EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000017890 (Gene tree)
Gene ID: 103663214
Gene Symbol: RCL1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 89486 bases
Position: chrKK498595.1:6089262-6178747
Accession: 103663214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000024604	RTC	PF01137.21	6e-42	1	1
ENSUMAP00000024604	RTC_insert	PF05189.13	3.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000029139	RCL1-201	2469	-	ENSUMAP00000024604	336 (aa)	XP_008689140	UPI0004E029C6

Gene Model

Click here to download ENSUMAG00000017890's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000017890's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000017890	RCL1	97	96.636	ENSG00000120158	RCL1	100	96.744	Homo_sapiens
ENSUMAG00000017890	RCL1	97	81.402	ENSAPOG00000015666	rcl1	88	81.402	Acanthochromis_polyacanthus
ENSUMAG00000017890	RCL1	97	99.388	ENSAMEG00000002631	RCL1	88	99.388	Ailuropoda_melanoleuca
ENSUMAG00000017890	RCL1	97	79.878	ENSACIG00000021195	rcl1	88	79.878	Amphilophus_citrinellus
ENSUMAG00000017890	RCL1	97	80.183	ENSAOCG00000002223	rcl1	88	80.183	Amphiprion_ocellaris
ENSUMAG00000017890	RCL1	97	80.488	ENSAPEG00000006905	rcl1	88	80.488	Amphiprion_percula
ENSUMAG00000017890	RCL1	97	77.982	ENSATEG00000020026	rcl1	88	77.982	Anabas_testudineus
ENSUMAG00000017890	RCL1	97	86.544	ENSAPLG00000006031	RCL1	99	86.544	Anas_platyrhynchos
ENSUMAG00000017890	RCL1	97	85.015	ENSACAG00000003640	RCL1	88	85.015	Anolis_carolinensis
ENSUMAG00000017890	RCL1	97	96.024	ENSANAG00000037372	RCL1	88	96.024	Aotus_nancymaae
ENSUMAG00000017890	RCL1	97	80.488	ENSACLG00000021724	rcl1	88	80.488	Astatotilapia_calliptera
ENSUMAG00000017890	RCL1	97	79.878	ENSAMXG00000033394	rcl1	89	79.878	Astyanax_mexicanus
ENSUMAG00000017890	RCL1	97	45.808	WBGene00022852	ZK1127.5	88	45.808	Caenorhabditis_elegans
ENSUMAG00000017890	RCL1	97	96.330	ENSCJAG00000011202	RCL1	88	96.330	Callithrix_jacchus
ENSUMAG00000017890	RCL1	97	97.554	ENSCAFG00000002091	RCL1	88	97.554	Canis_familiaris
ENSUMAG00000017890	RCL1	97	97.554	ENSCAFG00020000638	RCL1	69	97.554	Canis_lupus_dingo
ENSUMAG00000017890	RCL1	97	95.107	ENSCHIG00000012407	RCL1	88	95.107	Capra_hircus
ENSUMAG00000017890	RCL1	97	96.636	ENSTSYG00000009592	RCL1	97	96.685	Carlito_syrichta
ENSUMAG00000017890	RCL1	76	79.191	ENSCAPG00000013575	RCL1	100	79.191	Cavia_aperea
ENSUMAG00000017890	RCL1	97	95.413	ENSCPOG00000015354	RCL1	88	95.413	Cavia_porcellus
ENSUMAG00000017890	RCL1	97	96.330	ENSCCAG00000033505	RCL1	97	96.154	Cebus_capucinus
ENSUMAG00000017890	RCL1	97	96.024	ENSCATG00000034721	RCL1	97	96.685	Cercocebus_atys
ENSUMAG00000017890	RCL1	97	94.801	ENSCLAG00000007445	RCL1	88	94.801	Chinchilla_lanigera
ENSUMAG00000017890	RCL1	97	96.636	ENSCSAG00000008811	RCL1	88	96.636	Chlorocebus_sabaeus
