EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000017542 (Gene tree)
Gene ID: 103669535
Gene Symbol: MBD4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 9693 bases
Position: chrKK498639.1:5572980-5582672
Accession: 103669535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000024092	MBD	PF01429.19	6.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000028514	MBD4-201	2254	XM_008697852	ENSUMAP00000024092	564 (aa)	XP_008696074	UPI0004DFE40D

Gene Model

Click here to download ENSUMAG00000017542's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000017542's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000017542	MBD4	100	78.957	ENSG00000129071	MBD4	99	78.957	Homo_sapiens
ENSUMAG00000017542	MBD4	86	40.779	ENSAPOG00000021668	mbd4	95	41.785	Acanthochromis_polyacanthus
ENSUMAG00000017542	MBD4	100	94.159	ENSAMEG00000004562	MBD4	99	94.159	Ailuropoda_melanoleuca
ENSUMAG00000017542	MBD4	86	41.165	ENSAOCG00000001157	mbd4	95	44.309	Amphiprion_ocellaris
ENSUMAG00000017542	MBD4	86	44.422	ENSAPEG00000016131	mbd4	95	44.289	Amphiprion_percula
ENSUMAG00000017542	MBD4	86	44.200	ENSATEG00000014594	MBD4	86	44.200	Anabas_testudineus
ENSUMAG00000017542	MBD4	100	72.743	ENSBTAG00000021645	MBD4	100	72.743	Bos_taurus
ENSUMAG00000017542	MBD4	100	76.148	ENSCJAG00000017293	MBD4	99	76.148	Callithrix_jacchus
ENSUMAG00000017542	MBD4	100	87.654	ENSCAFG00000004867	MBD4	99	87.654	Canis_familiaris
ENSUMAG00000017542	MBD4	100	87.654	ENSCAFG00020007082	MBD4	99	87.654	Canis_lupus_dingo
ENSUMAG00000017542	MBD4	100	72.920	ENSCHIG00000009760	MBD4	100	72.920	Capra_hircus
ENSUMAG00000017542	MBD4	100	75.784	ENSCCAG00000029796	MBD4	99	75.784	Cebus_capucinus
ENSUMAG00000017542	MBD4	100	76.440	ENSCATG00000035211	MBD4	99	76.440	Cercocebus_atys
ENSUMAG00000017542	MBD4	100	69.634	ENSCLAG00000008974	MBD4	100	69.634	Chinchilla_lanigera
ENSUMAG00000017542	MBD4	100	76.265	ENSCSAG00000009037	MBD4	99	76.265	Chlorocebus_sabaeus
ENSUMAG00000017542	MBD4	87	50.781	ENSCPBG00000014704	MBD4	89	50.781	Chrysemys_picta_bellii
ENSUMAG00000017542	MBD4	100	76.265	ENSCANG00000007120	MBD4	99	76.265	Colobus_angolensis_palliatus
ENSUMAG00000017542	MBD4	100	66.549	ENSCGRG00001003507	Mbd4	100	66.549	Cricetulus_griseus_chok1gshd
ENSUMAG00000017542	MBD4	100	66.549	ENSCGRG00000010974	Mbd4	100	66.549	Cricetulus_griseus_crigri
ENSUMAG00000017542	MBD4	100	76.091	ENSDNOG00000049619	MBD4	100	76.091	Dasypus_novemcinctus
ENSUMAG00000017542	MBD4	81	62.232	ENSDORG00000000902	-	98	61.378	Dipodomys_ordii
ENSUMAG00000017542	MBD4	100	80.769	ENSEASG00005014800	MBD4	100	80.769	Equus_asinus_asinus
ENSUMAG00000017542	MBD4	100	80.769	ENSECAG00000022106	MBD4	100	80.769	Equus_caballus
ENSUMAG00000017542	MBD4	96	64.416	ENSEEUG00000011459	MBD4	99	64.416	Erinaceus_europaeus
ENSUMAG00000017542	MBD4	100	85.512	ENSFCAG00000000083	MBD4	99	85.512	Felis_catus
ENSUMAG00000017542	MBD4	82	43.750	ENSFALG00000013663	MBD4	99	43.952	Ficedula_albicollis
ENSUMAG00000017542	MBD4	87	50.781	ENSGAGG00000018644	MBD4	89	50.781	Gopherus_agassizii
ENSUMAG00000017542	MBD4	100	77.739	ENSGGOG00000010698	MBD4	99	77.739	Gorilla_gorilla
ENSUMAG00000017542	MBD4	100	71.030	ENSHGLG00000009034	MBD4	100	71.030	Heterocephalus_glaber_female
ENSUMAG00000017542	MBD4	100	71.204	ENSHGLG00100000135	MBD4	100	71.204	Heterocephalus_glaber_male
ENSUMAG00000017542	MBD4	100	72.077	ENSSTOG00000020663	MBD4	100	72.077	Ictidomys_tridecemlineatus
ENSUMAG00000017542	MBD4	99	74.479	ENSLAFG00000010609	MBD4	99	74.479	Loxodonta_africana
ENSUMAG00000017542	MBD4	99	76.399	ENSMFAG00000002266	MBD4	99	76.399	Macaca_fascicularis
ENSUMAG00000017542	MBD4	99	76.132	ENSMMUG00000012723	MBD4	99	76.132	Macaca_mulatta
