EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000018317 (Gene tree)
Gene ID: 103666119
Gene Symbol: CLP1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 3279 bases
Position: chrKK498612.1:2060070-2063348
Accession: 103666119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000025133	Clp1	PF06807.14	1.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000029752	CLP1-201	2117	-	ENSUMAP00000025133	425 (aa)	XP_008692366	UPI00004BCCCE

Gene Model

Click here to download ENSUMAG00000018317's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000018317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000018317	CLP1	100	99.529	ENSG00000172409	CLP1	100	99.529	Homo_sapiens
ENSUMAG00000018317	CLP1	98	76.651	ENSAPOG00000008242	clp1	96	76.651	Acanthochromis_polyacanthus
ENSUMAG00000018317	CLP1	100	100.000	ENSAMEG00000014551	CLP1	98	100.000	Ailuropoda_melanoleuca
ENSUMAG00000018317	CLP1	98	75.943	ENSACIG00000006310	clp1	95	75.943	Amphilophus_citrinellus
ENSUMAG00000018317	CLP1	100	75.289	ENSAOCG00000010681	clp1	100	75.289	Amphiprion_ocellaris
ENSUMAG00000018317	CLP1	98	76.651	ENSAPEG00000012165	clp1	99	76.651	Amphiprion_percula
ENSUMAG00000018317	CLP1	99	76.102	ENSATEG00000012374	clp1	98	76.102	Anabas_testudineus
ENSUMAG00000018317	CLP1	100	93.882	ENSACAG00000007139	CLP1	100	93.882	Anolis_carolinensis
ENSUMAG00000018317	CLP1	100	99.529	ENSANAG00000034935	CLP1	100	99.529	Aotus_nancymaae
ENSUMAG00000018317	CLP1	99	75.174	ENSACLG00000013573	clp1	98	75.174	Astatotilapia_calliptera
ENSUMAG00000018317	CLP1	97	78.860	ENSAMXG00000014194	clp1	98	78.860	Astyanax_mexicanus
ENSUMAG00000018317	CLP1	100	100.000	ENSBTAG00000006493	CLP1	100	100.000	Bos_taurus
ENSUMAG00000018317	CLP1	96	47.962	WBGene00010304	clpf-1	97	47.962	Caenorhabditis_elegans
ENSUMAG00000018317	CLP1	100	99.529	ENSCJAG00000008748	CLP1	100	99.529	Callithrix_jacchus
ENSUMAG00000018317	CLP1	100	100.000	ENSCAFG00000007815	CLP1	100	100.000	Canis_familiaris
ENSUMAG00000018317	CLP1	100	100.000	ENSCAFG00020000903	CLP1	100	100.000	Canis_lupus_dingo
ENSUMAG00000018317	CLP1	100	99.294	ENSCHIG00000023497	CLP1	100	99.294	Capra_hircus
ENSUMAG00000018317	CLP1	100	99.529	ENSTSYG00000006824	CLP1	99	99.529	Carlito_syrichta
ENSUMAG00000018317	CLP1	100	99.294	ENSCAPG00000009703	CLP1	100	99.294	Cavia_aperea
ENSUMAG00000018317	CLP1	98	99.519	ENSCPOG00000012554	CLP1	99	99.519	Cavia_porcellus
ENSUMAG00000018317	CLP1	100	99.059	ENSCCAG00000031957	CLP1	100	99.059	Cebus_capucinus
ENSUMAG00000018317	CLP1	100	99.529	ENSCATG00000044628	CLP1	100	99.529	Cercocebus_atys
ENSUMAG00000018317	CLP1	100	99.765	ENSCLAG00000004094	CLP1	100	99.765	Chinchilla_lanigera
