EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000017197 (Gene tree)
Gene ID: 103661364
Gene Symbol: ARL5C
Alias: -
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 5698 bases
Position: chrKK498512.1:450474-456171
Accession: 103661364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000023629	MMR_HSR1	PF01926.23	1.7e-07	1	1
ENSUMAP00000023627	MMR_HSR1	PF01926.23	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000027977	ARL5C-201	1460	XM_008689095	ENSUMAP00000023627	222 (aa)	XP_008687309	UPI0004E01B33
ENSUMAT00000027980	ARL5C-202	1331	-	ENSUMAP00000023629	179 (aa)	XP_008687325	UPI0004DFD8DF

Gene Model

Click here to download ENSUMAG00000017197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000017197's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000017197	ARL5C	98	45.455	ENSUMAG00000021908	ARF4	98	45.455
ENSUMAG00000017197	ARL5C	98	48.864	ENSUMAG00000000918	ARF1	80	48.864
ENSUMAG00000017197	ARL5C	98	40.331	ENSUMAG00000013919	ARL6	97	40.331
ENSUMAG00000017197	ARL5C	94	74.405	ENSUMAG00000002404	ARL5A	98	74.405
ENSUMAG00000017197	ARL5C	87	41.772	ENSUMAG00000011131	ARL14	87	41.772
ENSUMAG00000017197	ARL5C	98	47.159	ENSUMAG00000004814	-	71	47.159
ENSUMAG00000017197	ARL5C	84	39.241	ENSUMAG00000013306	ARL4C	73	39.241
ENSUMAG00000017197	ARL5C	92	37.647	ENSUMAG00000018435	ARL11	93	37.647
ENSUMAG00000017197	ARL5C	98	47.159	ENSUMAG00000006555	-	97	47.159
ENSUMAG00000017197	ARL5C	92	45.455	ENSUMAG00000023500	ARL3	91	45.455
ENSUMAG00000017197	ARL5C	89	47.170	ENSUMAG00000019547	ARL1	96	45.665
ENSUMAG00000017197	ARL5C	86	35.625	ENSUMAG00000012795	ARL4D	80	35.625
ENSUMAG00000017197	ARL5C	84	43.333	ENSUMAG00000007990	-	80	43.333
ENSUMAG00000017197	ARL5C	98	47.727	ENSUMAG00000015477	-	97	47.727
ENSUMAG00000017197	ARL5C	98	77.714	ENSUMAG00000013390	ARL5B	97	77.714
ENSUMAG00000017197	ARL5C	85	45.098	ENSUMAG00000007345	ARF6	99	45.098
ENSUMAG00000017197	ARL5C	63	31.858	ENSUMAG00000024507	ARL10	66	30.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000017197	ARL5C	100	94.413	ENSAMEG00000004195	ARL5C	99	94.413	Ailuropoda_melanoleuca
ENSUMAG00000017197	ARL5C	99	81.461	ENSACAG00000003879	-	99	81.461	Anolis_carolinensis
ENSUMAG00000017197	ARL5C	100	94.413	ENSCAFG00000016525	ARL5C	100	94.413	Canis_familiaris
ENSUMAG00000017197	ARL5C	100	88.827	ENSCHIG00000008208	ARL5C	100	88.827	Capra_hircus
ENSUMAG00000017197	ARL5C	59	85.849	ENSCHOG00000013232	-	100	85.849	Choloepus_hoffmanni
ENSUMAG00000017197	ARL5C	99	79.661	ENSCGRG00001000695	Arl5c	99	79.661	Cricetulus_griseus_chok1gshd
ENSUMAG00000017197	ARL5C	99	80.226	ENSCGRG00000007376	Arl5c	99	80.226	Cricetulus_griseus_crigri
