EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000017116 (Gene tree)
Gene ID: 103673994
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 23751 bases
Position: chrKK498679.1:3891-27641
Accession: 103673994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000023523	MMR_HSR1	PF01926.23	2.1e-05	1	1
ENSUMAP00000023520	MMR_HSR1	PF01926.23	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000027847	-	2115	-	ENSUMAP00000023523	223 (aa)	-	-
ENSUMAT00000027844	-	1942	XM_008702847	ENSUMAP00000023520	250 (aa)	XP_008701069	UPI0004DFF153

Gene Model

Click here to download ENSUMAG00000017116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000017116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000017116	-	69	34.810	ENSUMAG00000003596	RAB14	73	34.810
ENSUMAG00000017116	-	63	36.486	ENSUMAG00000011821	RAB33A	63	36.486
ENSUMAG00000017116	-	68	35.484	ENSUMAG00000012273	RAB11A	71	36.601
ENSUMAG00000017116	-	73	34.104	ENSUMAG00000005348	-	85	34.857
ENSUMAG00000017116	-	67	36.774	ENSUMAG00000021038	RAB1A	77	36.774
ENSUMAG00000017116	-	67	36.601	ENSUMAG00000023270	RAB5C	71	36.601
ENSUMAG00000017116	-	67	37.419	ENSUMAG00000011180	RAB1B	69	37.419
ENSUMAG00000017116	-	67	35.948	ENSUMAG00000018295	RAB5A	71	35.948
ENSUMAG00000017116	-	67	36.601	ENSUMAG00000016263	RAB5B	71	36.601
ENSUMAG00000017116	-	65	30.667	ENSUMAG00000014965	MRAS	67	31.677
ENSUMAG00000017116	-	51	31.304	ENSUMAG00000010248	RAB6A	63	31.304
ENSUMAG00000017116	-	63	36.054	ENSUMAG00000014975	RAB33B	65	36.054
ENSUMAG00000017116	-	65	38.255	ENSUMAG00000015574	-	72	38.255
ENSUMAG00000017116	-	69	30.380	ENSUMAG00000018376	RAB25	74	30.380
ENSUMAG00000017116	-	69	31.250	ENSUMAG00000017386	RAB39B	75	31.250
ENSUMAG00000017116	-	51	37.719	ENSUMAG00000014594	RAB11B	56	37.719
ENSUMAG00000017116	-	73	35.429	ENSUMAG00000019370	-	85	35.429
ENSUMAG00000017116	-	67	32.468	ENSUMAG00000004940	RAB2B	71	32.468
ENSUMAG00000017116	-	76	34.463	ENSUMAG00000023572	RAB30	86	34.463
ENSUMAG00000017116	-	70	35.542	ENSUMAG00000001213	RAB9B	84	36.257
ENSUMAG00000017116	-	76	35.028	ENSUMAG00000015081	RAB7A	94	35.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000017116	-	99	89.593	ENSG00000144134	RABL2A	100	92.105	Homo_sapiens
ENSUMAG00000017116	-	99	89.593	ENSG00000079974	RABL2B	100	91.919	Homo_sapiens
ENSUMAG00000017116	-	99	75.909	ENSAPOG00000023708	rabl2	99	75.909	Acanthochromis_polyacanthus
ENSUMAG00000017116	-	100	96.916	ENSAMEG00000003173	-	100	96.916	Ailuropoda_melanoleuca
ENSUMAG00000017116	-	99	71.622	ENSACIG00000000670	rabl2	99	71.622	Amphilophus_citrinellus
ENSUMAG00000017116	-	99	76.364	ENSAOCG00000008069	rabl2	99	76.364	Amphiprion_ocellaris
ENSUMAG00000017116	-	92	79.612	ENSAPEG00000003164	rabl2	92	79.612	Amphiprion_percula
ENSUMAG00000017116	-	99	76.364	ENSATEG00000001111	rabl2	99	76.364	Anabas_testudineus