ENSUMAG00000017890	RCL1	82	87.319	ENSCHOG00000007216	RCL1	86	87.319	Choloepus_hoffmanni
ENSUMAG00000017890	RCL1	97	89.297	ENSCPBG00000025481	RCL1	94	89.297	Chrysemys_picta_bellii
ENSUMAG00000017890	RCL1	97	57.100	ENSCING00000019565	-	88	57.100	Ciona_intestinalis
ENSUMAG00000017890	RCL1	97	96.636	ENSCANG00000027099	RCL1	88	96.636	Colobus_angolensis_palliatus
ENSUMAG00000017890	RCL1	97	95.719	ENSCGRG00001013748	Rcl1	88	95.719	Cricetulus_griseus_chok1gshd
ENSUMAG00000017890	RCL1	97	95.719	ENSCGRG00000005843	Rcl1	99	95.719	Cricetulus_griseus_crigri
ENSUMAG00000017890	RCL1	97	79.878	ENSCSEG00000000712	rcl1	86	79.878	Cynoglossus_semilaevis
ENSUMAG00000017890	RCL1	97	82.012	ENSCVAG00000011536	rcl1	88	82.012	Cyprinodon_variegatus
ENSUMAG00000017890	RCL1	97	78.049	ENSDARG00000038312	rcl1	89	78.049	Danio_rerio
ENSUMAG00000017890	RCL1	79	95.849	ENSDNOG00000019911	RCL1	100	95.849	Dasypus_novemcinctus
ENSUMAG00000017890	RCL1	97	96.330	ENSDORG00000015645	Rcl1	88	96.330	Dipodomys_ordii
ENSUMAG00000017890	RCL1	96	53.172	FBgn0020909	Rtc1	86	53.172	Drosophila_melanogaster
ENSUMAG00000017890	RCL1	80	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSUMAG00000017890	RCL1	97	55.488	ENSEBUG00000016621	-	87	55.488	Eptatretus_burgeri
ENSUMAG00000017890	RCL1	97	96.330	ENSEASG00005010653	RCL1	88	96.330	Equus_asinus_asinus
ENSUMAG00000017890	RCL1	97	96.330	ENSECAG00000015973	RCL1	88	96.330	Equus_caballus
ENSUMAG00000017890	RCL1	90	87.129	ENSEEUG00000009801	RCL1	80	87.129	Erinaceus_europaeus
ENSUMAG00000017890	RCL1	97	77.439	ENSELUG00000007353	rcl1	88	77.439	Esox_lucius
ENSUMAG00000017890	RCL1	97	96.636	ENSFCAG00000014557	RCL1	88	96.636	Felis_catus
ENSUMAG00000017890	RCL1	98	87.195	ENSFALG00000010553	RCL1	87	87.195	Ficedula_albicollis
ENSUMAG00000017890	RCL1	97	94.190	ENSFDAG00000004209	RCL1	100	94.190	Fukomys_damarensis
ENSUMAG00000017890	RCL1	97	81.707	ENSFHEG00000011228	rcl1	90	81.707	Fundulus_heteroclitus
ENSUMAG00000017890	RCL1	97	78.963	ENSGMOG00000004677	rcl1	88	78.963	Gadus_morhua
ENSUMAG00000017890	RCL1	97	86.239	ENSGALG00000015024	RCL1	87	86.239	Gallus_gallus
ENSUMAG00000017890	RCL1	97	79.573	ENSGAFG00000007257	rcl1	88	79.573	Gambusia_affinis
ENSUMAG00000017890	RCL1	97	79.878	ENSGACG00000017474	rcl1	88	79.878	Gasterosteus_aculeatus
ENSUMAG00000017890	RCL1	97	89.297	ENSGAGG00000003689	RCL1	88	89.297	Gopherus_agassizii
ENSUMAG00000017890	RCL1	97	96.024	ENSGGOG00000015041	RCL1	97	96.133	Gorilla_gorilla
ENSUMAG00000017890	RCL1	97	80.793	ENSHBUG00000001393	rcl1	88	80.793	Haplochromis_burtoni
ENSUMAG00000017890	RCL1	97	94.801	ENSHGLG00000016452	RCL1	88	94.801	Heterocephalus_glaber_female
ENSUMAG00000017890	RCL1	97	79.511	ENSHGLG00000005368	-	87	78.899	Heterocephalus_glaber_female