ENSUMAG00000017542	MBD4	96	75.455	ENSMNEG00000029752	MBD4	99	75.365	Macaca_nemestrina
ENSUMAG00000017542	MBD4	100	76.265	ENSMLEG00000024859	MBD4	99	76.265	Mandrillus_leucophaeus
ENSUMAG00000017542	MBD4	100	77.661	ENSMICG00000008022	MBD4	99	77.661	Microcebus_murinus
ENSUMAG00000017542	MBD4	66	49.206	ENSMOCG00000002466	-	95	49.206	Microtus_ochrogaster
ENSUMAG00000017542	MBD4	87	60.120	ENSMODG00000006399	-	99	60.120	Monodelphis_domestica
ENSUMAG00000017542	MBD4	100	66.783	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.783	Mus_caroli
ENSUMAG00000017542	MBD4	100	66.087	ENSMUSG00000030322	Mbd4	100	66.087	Mus_musculus
ENSUMAG00000017542	MBD4	100	66.783	MGP_PahariEiJ_G0022511	-	100	66.783	Mus_pahari
ENSUMAG00000017542	MBD4	100	65.913	MGP_SPRETEiJ_G0029788	Mbd4	100	65.913	Mus_spretus
ENSUMAG00000017542	MBD4	100	87.633	ENSMPUG00000017195	MBD4	99	87.633	Mustela_putorius_furo
ENSUMAG00000017542	MBD4	94	82.070	ENSMLUG00000014766	MBD4	99	82.070	Myotis_lucifugus
ENSUMAG00000017542	MBD4	100	78.360	ENSNLEG00000005337	MBD4	99	78.360	Nomascus_leucogenys
ENSUMAG00000017542	MBD4	100	63.415	ENSOPRG00000000473	MBD4	99	63.415	Ochotona_princeps
ENSUMAG00000017542	MBD4	86	41.270	ENSONIG00000017212	mbd4	100	41.270	Oreochromis_niloticus
ENSUMAG00000017542	MBD4	71	44.686	ENSOANG00000004589	-	97	43.823	Ornithorhynchus_anatinus
ENSUMAG00000017542	MBD4	100	66.724	ENSOCUG00000013006	MBD4	99	66.724	Oryctolagus_cuniculus
ENSUMAG00000017542	MBD4	100	71.030	ENSOGAG00000010236	MBD4	100	71.030	Otolemur_garnettii
ENSUMAG00000017542	MBD4	100	73.274	ENSOARG00000014699	MBD4	100	73.274	Ovis_aries
ENSUMAG00000017542	MBD4	100	78.087	ENSPPAG00000036528	MBD4	99	78.087	Pan_paniscus
ENSUMAG00000017542	MBD4	100	84.276	ENSPPRG00000016480	MBD4	99	84.276	Panthera_pardus
ENSUMAG00000017542	MBD4	100	78.435	ENSPTRG00000015377	MBD4	99	78.435	Pan_troglodytes
ENSUMAG00000017542	MBD4	100	76.963	ENSPANG00000015047	MBD4	99	76.963	Papio_anubis
ENSUMAG00000017542	MBD4	90	49.722	ENSPSIG00000007892	MBD4	91	49.722	Pelodiscus_sinensis
ENSUMAG00000017542	MBD4	94	58.965	ENSPEMG00000006226	Mbd4	99	59.300	Peromyscus_maniculatus_bairdii
ENSUMAG00000017542	MBD4	90	58.140	ENSPCIG00000002276	-	98	58.140	Phascolarctos_cinereus
ENSUMAG00000017542	MBD4	100	78.049	ENSPPYG00000013417	MBD4	99	78.049	Pongo_abelii
ENSUMAG00000017542	MBD4	96	71.220	ENSPCAG00000012915	MBD4	99	71.220	Procavia_capensis
ENSUMAG00000017542	MBD4	100	81.501	ENSPVAG00000005238	MBD4	99	81.501	Pteropus_vampyrus
ENSUMAG00000017542	MBD4	100	65.391	ENSRNOG00000010919	Mbd4	100	65.391	Rattus_norvegicus
ENSUMAG00000017542	MBD4	100	76.614	ENSRBIG00000027722	MBD4	99	76.614	Rhinopithecus_bieti
ENSUMAG00000017542	MBD4	100	76.440	ENSRROG00000029136	MBD4	99	76.440	Rhinopithecus_roxellana
ENSUMAG00000017542	MBD4	100	76.049	ENSSBOG00000016810	MBD4	99	76.049	Saimiri_boliviensis_boliviensis
ENSUMAG00000017542	MBD4	95	56.673	ENSSHAG00000012953	MBD4	96	56.673	Sarcophilus_harrisii
ENSUMAG00000017542	MBD4	86	43.089	ENSSFOG00015016292	mbd4	95	43.089	Scleropages_formosus
ENSUMAG00000017542	MBD4	81	60.430	ENSSARG00000004496	-	80	60.430	Sorex_araneus
ENSUMAG00000017542	MBD4	86	52.446	ENSSPUG00000017344	MBD4	91	52.446	Sphenodon_punctatus
ENSUMAG00000017542	MBD4	100	77.312	ENSSSCG00000033303	MBD4	100	77.312	Sus_scrofa
ENSUMAG00000017542	MBD4	87	60.550	ENSTBEG00000003041	-	87	60.550	Tupaia_belangeri
ENSUMAG00000017542	MBD4	95	79.159	ENSTTRG00000011265	MBD4	98	79.159	Tursiops_truncatus
ENSUMAG00000017542	MBD4	87	99.185	ENSUAMG00000000814	MBD4	100	99.185	Ursus_americanus
ENSUMAG00000017542	MBD4	64	73.832	ENSVPAG00000004040	-	67	73.832	Vicugna_pacos
ENSUMAG00000017542	MBD4	100	86.772	ENSVVUG00000014222	MBD4	99	86.772	Vulpes_vulpes