ENSUMAG00000017116	-	74	87.195	ENSACAG00000000418	-	99	82.857	Anolis_carolinensis
ENSUMAG00000017116	-	99	88.235	ENSANAG00000021001	-	97	88.235	Aotus_nancymaae
ENSUMAG00000017116	-	99	73.874	ENSACLG00000025632	rabl2	99	73.874	Astatotilapia_calliptera
ENSUMAG00000017116	-	95	79.621	ENSAMXG00000040611	rabl2	95	79.621	Astyanax_mexicanus
ENSUMAG00000017116	-	100	88.938	ENSBTAG00000004876	RABL2B	100	89.381	Bos_taurus
ENSUMAG00000017116	-	99	89.593	ENSCJAG00000018414	-	97	89.593	Callithrix_jacchus
ENSUMAG00000017116	-	100	94.170	ENSCAFG00020006938	-	100	94.170	Canis_lupus_dingo
ENSUMAG00000017116	-	100	86.147	ENSCHIG00000000591	-	100	86.580	Capra_hircus
ENSUMAG00000017116	-	99	85.520	ENSTSYG00000004323	-	97	85.520	Carlito_syrichta
ENSUMAG00000017116	-	97	88.940	ENSCPOG00000026899	-	98	88.940	Cavia_porcellus
ENSUMAG00000017116	-	99	89.593	ENSCCAG00000025944	-	97	89.593	Cebus_capucinus
ENSUMAG00000017116	-	99	87.330	ENSCATG00000034307	-	97	87.330	Cercocebus_atys
ENSUMAG00000017116	-	99	89.593	ENSCLAG00000017218	-	99	89.593	Chinchilla_lanigera
ENSUMAG00000017116	-	99	88.341	ENSCSAG00000004698	-	97	88.341	Chlorocebus_sabaeus
ENSUMAG00000017116	-	89	86.364	ENSCPBG00000011715	-	88	86.364	Chrysemys_picta_bellii
ENSUMAG00000017116	-	81	67.222	ENSCING00000004961	-	84	67.222	Ciona_intestinalis
ENSUMAG00000017116	-	81	68.333	ENSCSAVG00000006042	-	87	68.333	Ciona_savignyi
ENSUMAG00000017116	-	99	87.330	ENSCANG00000030879	-	97	87.330	Colobus_angolensis_palliatus
ENSUMAG00000017116	-	100	88.789	ENSCGRG00001021894	Rabl2	100	88.789	Cricetulus_griseus_chok1gshd
ENSUMAG00000017116	-	91	77.833	ENSCSEG00000005479	rabl2	97	74.771	Cynoglossus_semilaevis
ENSUMAG00000017116	-	96	75.587	ENSCVAG00000011432	rabl2	96	75.587	Cyprinodon_variegatus
ENSUMAG00000017116	-	91	78.818	ENSDARG00000063321	rabl2	93	78.818	Danio_rerio
ENSUMAG00000017116	-	99	93.243	ENSDNOG00000035151	-	99	93.243	Dasypus_novemcinctus
ENSUMAG00000017116	-	100	88.789	ENSDORG00000000003	Rabl2	100	88.789	Dipodomys_ordii
ENSUMAG00000017116	-	100	92.377	ENSEASG00005008239	-	100	92.377	Equus_asinus_asinus
ENSUMAG00000017116	-	100	92.825	ENSECAG00000026942	-	100	92.825	Equus_caballus
ENSUMAG00000017116	-	100	96.413	ENSFCAG00000033642	-	100	96.413	Felis_catus
ENSUMAG00000017116	-	100	88.789	ENSFDAG00000002113	-	100	88.789	Fukomys_damarensis
ENSUMAG00000017116	-	92	79.612	ENSFHEG00000015015	rabl2	78	79.612	Fundulus_heteroclitus
ENSUMAG00000017116	-	88	77.665	ENSGMOG00000018928	rabl2	100	77.665	Gadus_morhua
ENSUMAG00000017116	-	100	78.475	ENSGALG00000032458	RABL2B	100	78.475	Gallus_gallus
ENSUMAG00000017116	-	86	81.250	ENSGAFG00000005188	rabl2	95	77.251	Gambusia_affinis
ENSUMAG00000017116	-	99	74.545	ENSGACG00000012474	rabl2	99	74.545	Gasterosteus_aculeatus
ENSUMAG00000017116	-	99	73.874	ENSHBUG00000010964	rabl2	99	73.874	Haplochromis_burtoni