ENSUMAG00000017890	RCL1	97	80.428	ENSHGLG00100018010	-	87	79.817	Heterocephalus_glaber_male
ENSUMAG00000017890	RCL1	97	94.801	ENSHGLG00100008718	-	94	94.801	Heterocephalus_glaber_male
ENSUMAG00000017890	RCL1	97	78.963	ENSHCOG00000020170	rcl1	88	78.963	Hippocampus_comes
ENSUMAG00000017890	RCL1	97	79.573	ENSIPUG00000018054	RCL1	89	79.573	Ictalurus_punctatus
ENSUMAG00000017890	RCL1	97	95.107	ENSSTOG00000000023	RCL1	88	95.107	Ictidomys_tridecemlineatus
ENSUMAG00000017890	RCL1	60	71.642	ENSJJAG00000000764	-	95	71.649	Jaculus_jaculus
ENSUMAG00000017890	RCL1	97	95.413	ENSJJAG00000022803	-	88	95.413	Jaculus_jaculus
ENSUMAG00000017890	RCL1	94	87.066	ENSJJAG00000015632	-	85	87.066	Jaculus_jaculus
ENSUMAG00000017890	RCL1	97	79.268	ENSKMAG00000011946	rcl1	88	79.268	Kryptolebias_marmoratus
ENSUMAG00000017890	RCL1	97	81.098	ENSLBEG00000003957	rcl1	93	81.098	Labrus_bergylta
ENSUMAG00000017890	RCL1	89	80.667	ENSLACG00000004594	RCL1	86	85.560	Latimeria_chalumnae
ENSUMAG00000017890	RCL1	97	83.486	ENSLOCG00000010148	rcl1	87	83.486	Lepisosteus_oculatus
ENSUMAG00000017890	RCL1	97	93.272	ENSLAFG00000017495	RCL1	88	93.272	Loxodonta_africana
ENSUMAG00000017890	RCL1	97	96.636	ENSMFAG00000037906	RCL1	88	96.636	Macaca_fascicularis
ENSUMAG00000017890	RCL1	97	96.636	ENSMNEG00000012288	RCL1	97	96.685	Macaca_nemestrina
ENSUMAG00000017890	RCL1	97	96.636	ENSMLEG00000043088	RCL1	88	96.636	Mandrillus_leucophaeus
ENSUMAG00000017890	RCL1	97	80.488	ENSMAMG00000008311	rcl1	88	80.488	Mastacembelus_armatus
ENSUMAG00000017890	RCL1	97	80.488	ENSMZEG00005017292	rcl1	88	80.488	Maylandia_zebra
ENSUMAG00000017890	RCL1	64	84.018	ENSMGAG00000002245	RCL1	97	83.962	Meleagris_gallopavo
ENSUMAG00000017890	RCL1	64	96.744	ENSMAUG00000008922	Rcl1	100	96.744	Mesocricetus_auratus
ENSUMAG00000017890	RCL1	97	95.413	ENSMICG00000015562	RCL1	88	95.413	Microcebus_murinus
ENSUMAG00000017890	RCL1	97	96.330	ENSMOCG00000012145	Rcl1	88	96.330	Microtus_ochrogaster
ENSUMAG00000017890	RCL1	97	76.900	ENSMMOG00000021264	rcl1	88	76.900	Mola_mola
ENSUMAG00000017890	RCL1	92	93.528	ENSMODG00000015377	RCL1	82	93.528	Monodelphis_domestica
ENSUMAG00000017890	RCL1	97	78.963	ENSMALG00000018618	rcl1	88	78.963	Monopterus_albus
ENSUMAG00000017890	RCL1	97	96.636	MGP_CAROLIEiJ_G0022853	Rcl1	88	96.636	Mus_caroli
ENSUMAG00000017890	RCL1	97	96.024	ENSMUSG00000024785	Rcl1	88	96.024	Mus_musculus
ENSUMAG00000017890	RCL1	97	96.024	MGP_PahariEiJ_G0014346	Rcl1	100	97.059	Mus_pahari
ENSUMAG00000017890	RCL1	97	95.719	MGP_SPRETEiJ_G0023771	Rcl1	100	96.471	Mus_spretus
ENSUMAG00000017890	RCL1	97	98.471	ENSMPUG00000004998	RCL1	88	98.471	Mustela_putorius_furo
ENSUMAG00000017890	RCL1	97	95.719	ENSMLUG00000009654	RCL1	88	95.719	Myotis_lucifugus