ENSUMAG00000018317	CLP1	100	99.529	ENSCSAG00000005994	CLP1	100	99.529	Chlorocebus_sabaeus
ENSUMAG00000018317	CLP1	100	94.353	ENSCPBG00000016843	CLP1	100	94.353	Chrysemys_picta_bellii
ENSUMAG00000018317	CLP1	99	63.270	ENSCING00000003779	-	98	63.270	Ciona_intestinalis
ENSUMAG00000018317	CLP1	99	63.033	ENSCSAVG00000003437	-	99	63.033	Ciona_savignyi
ENSUMAG00000018317	CLP1	100	99.529	ENSCANG00000034335	CLP1	100	99.529	Colobus_angolensis_palliatus
ENSUMAG00000018317	CLP1	100	99.294	ENSCGRG00001002227	CLP1	100	99.294	Cricetulus_griseus_chok1gshd
ENSUMAG00000018317	CLP1	100	99.294	ENSCGRG00000004328	CLP1	100	99.294	Cricetulus_griseus_crigri
ENSUMAG00000018317	CLP1	99	74.478	ENSCSEG00000008614	clp1	98	74.478	Cynoglossus_semilaevis
ENSUMAG00000018317	CLP1	99	75.638	ENSCVAG00000020101	clp1	98	75.638	Cyprinodon_variegatus
ENSUMAG00000018317	CLP1	97	79.714	ENSDARG00000063663	clp1	95	79.714	Danio_rerio
ENSUMAG00000018317	CLP1	99	99.528	ENSDNOG00000042415	CLP1	90	99.528	Dasypus_novemcinctus
ENSUMAG00000018317	CLP1	100	99.529	ENSDORG00000014685	Clp1	100	99.529	Dipodomys_ordii
ENSUMAG00000018317	CLP1	96	56.796	FBgn0033842	cbc	97	56.796	Drosophila_melanogaster
ENSUMAG00000018317	CLP1	100	99.765	ENSETEG00000003009	CLP1	100	99.765	Echinops_telfairi
ENSUMAG00000018317	CLP1	97	72.397	ENSEBUG00000011648	clp1	97	72.397	Eptatretus_burgeri
ENSUMAG00000018317	CLP1	100	99.294	ENSEASG00005002093	CLP1	100	99.294	Equus_asinus_asinus
ENSUMAG00000018317	CLP1	100	99.294	ENSECAG00000011597	CLP1	100	99.294	Equus_caballus
ENSUMAG00000018317	CLP1	100	98.588	ENSEEUG00000012771	CLP1	100	98.588	Erinaceus_europaeus
ENSUMAG00000018317	CLP1	97	79.335	ENSELUG00000024048	clp1	95	79.335	Esox_lucius
ENSUMAG00000018317	CLP1	100	99.765	ENSFCAG00000006633	CLP1	100	99.765	Felis_catus
ENSUMAG00000018317	CLP1	100	92.235	ENSFALG00000011145	CLP1	100	92.235	Ficedula_albicollis
ENSUMAG00000018317	CLP1	100	99.765	ENSFDAG00000000234	CLP1	100	99.765	Fukomys_damarensis
ENSUMAG00000018317	CLP1	99	74.942	ENSFHEG00000014760	CLP1	98	74.942	Fundulus_heteroclitus
ENSUMAG00000018317	CLP1	97	79.665	ENSGMOG00000019340	clp1	95	79.665	Gadus_morhua
ENSUMAG00000018317	CLP1	100	92.941	ENSGALG00000007370	CLP1	100	92.941	Gallus_gallus
ENSUMAG00000018317	CLP1	99	75.406	ENSGAFG00000003020	clp1	99	75.406	Gambusia_affinis
ENSUMAG00000018317	CLP1	99	76.566	ENSGACG00000017832	clp1	98	76.566	Gasterosteus_aculeatus
ENSUMAG00000018317	CLP1	100	94.118	ENSGAGG00000013279	CLP1	100	94.118	Gopherus_agassizii
ENSUMAG00000018317	CLP1	100	99.529	ENSGGOG00000023006	CLP1	100	99.529	Gorilla_gorilla
ENSUMAG00000018317	CLP1	99	75.174	ENSHBUG00000010436	clp1	98	75.174	Haplochromis_burtoni