ENSUMAG00000017197	ARL5C	100	88.827	ENSDNOG00000019741	ARL5C	100	88.827	Dasypus_novemcinctus
ENSUMAG00000017197	ARL5C	99	88.202	ENSDORG00000016304	Arl5c	99	88.202	Dipodomys_ordii
ENSUMAG00000017197	ARL5C	92	90.244	ENSEASG00005001922	ARL5C	76	90.244	Equus_asinus_asinus
ENSUMAG00000017197	ARL5C	100	91.061	ENSECAG00000009024	ARL5C	100	91.061	Equus_caballus
ENSUMAG00000017197	ARL5C	100	92.179	ENSFCAG00000009962	ARL5C	100	92.179	Felis_catus
ENSUMAG00000017197	ARL5C	100	91.620	ENSSTOG00000011104	ARL5C	100	91.620	Ictidomys_tridecemlineatus
ENSUMAG00000017197	ARL5C	100	79.888	ENSLACG00000015332	ARL5C	100	79.888	Latimeria_chalumnae
ENSUMAG00000017197	ARL5C	100	90.503	ENSLAFG00000018248	ARL5C	99	90.503	Loxodonta_africana
ENSUMAG00000017197	ARL5C	99	76.836	ENSMAUG00000012845	Arl5c	87	76.836	Mesocricetus_auratus
ENSUMAG00000017197	ARL5C	100	90.503	ENSMICG00000002661	ARL5C	100	90.503	Microcebus_murinus
ENSUMAG00000017197	ARL5C	100	77.095	ENSMOCG00000000234	Arl5c	100	77.095	Microtus_ochrogaster
ENSUMAG00000017197	ARL5C	100	88.268	MGP_CAROLIEiJ_G0017071	Arl5c	100	88.268	Mus_caroli
ENSUMAG00000017197	ARL5C	100	87.709	ENSMUSG00000038352	Arl5c	100	87.709	Mus_musculus
ENSUMAG00000017197	ARL5C	100	88.268	MGP_PahariEiJ_G0018200	Arl5c	100	88.268	Mus_pahari
ENSUMAG00000017197	ARL5C	100	87.709	MGP_SPRETEiJ_G0017917	Arl5c	100	87.709	Mus_spretus
ENSUMAG00000017197	ARL5C	100	89.385	ENSMLUG00000030149	ARL5C	99	89.385	Myotis_lucifugus
ENSUMAG00000017197	ARL5C	100	87.709	ENSOGAG00000005894	ARL5C	100	87.709	Otolemur_garnettii
ENSUMAG00000017197	ARL5C	100	89.385	ENSOARG00000010377	ARL5C	99	89.385	Ovis_aries
ENSUMAG00000017197	ARL5C	100	93.296	ENSPPRG00000000975	ARL5C	100	93.296	Panthera_pardus
ENSUMAG00000017197	ARL5C	100	92.179	ENSPTIG00000017487	ARL5C	100	92.179	Panthera_tigris_altaica
ENSUMAG00000017197	ARL5C	99	88.136	ENSPEMG00000008932	Arl5c	99	88.136	Peromyscus_maniculatus_bairdii
ENSUMAG00000017197	ARL5C	100	91.620	ENSPCOG00000028489	ARL5C	100	91.620	Propithecus_coquereli
ENSUMAG00000017197	ARL5C	94	89.881	ENSPVAG00000008495	ARL5C	99	89.881	Pteropus_vampyrus
ENSUMAG00000017197	ARL5C	100	85.475	ENSRNOG00000036880	Arl5c	100	85.475	Rattus_norvegicus
ENSUMAG00000017197	ARL5C	98	73.864	ENSSBOG00000021022	ARL5C	100	73.864	Saimiri_boliviensis_boliviensis
ENSUMAG00000017197	ARL5C	96	83.041	ENSSPUG00000007555	ARL5C	100	84.663	Sphenodon_punctatus
ENSUMAG00000017197	ARL5C	100	89.385	ENSTBEG00000007274	ARL5C	100	89.385	Tupaia_belangeri
ENSUMAG00000017197	ARL5C	100	99.441	ENSUAMG00000012299	ARL5C	100	99.441	Ursus_americanus
ENSUMAG00000017197	ARL5C	100	75.978	ENSXETG00000023713	arl5c	92	75.978	Xenopus_tropicalis