1	93	88.391	ENSMAMG00000005427	dkc1	91	84.691	Mastacembelus_armatus
ENSUMAG00000016899	DKC1	97	85.176	ENSMZEG00005014503	dkc1	92	77.657	Maylandia_zebra
ENSUMAG00000016899	DKC1	89	89.256	ENSMGAG00000009238	DKC1	94	78.571	Meleagris_gallopavo
ENSUMAG00000016899	DKC1	69	94.811	ENSMAUG00000016454	-	98	82.712	Mesocricetus_auratus
ENSUMAG00000016899	DKC1	99	91.646	ENSMICG00000038751	-	95	91.717	Microcebus_murinus
ENSUMAG00000016899	DKC1	96	80.916	ENSMICG00000002818	-	99	83.014	Microcebus_murinus
ENSUMAG00000016899	DKC1	69	91.509	ENSMOCG00000001169	-	98	79.661	Microtus_ochrogaster
ENSUMAG00000016899	DKC1	93	87.368	ENSMMOG00000020348	dkc1	88	84.444	Mola_mola
ENSUMAG00000016899	DKC1	98	88.089	ENSMODG00000009243	DKC1	70	90.750	Monodelphis_domestica
ENSUMAG00000016899	DKC1	97	83.417	ENSMALG00000009454	dkc1	90	77.974	Monopterus_albus
ENSUMAG00000016899	DKC1	92	84.197	MGP_CAROLIEiJ_G0033191	Dkc1	86	94.444	Mus_caroli
ENSUMAG00000016899	DKC1	92	97.354	ENSMUSG00000031403	Dkc1	95	88.889	Mus_musculus
ENSUMAG00000016899	DKC1	92	97.354	MGP_PahariEiJ_G0031735	Dkc1	95	88.105	Mus_pahari
ENSUMAG00000016899	DKC1	92	97.354	MGP_SPRETEiJ_G0034351	Dkc1	95	88.485	Mus_spretus
ENSUMAG00000016899	DKC1	99	93.797	ENSMPUG00000016136	DKC1	91	95.519	Mustela_putorius_furo
ENSUMAG00000016899	DKC1	92	93.122	ENSMLUG00000011918	DKC1	87	86.638	Myotis_lucifugus
ENSUMAG00000016899	DKC1	68	95.238	ENSNGAG00000015724	-	98	82.935	Nannospalax_galili
ENSUMAG00000016899	DKC1	93	88.391	ENSNBRG00000005638	dkc1	80	85.678	Neolamprologus_brichardi
ENSUMAG00000016899	DKC1	92	98.413	ENSNLEG00000014323	DKC1	95	91.549	Nomascus_leucogenys
ENSUMAG00000016899	DKC1	92	88.095	ENSMEUG00000001066	DKC1	96	80.717	Notamacropus_eugenii
ENSUMAG00000016899	DKC1	81	89.394	ENSOPRG00000005248	DKC1	73	89.071	Ochotona_princeps
ENSUMAG00000016899	DKC1	69	95.755	ENSODEG00000000549	-	98	83.390	Octodon_degus
ENSUMAG00000016899	DKC1	92	97.619	ENSODEG00000011816	-	89	91.757	Octodon_degus
ENSUMAG00000016899	DKC1	97	84.887	ENSONIG00000013889	dkc1	92	78.355	Oreochromis_niloticus
ENSUMAG00000016899	DKC1	55	78.947	ENSOANG00000022295	-	83	66.113	Ornithorhynchus_anatinus
ENSUMAG00000016899	DKC1	93	95.263	ENSOANG00000008713	-	85	91.707	Ornithorhynchus_anatinus
ENSUMAG00000016899	DKC1	92	98.148	ENSOCUG00000012646	DKC1	95	90.524	Oryctolagus_cuniculus
ENSUMAG00000016899	DKC1	93	87.071	ENSORLG00000018748	dkc1	89	77.042	Oryzias_latipes
ENSUMAG00000016899	DKC1	97	84.091	ENSOMEG00000005786	dkc1	82	85.714	Oryzias_melastigma
ENSUMAG00000016899	DKC1	97	94.444	ENSOGAG00000003399	DKC1	95	91.331	Otolemur_garnettii
ENSUMAG00000016899	DKC1	99	93.612	ENSOARG00000003047	DKC1	95	90.224	Ovis_aries
ENSUMAG00000016899	DKC1	92	98.413	ENSPPAG00000023820	DKC1	95	90.946	Pan_paniscus
ENSUMAG00000016899	DKC1	92	98.148	ENSPPRG00000009104	DKC1	95	93.686	Panthera_pardus
ENSUMAG00000016899	DKC1	96	93.300	ENSPTIG00000017469	DKC1	95	92.827	Panthera_tigris_altaica
ENSUMAG00000016899	DKC1	92	98.413	ENSPTRG00000043416	-	82	92.153	Pan_troglodytes
ENSUMAG00000016899	DKC1	92	98.413	ENSPTRG00000022449	DKC1	95	91.549	Pan_troglodytes
ENSUMAG00000016899	DKC1	92	97.884	ENSPANG00000011978	DKC1	95	90.946	Papio_anubis
ENSUMAG00000016899	DKC1	94	88.052	ENSPKIG00000008443	dkc1	90	81.293	Paramormyrops_kingsleyae
ENSUMAG00000016899	DKC1	84	93.314	ENSPSIG00000013765	DKC1	86	92.997	Pelodiscus_sinensis