ENSUMAG00000018317	CLP1	100	99.765	ENSHGLG00000009914	CLP1	100	99.765	Heterocephalus_glaber_female
ENSUMAG00000018317	CLP1	100	99.765	ENSHGLG00100006105	CLP1	100	99.765	Heterocephalus_glaber_male
ENSUMAG00000018317	CLP1	99	76.552	ENSHCOG00000010072	clp1	99	76.552	Hippocampus_comes
ENSUMAG00000018317	CLP1	97	79.524	ENSIPUG00000016238	clp1	94	79.335	Ictalurus_punctatus
ENSUMAG00000018317	CLP1	100	99.765	ENSSTOG00000029257	CLP1	100	99.765	Ictidomys_tridecemlineatus
ENSUMAG00000018317	CLP1	100	99.294	ENSJJAG00000023691	Clp1	100	99.294	Jaculus_jaculus
ENSUMAG00000018317	CLP1	99	74.942	ENSKMAG00000011990	clp1	98	74.942	Kryptolebias_marmoratus
ENSUMAG00000018317	CLP1	99	76.334	ENSLBEG00000010201	clp1	98	76.334	Labrus_bergylta
ENSUMAG00000018317	CLP1	100	85.412	ENSLACG00000003160	CLP1	100	85.412	Latimeria_chalumnae
ENSUMAG00000018317	CLP1	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSUMAG00000018317	CLP1	100	99.529	ENSLAFG00000014907	CLP1	100	99.529	Loxodonta_africana
ENSUMAG00000018317	CLP1	100	99.529	ENSMFAG00000046074	CLP1	100	99.529	Macaca_fascicularis
ENSUMAG00000018317	CLP1	100	99.529	ENSMMUG00000038007	CLP1	99	99.529	Macaca_mulatta
ENSUMAG00000018317	CLP1	100	99.529	ENSMNEG00000000259	CLP1	100	99.529	Macaca_nemestrina
ENSUMAG00000018317	CLP1	100	99.529	ENSMLEG00000043556	CLP1	100	99.529	Mandrillus_leucophaeus
ENSUMAG00000018317	CLP1	100	75.520	ENSMAMG00000002149	clp1	98	75.520	Mastacembelus_armatus
ENSUMAG00000018317	CLP1	99	75.174	ENSMZEG00005002850	clp1	98	75.174	Maylandia_zebra
ENSUMAG00000018317	CLP1	100	92.941	ENSMGAG00000009643	CLP1	100	92.941	Meleagris_gallopavo
ENSUMAG00000018317	CLP1	100	98.588	ENSMAUG00000016261	Clp1	100	98.588	Mesocricetus_auratus
ENSUMAG00000018317	CLP1	100	100.000	ENSMICG00000004895	CLP1	100	100.000	Microcebus_murinus
ENSUMAG00000018317	CLP1	100	99.529	ENSMOCG00000005498	Clp1	100	99.529	Microtus_ochrogaster
ENSUMAG00000018317	CLP1	98	78.066	ENSMMOG00000003229	clp1	96	78.066	Mola_mola
ENSUMAG00000018317	CLP1	100	97.882	ENSMODG00000020107	-	100	97.882	Monodelphis_domestica
ENSUMAG00000018317	CLP1	100	97.882	ENSMODG00000024148	-	100	97.882	Monodelphis_domestica
ENSUMAG00000018317	CLP1	99	74.943	ENSMALG00000014239	clp1	99	74.943	Monopterus_albus
ENSUMAG00000018317	CLP1	100	99.059	MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	Mus_caroli
ENSUMAG00000018317	CLP1	100	99.059	ENSMUSG00000027079	Clp1	100	99.059	Mus_musculus
ENSUMAG00000018317	CLP1	100	98.824	MGP_PahariEiJ_G0025177	Clp1	100	98.824	Mus_pahari
ENSUMAG00000018317	CLP1	100	99.059	MGP_SPRETEiJ_G0024646	Clp1	100	99.059	Mus_spretus
ENSUMAG00000018317	CLP1	100	100.000	ENSMPUG00000000268	CLP1	100	100.000	Mustela_putorius_furo