ENSUMAG00000017890	RCL1	97	96.024	ENSNGAG00000015327	Rcl1	88	96.024	Nannospalax_galili
ENSUMAG00000017890	RCL1	97	79.573	ENSNBRG00000019854	rcl1	90	79.573	Neolamprologus_brichardi
ENSUMAG00000017890	RCL1	97	92.966	ENSNLEG00000008891	RCL1	87	92.966	Nomascus_leucogenys
ENSUMAG00000017890	RCL1	90	93.399	ENSMEUG00000007653	RCL1	81	93.399	Notamacropus_eugenii
ENSUMAG00000017890	RCL1	97	95.107	ENSOPRG00000010965	RCL1	88	95.107	Ochotona_princeps
ENSUMAG00000017890	RCL1	99	77.679	ENSODEG00000004151	RCL1	97	78.614	Octodon_degus
ENSUMAG00000017890	RCL1	97	80.183	ENSONIG00000003871	rcl1	88	80.183	Oreochromis_niloticus
ENSUMAG00000017890	RCL1	74	86.166	ENSOANG00000013193	-	100	86.166	Ornithorhynchus_anatinus
ENSUMAG00000017890	RCL1	97	96.330	ENSOCUG00000008161	RCL1	88	96.330	Oryctolagus_cuniculus
ENSUMAG00000017890	RCL1	97	78.049	ENSORLG00000010443	rcl1	88	78.049	Oryzias_latipes
ENSUMAG00000017890	RCL1	97	78.049	ENSORLG00020012211	rcl1	88	78.049	Oryzias_latipes_hni
ENSUMAG00000017890	RCL1	97	77.744	ENSORLG00015001122	rcl1	88	77.744	Oryzias_latipes_hsok
ENSUMAG00000017890	RCL1	97	79.573	ENSOMEG00000022976	rcl1	77	79.573	Oryzias_melastigma
ENSUMAG00000017890	RCL1	97	95.107	ENSOGAG00000007480	RCL1	88	95.107	Otolemur_garnettii
ENSUMAG00000017890	RCL1	97	95.413	ENSOARG00000013463	RCL1	88	95.413	Ovis_aries
ENSUMAG00000017890	RCL1	97	96.636	ENSPPAG00000037958	RCL1	88	96.636	Pan_paniscus
ENSUMAG00000017890	RCL1	97	96.319	ENSPPRG00000022645	RCL1	96	94.382	Panthera_pardus
ENSUMAG00000017890	RCL1	97	96.626	ENSPTIG00000019031	RCL1	97	95.192	Panthera_tigris_altaica
ENSUMAG00000017890	RCL1	97	96.330	ENSPTRG00000020743	RCL1	97	96.685	Pan_troglodytes
ENSUMAG00000017890	RCL1	97	96.636	ENSPANG00000025151	RCL1	88	96.636	Papio_anubis
ENSUMAG00000017890	RCL1	97	80.183	ENSPKIG00000021022	rcl1	88	80.183	Paramormyrops_kingsleyae
ENSUMAG00000017890	RCL1	97	89.297	ENSPSIG00000012302	RCL1	99	89.297	Pelodiscus_sinensis
ENSUMAG00000017890	RCL1	97	78.049	ENSPMGG00000024007	rcl1	88	78.049	Periophthalmus_magnuspinnatus
ENSUMAG00000017890	RCL1	97	96.942	ENSPEMG00000023275	Rcl1	88	96.942	Peromyscus_maniculatus_bairdii
ENSUMAG00000017890	RCL1	90	31.046	ENSPMAG00000009110	rtca	80	31.046	Petromyzon_marinus
ENSUMAG00000017890	RCL1	53	68.156	ENSPMAG00000005419	-	95	68.156	Petromyzon_marinus
ENSUMAG00000017890	RCL1	98	93.902	ENSPCIG00000000188	RCL1	93	93.902	Phascolarctos_cinereus
ENSUMAG00000017890	RCL1	97	80.488	ENSPFOG00000019682	rcl1	87	80.488	Poecilia_formosa
ENSUMAG00000017890	RCL1	97	80.488	ENSPLAG00000022354	rcl1	88	80.488	Poecilia_latipinna
ENSUMAG00000017890	RCL1	97	80.488	ENSPMEG00000008131	rcl1	88	80.488	Poecilia_mexicana
ENSUMAG00000017890	RCL1	97	79.878	ENSPREG00000008032	rcl1	88	79.878	Poecilia_reticulata