ENSUMAG00000016899	DKC1	93	82.850	ENSPMGG00000004097	dkc1	88	72.443	Periophthalmus_magnuspinnatus
ENSUMAG00000016899	DKC1	64	93.909	ENSPEMG00000013348	Dkc1	94	54.890	Peromyscus_maniculatus_bairdii
ENSUMAG00000016899	DKC1	98	87.871	ENSPCIG00000016706	DKC1	74	85.556	Phascolarctos_cinereus
ENSUMAG00000016899	DKC1	96	84.518	ENSPFOG00000018653	dkc1	94	76.433	Poecilia_formosa
ENSUMAG00000016899	DKC1	96	84.518	ENSPLAG00000003272	dkc1	85	76.433	Poecilia_latipinna
ENSUMAG00000016899	DKC1	98	83.709	ENSPMEG00000010413	dkc1	94	76.221	Poecilia_mexicana
ENSUMAG00000016899	DKC1	98	83.709	ENSPREG00000004100	dkc1	87	78.700	Poecilia_reticulata
ENSUMAG00000016899	DKC1	92	98.413	ENSPPYG00000020892	DKC1	97	91.036	Pongo_abelii
ENSUMAG00000016899	DKC1	93	92.105	ENSPCAG00000015034	DKC1	73	94.118	Procavia_capensis
ENSUMAG00000016899	DKC1	100	92.927	ENSPCOG00000026874	DKC1	95	92.153	Propithecus_coquereli
ENSUMAG00000016899	DKC1	98	92.519	ENSPVAG00000009222	DKC1	95	90.928	Pteropus_vampyrus
ENSUMAG00000016899	DKC1	93	87.863	ENSPNYG00000020063	dkc1	79	85.606	Pundamilia_nyererei
ENSUMAG00000016899	DKC1	98	84.040	ENSPNAG00000005780	dkc1	87	80.866	Pygocentrus_nattereri
ENSUMAG00000016899	DKC1	96	87.532	ENSRNOG00000055562	Dkc1	87	85.520	Rattus_norvegicus
ENSUMAG00000016899	DKC1	92	97.884	ENSRBIG00000028457	DKC1	82	91.549	Rhinopithecus_bieti
ENSUMAG00000016899	DKC1	92	97.884	ENSRROG00000044780	DKC1	95	90.946	Rhinopithecus_roxellana
ENSUMAG00000016899	DKC1	91	71.582	YLR175W	-	89	65.116	Saccharomyces_cerevisiae
ENSUMAG00000016899	DKC1	100	92.927	ENSSBOG00000033746	DKC1	95	91.348	Saimiri_boliviensis_boliviensis
ENSUMAG00000016899	DKC1	98	87.871	ENSSHAG00000002463	DKC1	95	83.444	Sarcophilus_harrisii
ENSUMAG00000016899	DKC1	98	85.037	ENSSFOG00015009585	dkc1	81	84.541	Scleropages_formosus
ENSUMAG00000016899	DKC1	97	85.354	ENSSMAG00000002552	dkc1	88	79.545	Scophthalmus_maximus
ENSUMAG00000016899	DKC1	97	85.139	ENSSDUG00000009963	dkc1	88	80.317	Seriola_dumerili
ENSUMAG00000016899	DKC1	93	88.391	ENSSLDG00000019342	dkc1	96	78.280	Seriola_lalandi_dorsalis
ENSUMAG00000016899	DKC1	92	90.212	ENSSARG00000001822	DKC1	96	83.061	Sorex_araneus
ENSUMAG00000016899	DKC1	92	91.005	ENSSPUG00000018907	DKC1	83	84.685	Sphenodon_punctatus
ENSUMAG00000016899	DKC1	93	87.599	ENSSPAG00000002585	dkc1	79	83.413	Stegastes_partitus
ENSUMAG00000016899	DKC1	93	97.098	ENSSSCG00000012823	DKC1	95	93.598	Sus_scrofa
ENSUMAG00000016899	DKC1	96	84.224	ENSTGUG00000006781	DKC1	94	79.118	Taeniopygia_guttata
ENSUMAG00000016899	DKC1	98	83.500	ENSTRUG00000004413	dkc1	85	82.547	Takifugu_rubripes
ENSUMAG00000016899	DKC1	93	70.052	ENSTNIG00000002582	dkc1	84	65.893	Tetraodon_nigroviridis
ENSUMAG00000016899	DKC1	71	89.632	ENSTBEG00000011262	DKC1	94	88.319	Tupaia_belangeri
ENSUMAG00000016899	DKC1	75	98.690	ENSTTRG00000008089	DKC1	66	98.917	Tursiops_truncatus
ENSUMAG00000016899	DKC1	100	99.597	ENSUAMG00000022721	DKC1	100	99.597	Ursus_americanus
ENSUMAG00000016899	DKC1	97	93.797	ENSVVUG00000020734	-	87	93.042	Vulpes_vulpes
ENSUMAG00000016899	DKC1	98	78.750	ENSVVUG00000021671	-	90	73.922	Vulpes_vulpes
ENSUMAG00000016899	DKC1	97	86.111	ENSXETG00000032517	DKC1	82	86.165	Xenopus_tropicalis
ENSUMAG00000016899	DKC1	93	86.807	ENSXCOG00000005498	dkc1	91	80.516	Xiphophorus_couchianus
ENSUMAG00000016899	DKC1	98	83.208	ENSXMAG00000004919	dkc1	93	77.056	Xiphophorus_maculatus