ENSUMAG00000018317	CLP1	100	99.059	ENSMLUG00000007904	CLP1	100	99.059	Myotis_lucifugus
ENSUMAG00000018317	CLP1	100	99.765	ENSNGAG00000006165	Clp1	100	99.765	Nannospalax_galili
ENSUMAG00000018317	CLP1	99	75.174	ENSNBRG00000005225	clp1	98	75.174	Neolamprologus_brichardi
ENSUMAG00000018317	CLP1	82	95.960	ENSNLEG00000012809	-	100	95.960	Nomascus_leucogenys
ENSUMAG00000018317	CLP1	100	97.882	ENSMEUG00000010949	CLP1	99	97.882	Notamacropus_eugenii
ENSUMAG00000018317	CLP1	70	99.329	ENSOPRG00000007329	CLP1	100	99.329	Ochotona_princeps
ENSUMAG00000018317	CLP1	100	99.765	ENSODEG00000011410	CLP1	100	99.765	Octodon_degus
ENSUMAG00000018317	CLP1	99	74.942	ENSONIG00000005089	clp1	98	74.942	Oreochromis_niloticus
ENSUMAG00000018317	CLP1	100	99.529	ENSOCUG00000007045	CLP1	100	99.529	Oryctolagus_cuniculus
ENSUMAG00000018317	CLP1	99	74.478	ENSORLG00000003647	clp1	98	74.478	Oryzias_latipes
ENSUMAG00000018317	CLP1	99	74.246	ENSORLG00020016676	clp1	98	74.246	Oryzias_latipes_hni
ENSUMAG00000018317	CLP1	99	74.478	ENSORLG00015019484	clp1	98	74.478	Oryzias_latipes_hsok
ENSUMAG00000018317	CLP1	99	74.942	ENSOMEG00000021303	clp1	98	74.942	Oryzias_melastigma
ENSUMAG00000018317	CLP1	100	99.765	ENSOGAG00000004508	CLP1	100	99.765	Otolemur_garnettii
ENSUMAG00000018317	CLP1	100	98.353	ENSOARG00000010145	CLP1	98	98.353	Ovis_aries
ENSUMAG00000018317	CLP1	100	99.529	ENSPPAG00000041519	CLP1	100	99.529	Pan_paniscus
ENSUMAG00000018317	CLP1	100	99.765	ENSPPRG00000006135	CLP1	100	99.765	Panthera_pardus
ENSUMAG00000018317	CLP1	100	99.765	ENSPTIG00000015866	CLP1	100	99.765	Panthera_tigris_altaica
ENSUMAG00000018317	CLP1	100	99.529	ENSPTRG00000047318	CLP1	100	99.529	Pan_troglodytes
ENSUMAG00000018317	CLP1	100	99.529	ENSPANG00000017078	CLP1	97	99.529	Papio_anubis
ENSUMAG00000018317	CLP1	97	80.387	ENSPKIG00000007697	clp1	94	80.387	Paramormyrops_kingsleyae
ENSUMAG00000018317	CLP1	95	91.791	ENSPSIG00000005468	CLP1	100	91.791	Pelodiscus_sinensis
ENSUMAG00000018317	CLP1	99	76.267	ENSPMGG00000012171	clp1	99	76.267	Periophthalmus_magnuspinnatus
ENSUMAG00000018317	CLP1	100	99.529	ENSPEMG00000011213	-	100	99.529	Peromyscus_maniculatus_bairdii
ENSUMAG00000018317	CLP1	100	76.056	ENSPMAG00000006707	clp1	100	76.056	Petromyzon_marinus
ENSUMAG00000018317	CLP1	100	97.412	ENSPCIG00000011899	CLP1	99	97.412	Phascolarctos_cinereus
ENSUMAG00000018317	CLP1	99	74.942	ENSPFOG00000008169	clp1	98	74.942	Poecilia_formosa
ENSUMAG00000018317	CLP1	99	74.942	ENSPLAG00000022388	clp1	99	74.942	Poecilia_latipinna
ENSUMAG00000018317	CLP1	99	74.942	ENSPMEG00000021088	clp1	99	74.942	Poecilia_mexicana