ENSUMAG00000017116	-	100	88.789	ENSHGLG00000005750	-	100	88.789	Heterocephalus_glaber_female
ENSUMAG00000017116	-	100	88.789	ENSHGLG00100016281	-	100	88.789	Heterocephalus_glaber_male
ENSUMAG00000017116	-	100	91.928	ENSSTOG00000002723	-	100	91.928	Ictidomys_tridecemlineatus
ENSUMAG00000017116	-	100	86.547	ENSJJAG00000010792	Rabl2	100	86.547	Jaculus_jaculus
ENSUMAG00000017116	-	99	75.909	ENSKMAG00000012723	rabl2	99	75.909	Kryptolebias_marmoratus
ENSUMAG00000017116	-	99	77.273	ENSLBEG00000003644	rabl2	99	77.273	Labrus_bergylta
ENSUMAG00000017116	-	92	81.951	ENSLACG00000003722	rabl2	92	81.951	Latimeria_chalumnae
ENSUMAG00000017116	-	92	82.524	ENSLOCG00000016767	rabl2	91	82.524	Lepisosteus_oculatus
ENSUMAG00000017116	-	99	88.688	ENSMFAG00000044775	-	97	88.688	Macaca_fascicularis
ENSUMAG00000017116	-	99	88.688	ENSMMUG00000022914	RABL2B	97	88.688	Macaca_mulatta
ENSUMAG00000017116	-	99	88.235	ENSMNEG00000028460	-	96	88.235	Macaca_nemestrina
ENSUMAG00000017116	-	99	87.330	ENSMLEG00000032621	-	96	87.330	Mandrillus_leucophaeus
ENSUMAG00000017116	-	92	80.097	ENSMAMG00000008168	rabl2	92	80.097	Mastacembelus_armatus
ENSUMAG00000017116	-	92	76.699	ENSMZEG00005019758	rabl2	95	76.699	Maylandia_zebra
ENSUMAG00000017116	-	99	86.937	ENSMAUG00000010955	Rabl2	100	86.937	Mesocricetus_auratus
ENSUMAG00000017116	-	99	93.665	ENSMICG00000031301	-	97	93.665	Microcebus_murinus
ENSUMAG00000017116	-	99	86.486	ENSMOCG00000002775	Rabl2	99	86.486	Microtus_ochrogaster
ENSUMAG00000017116	-	96	86.916	ENSMODG00000010838	-	98	86.916	Monodelphis_domestica
ENSUMAG00000017116	-	99	74.545	ENSMALG00000005944	rabl2	99	74.545	Monopterus_albus
ENSUMAG00000017116	-	100	85.202	MGP_CAROLIEiJ_G0020176	Rabl2	99	85.333	Mus_caroli
ENSUMAG00000017116	-	100	84.305	ENSMUSG00000022621	Rabl2	100	84.305	Mus_musculus
ENSUMAG00000017116	-	100	85.202	MGP_PahariEiJ_G0020181	Rabl2	100	85.202	Mus_pahari
ENSUMAG00000017116	-	100	84.305	MGP_SPRETEiJ_G0021073	Rabl2	100	84.305	Mus_spretus
ENSUMAG00000017116	-	100	95.067	ENSMPUG00000001806	-	100	95.067	Mustela_putorius_furo
ENSUMAG00000017116	-	99	83.784	ENSNGAG00000012843	Rabl2	96	83.784	Nannospalax_galili
ENSUMAG00000017116	-	99	73.874	ENSNBRG00000000489	rabl2	99	73.874	Neolamprologus_brichardi
ENSUMAG00000017116	-	99	88.688	ENSNLEG00000030435	-	96	88.688	Nomascus_leucogenys
ENSUMAG00000017116	-	100	87.892	ENSODEG00000015650	-	100	87.892	Octodon_degus
ENSUMAG00000017116	-	99	74.324	ENSONIG00000014885	rabl2	99	74.324	Oreochromis_niloticus
ENSUMAG00000017116	-	98	73.516	ENSORLG00000009874	rabl2	98	73.303	Oryzias_latipes
ENSUMAG00000017116	-	98	73.516	ENSORLG00020001721	rabl2	98	73.303	Oryzias_latipes_hni
ENSUMAG00000017116	-	98	73.516	ENSORLG00015014268	rabl2	98	73.303	Oryzias_latipes_hsok
ENSUMAG00000017116	-	92	77.670	ENSOMEG00000008576	rabl2	95	77.670	Oryzias_melastigma
ENSUMAG00000017116	-	99	93.665	ENSOGAG00000009123	-	97	93.665	Otolemur_garnettii
