EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000018187 (Gene tree)
Gene ID: 103663326
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 167490 bases
Position: chrKK498595.1:7613302-7780791
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000025220	MTS	PF05175.14	2.2e-05	1	1
ENSUMAP00000025229	MTS	PF05175.14	2.2e-05	1	1
ENSUMAP00000025280	MTS	PF05175.14	2.3e-05	1	1
ENSUMAP00000025257	MTS	PF05175.14	2.8e-05	1	1
ENSUMAP00000025250	MTS	PF05175.14	2.8e-05	1	1
ENSUMAP00000025275	MTS	PF05175.14	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000029859	-	1341	-	ENSUMAP00000025229	446 (aa)	-	-
ENSUMAT00000029848	-	1338	-	ENSUMAP00000025220	445 (aa)	-	-
ENSUMAT00000029914	-	1374	-	ENSUMAP00000025280	457 (aa)	-	-
ENSUMAT00000029882	-	1476	-	ENSUMAP00000025250	491 (aa)	-	-
ENSUMAT00000029891	-	1491	-	ENSUMAP00000025257	496 (aa)	-	-
ENSUMAT00000029909	-	1614	-	ENSUMAP00000025275	537 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000018187's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr01522	Endocrine resistance	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000018187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000018187	-	75	34.328	ENSUMAG00000020026	PRMT3	67	35.759
ENSUMAG00000018187	-	69	33.121	ENSUMAG00000014737	PRMT8	95	33.121
ENSUMAG00000018187	-	52	36.481	ENSUMAG00000002599	PRMT1	78	36.481
ENSUMAG00000018187	-	67	37.377	ENSUMAG00000025033	PRMT2	69	37.662
ENSUMAG00000018187	-	92	66.504	ENSUMAG00000024981	CARM1	74	66.504

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000018187	-	92	60.488	ENSAPOG00000020684	carm1l	89	60.437	Acanthochromis_polyacanthus
ENSUMAG00000018187	-	91	59.653	ENSACIG00000024292	-	93	59.214	Amphilophus_citrinellus
ENSUMAG00000018187	-	89	61.713	ENSAOCG00000016803	carm1l	91	61.153	Amphiprion_ocellaris
ENSUMAG00000018187	-	90	61.194	ENSAPEG00000011757	carm1l	86	61.194	Amphiprion_percula
ENSUMAG00000018187	-	92	83.619	ENSACAG00000003227	-	89	85.075	Anolis_carolinensis
ENSUMAG00000018187	-	90	60.476	ENSACLG00000009998	-	87	59.353	Astatotilapia_calliptera
ENSUMAG00000018187	-	90	71.322	ENSAMXG00000020903	carm1l	88	71.144	Astyanax_mexicanus
ENSUMAG00000018187	-	71	96.815	ENSCAFG00000002042	-	100	96.519	Canis_familiaris
ENSUMAG00000018187	-	90	87.811	ENSCPBG00000025471	-	79	87.811	Chrysemys_picta_bellii
ENSUMAG00000018187	-	90	69.250	ENSDARG00000091531	carm1l	88	69.250	Danio_rerio
ENSUMAG00000018187	-	90	93.035	ENSEASG00005010358	-	87	93.035	Equus_asinus_asinus
ENSUMAG00000018187	-	90	93.284	ENSECAG00000009736	-	87	93.284	Equus_caballus
ENSUMAG00000018187	-	90	87.811	ENSGAGG00000021536	-	79	87.811	Gopherus_agassizii
ENSUMAG00000018187	-	98	59.132	ENSHBUG00000022386	-	95	59.132	Haplochromis_burtoni
ENSUMAG00000018187	-	90	83.333	ENSHGLG00000019207	-	87	83.333	Heterocephalus_glaber_female
ENSUMAG00000018187	-	90	70.574	ENSIPUG00000024779	co-prmt	96	70.123	Ictalurus_punctatus
ENSUMAG00000018187	-	90	74.065	ENSLOCG00000012543	carm1l	87	74.065	Lepisosteus_oculatus
ENSUMAG00000018187	-	91	60.247	ENSMAMG00000000357	carm1l	91	60.794	Mastacembelus_armatus
ENSUMAG00000018187	-	89	62.406	ENSMZEG00005021030	-	99	62.095	Maylandia_zebra
ENSUMAG00000018187	-	92	87.286	ENSMICG00000029542	-	87	88.806	Microcebus_murinus
ENSUMAG00000018187	-	81	92.798	ENSMLUG00000022735	-	100	92.798	Myotis_lucifugus
ENSUMAG00000018187	-	91	59.753	ENSNBRG00000013194	-	95	59.314	Neolamprologus_brichardi
ENSUMAG00000018187	-	92	61.800	ENSONIG00000016604	-	89	61.800	Oreochromis_niloticus
ENSUMAG00000018187	-	92	55.854	ENSOMEG00000011226	-	78	55.802	Oryzias_melastigma
ENSUMAG00000018187	-	90	94.015	ENSPPRG00000000748	-	86	93.827	Panthera_pardus
ENSUMAG00000018187	-	91	94.321	ENSPTIG00000021167	-	91	94.527	Panthera_tigris_altaica
ENSUMAG00000018187	-	94	67.606	ENSPKIG00000022185	carm1l	93	67.606	Paramormyrops_kingsleyae
ENSUMAG00000018187	-	71	89.490	ENSPSIG00000017939	-	100	89.241	Pelodiscus_sinensis
ENSUMAG00000018187	-	82	85.950	ENSPCIG00000030606	-	96	88.000	Phascolarctos_cinereus
ENSUMAG00000018187	-	89	62.406	ENSPNYG00000016436	-	99	62.095	Pundamilia_nyererei
ENSUMAG00000018187	-	90	65.287	ENSPNAG00000026491	carm1l	89	65.068	Pygocentrus_nattereri
ENSUMAG00000018187	-	71	88.217	ENSSHAG00000002395	-	100	87.975	Sarcophilus_harrisii
ENSUMAG00000018187	-	90	70.075	ENSSFOG00015018872	carm1l	88	69.802	Scleropages_formosus
ENSUMAG00000018187	-	91	62.716	ENSSDUG00000018596	-	88	63.476	Seriola_dumerili
ENSUMAG00000018187	-	91	62.624	ENSSLDG00000013596	carm1l	90	62.069	Seriola_lalandi_dorsalis
ENSUMAG00000018187	-	90	86.466	ENSSPUG00000001722	-	88	86.466	Sphenodon_punctatus
ENSUMAG00000018187	-	92	57.674	ENSSPAG00000003543	carm1l	90	57.674	Stegastes_partitus
ENSUMAG00000018187	-	90	91.542	ENSSSCG00000039823	-	81	91.542	Sus_scrofa
ENSUMAG00000018187	-	54	51.822	ENSTRUG00000020502	-	74	52.720	Takifugu_rubripes
ENSUMAG00000018187	-	91	96.040	ENSVVUG00000006545	-	99	94.417	Vulpes_vulpes