ENSUMAG00000018317	CLP1	99	75.174	ENSPREG00000017802	clp1	98	75.174	Poecilia_reticulata
ENSUMAG00000018317	CLP1	53	99.554	ENSPPYG00000003266	-	100	99.554	Pongo_abelii
ENSUMAG00000018317	CLP1	100	100.000	ENSPCOG00000000360	CLP1	98	100.000	Propithecus_coquereli
ENSUMAG00000018317	CLP1	100	100.000	ENSPVAG00000016270	CLP1	100	100.000	Pteropus_vampyrus
ENSUMAG00000018317	CLP1	99	75.174	ENSPNYG00000017274	clp1	97	75.174	Pundamilia_nyererei
ENSUMAG00000018317	CLP1	97	80.238	ENSPNAG00000026460	clp1	95	80.285	Pygocentrus_nattereri
ENSUMAG00000018317	CLP1	100	99.059	ENSRNOG00000007416	Clp1	100	99.059	Rattus_norvegicus
ENSUMAG00000018317	CLP1	100	99.529	ENSRBIG00000018191	CLP1	100	99.529	Rhinopithecus_bieti
ENSUMAG00000018317	CLP1	100	99.529	ENSRROG00000039265	CLP1	100	99.529	Rhinopithecus_roxellana
ENSUMAG00000018317	CLP1	100	99.529	ENSSBOG00000032517	-	100	99.529	Saimiri_boliviensis_boliviensis
ENSUMAG00000018317	CLP1	96	79.310	ENSSBOG00000010558	-	93	79.310	Saimiri_boliviensis_boliviensis
ENSUMAG00000018317	CLP1	100	98.118	ENSSHAG00000015695	CLP1	100	98.118	Sarcophilus_harrisii
ENSUMAG00000018317	CLP1	97	79.059	ENSSFOG00015000628	clp1	96	79.059	Scleropages_formosus
ENSUMAG00000018317	CLP1	99	75.174	ENSSMAG00000019423	clp1	97	75.174	Scophthalmus_maximus
ENSUMAG00000018317	CLP1	98	77.358	ENSSDUG00000014495	clp1	96	77.358	Seriola_dumerili
ENSUMAG00000018317	CLP1	98	77.123	ENSSLDG00000000937	clp1	96	77.123	Seriola_lalandi_dorsalis
ENSUMAG00000018317	CLP1	52	99.103	ENSSARG00000002459	CLP1	100	99.103	Sorex_araneus
ENSUMAG00000018317	CLP1	100	93.176	ENSSPUG00000016811	CLP1	100	93.176	Sphenodon_punctatus
ENSUMAG00000018317	CLP1	98	76.179	ENSSPAG00000016052	clp1	96	76.179	Stegastes_partitus
ENSUMAG00000018317	CLP1	100	100.000	ENSSSCG00000031442	CLP1	100	100.000	Sus_scrofa
ENSUMAG00000018317	CLP1	100	92.000	ENSTGUG00000007002	CLP1	100	92.000	Taeniopygia_guttata
ENSUMAG00000018317	CLP1	99	76.581	ENSTRUG00000012602	clp1	98	76.581	Takifugu_rubripes
ENSUMAG00000018317	CLP1	99	76.112	ENSTNIG00000013125	clp1	98	76.112	Tetraodon_nigroviridis
ENSUMAG00000018317	CLP1	100	98.824	ENSTBEG00000009975	CLP1	100	98.824	Tupaia_belangeri
ENSUMAG00000018317	CLP1	100	99.529	ENSTTRG00000002096	CLP1	100	99.529	Tursiops_truncatus
ENSUMAG00000018317	CLP1	100	100.000	ENSUAMG00000011388	CLP1	100	100.000	Ursus_americanus
ENSUMAG00000018317	CLP1	100	100.000	ENSVVUG00000017138	CLP1	97	100.000	Vulpes_vulpes
ENSUMAG00000018317	CLP1	98	77.698	ENSXETG00000007088	clp1	95	78.417	Xenopus_tropicalis
ENSUMAG00000018317	CLP1	99	75.174	ENSXCOG00000002287	clp1	98	75.174	Xiphophorus_couchianus
ENSUMAG00000018317	CLP1	99	75.174	ENSXMAG00000009783	clp1	98	75.174	Xiphophorus_maculatus