ENSUMAG00000017116	-	100	93.778	ENSPPRG00000014642	-	99	93.778	Panthera_pardus
ENSUMAG00000017116	-	100	96.413	ENSPTIG00000018747	-	100	96.413	Panthera_tigris_altaica
ENSUMAG00000017116	-	99	84.416	ENSPTRG00000014555	-	97	84.416	Pan_troglodytes
ENSUMAG00000017116	-	99	83.913	ENSPANG00000036121	-	96	83.913	Papio_anubis
ENSUMAG00000017116	-	92	81.553	ENSPKIG00000025372	rabl2	92	81.553	Paramormyrops_kingsleyae
ENSUMAG00000017116	-	89	87.374	ENSPSIG00000014041	-	88	87.374	Pelodiscus_sinensis
ENSUMAG00000017116	-	88	77.665	ENSPMGG00000012946	rabl2	96	77.665	Periophthalmus_magnuspinnatus
ENSUMAG00000017116	-	100	86.547	ENSPEMG00000024045	Rabl2	100	86.547	Peromyscus_maniculatus_bairdii
ENSUMAG00000017116	-	96	83.636	ENSPCIG00000012436	-	93	82.018	Phascolarctos_cinereus
ENSUMAG00000017116	-	95	77.465	ENSPFOG00000017960	rabl2	95	77.465	Poecilia_formosa
ENSUMAG00000017116	-	95	78.199	ENSPLAG00000015685	rabl2	95	78.199	Poecilia_latipinna
ENSUMAG00000017116	-	95	78.199	ENSPMEG00000004703	rabl2	95	78.199	Poecilia_mexicana
ENSUMAG00000017116	-	87	79.381	ENSPREG00000014761	rabl2	96	79.381	Poecilia_reticulata
ENSUMAG00000017116	-	99	89.140	ENSPPYG00000012000	-	97	89.140	Pongo_abelii
ENSUMAG00000017116	-	99	94.118	ENSPCOG00000024865	-	97	94.118	Propithecus_coquereli
ENSUMAG00000017116	-	99	86.266	ENSPVAG00000004539	-	98	86.266	Pteropus_vampyrus
ENSUMAG00000017116	-	99	73.874	ENSPNYG00000004845	rabl2	99	73.874	Pundamilia_nyererei
ENSUMAG00000017116	-	90	81.592	ENSPNAG00000024254	rabl2	99	77.027	Pygocentrus_nattereri
ENSUMAG00000017116	-	100	85.650	ENSRNOG00000013947	Rabl2	95	81.743	Rattus_norvegicus
ENSUMAG00000017116	-	99	87.783	ENSRBIG00000033607	-	97	87.783	Rhinopithecus_bieti
ENSUMAG00000017116	-	99	88.688	ENSRROG00000031130	-	97	88.688	Rhinopithecus_roxellana
ENSUMAG00000017116	-	99	90.045	ENSSBOG00000033266	-	97	90.045	Saimiri_boliviensis_boliviensis
ENSUMAG00000017116	-	91	79.902	ENSSFOG00015020738	rabl2	92	80.097	Scleropages_formosus
ENSUMAG00000017116	-	92	79.126	ENSSMAG00000004606	rabl2	92	79.126	Scophthalmus_maximus
ENSUMAG00000017116	-	99	73.874	ENSSDUG00000014765	rabl2	99	73.874	Seriola_dumerili
ENSUMAG00000017116	-	76	93.529	ENSSSCG00000025041	-	100	93.529	Sus_scrofa
ENSUMAG00000017116	-	92	78.155	ENSTGUG00000016028	-	99	78.155	Taeniopygia_guttata
ENSUMAG00000017116	-	99	75.909	ENSTRUG00000012454	rabl2	99	75.909	Takifugu_rubripes
ENSUMAG00000017116	-	99	75.455	ENSTNIG00000017951	rabl2	99	75.455	Tetraodon_nigroviridis
ENSUMAG00000017116	-	88	99.492	ENSUAMG00000015761	-	88	99.492	Ursus_americanus
ENSUMAG00000017116	-	100	94.170	ENSVVUG00000025761	-	100	94.170	Vulpes_vulpes
ENSUMAG00000017116	-	93	80.193	ENSXETG00000015712	rabl2b	92	80.193	Xenopus_tropicalis
ENSUMAG00000017116	-	95	78.199	ENSXMAG00000004569	rabl2	95	78.199	Xiphophorus_maculatus