ENSUMAG00000017890	RCL1	97	96.330	ENSPPYG00000019244	RCL1	88	96.330	Pongo_abelii
ENSUMAG00000017890	RCL1	97	85.583	ENSPCAG00000001440	RCL1	88	85.583	Procavia_capensis
ENSUMAG00000017890	RCL1	97	96.636	ENSPCOG00000009611	RCL1	97	96.685	Propithecus_coquereli
ENSUMAG00000017890	RCL1	97	96.636	ENSPVAG00000015752	RCL1	88	96.636	Pteropus_vampyrus
ENSUMAG00000017890	RCL1	97	80.488	ENSPNYG00000012910	rcl1	88	80.488	Pundamilia_nyererei
ENSUMAG00000017890	RCL1	97	80.488	ENSPNAG00000028307	rcl1	81	80.488	Pygocentrus_nattereri
ENSUMAG00000017890	RCL1	97	95.719	ENSRNOG00000015491	Rcl1	88	95.719	Rattus_norvegicus
ENSUMAG00000017890	RCL1	97	96.330	ENSRBIG00000035818	RCL1	88	96.330	Rhinopithecus_bieti
ENSUMAG00000017890	RCL1	97	96.636	ENSRROG00000029781	RCL1	97	96.685	Rhinopithecus_roxellana
ENSUMAG00000017890	RCL1	97	34.036	YOL010W	-	87	34.036	Saccharomyces_cerevisiae
ENSUMAG00000017890	RCL1	97	96.024	ENSSBOG00000026369	RCL1	97	96.703	Saimiri_boliviensis_boliviensis
ENSUMAG00000017890	RCL1	98	91.793	ENSSHAG00000014086	RCL1	99	91.793	Sarcophilus_harrisii
ENSUMAG00000017890	RCL1	97	81.098	ENSSFOG00015023020	rcl1	88	81.098	Scleropages_formosus
ENSUMAG00000017890	RCL1	97	80.183	ENSSMAG00000019751	rcl1	76	80.183	Scophthalmus_maximus
ENSUMAG00000017890	RCL1	97	80.488	ENSSDUG00000006349	rcl1	88	80.488	Seriola_dumerili
ENSUMAG00000017890	RCL1	97	80.793	ENSSLDG00000022076	rcl1	88	80.793	Seriola_lalandi_dorsalis
ENSUMAG00000017890	RCL1	97	96.636	ENSSARG00000009260	RCL1	88	96.636	Sorex_araneus
ENSUMAG00000017890	RCL1	97	88.073	ENSSPUG00000016330	RCL1	88	88.073	Sphenodon_punctatus
ENSUMAG00000017890	RCL1	97	81.098	ENSSPAG00000018038	rcl1	88	81.098	Stegastes_partitus
ENSUMAG00000017890	RCL1	97	97.248	ENSSSCG00000005217	RCL1	73	97.248	Sus_scrofa
ENSUMAG00000017890	RCL1	97	85.714	ENSTGUG00000005138	RCL1	88	85.714	Taeniopygia_guttata
ENSUMAG00000017890	RCL1	97	80.183	ENSTRUG00000010493	rcl1	88	80.183	Takifugu_rubripes
ENSUMAG00000017890	RCL1	97	78.354	ENSTNIG00000013214	rcl1	88	78.354	Tetraodon_nigroviridis
ENSUMAG00000017890	RCL1	97	88.685	ENSTBEG00000016339	RCL1	88	88.685	Tupaia_belangeri
ENSUMAG00000017890	RCL1	97	95.719	ENSTTRG00000016525	RCL1	88	95.719	Tursiops_truncatus
ENSUMAG00000017890	RCL1	97	99.388	ENSUAMG00000005598	RCL1	88	99.388	Ursus_americanus
ENSUMAG00000017890	RCL1	97	97.554	ENSVPAG00000009188	RCL1	100	97.554	Vicugna_pacos
ENSUMAG00000017890	RCL1	97	97.554	ENSVVUG00000007304	RCL1	88	97.554	Vulpes_vulpes
ENSUMAG00000017890	RCL1	97	76.829	ENSXETG00000000592	rcl1	88	76.829	Xenopus_tropicalis
ENSUMAG00000017890	RCL1	97	80.488	ENSXCOG00000004922	rcl1	88	80.488	Xiphophorus_couchianus
ENSUMAG00000017890	RCL1	97	80.488	ENSXMAG00000022366	RCL1	88	80.488	Xiphophorus_maculatus