EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000018340 (Gene tree)
Gene ID: 103670546
Gene Symbol: SRFBP1
Alias: BUD22|FLJ25286|Rlb1|STRAP|p49
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 54369 bases
Position: chrKK498644.1:8257262-8311630
Accession: 26333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000025204	BUD22	PF09073.10	9.6e-12	1	1
ENSUMAP00000025190	BUD22	PF09073.10	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000029832	SRFBP1-202	1224	-	ENSUMAP00000025204	407 (aa)	-	-
ENSUMAT00000029818	SRFBP1-201	1173	-	ENSUMAP00000025190	390 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000018340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000018340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000018340	SRFBP1	100	73.872	ENSG00000151304	SRFBP1	97	77.458	Homo_sapiens
ENSUMAG00000018340	SRFBP1	79	55.769	ENSAPOG00000021469	-	69	55.769	Acanthochromis_polyacanthus
ENSUMAG00000018340	SRFBP1	96	89.209	ENSAMEG00000018050	SRFBP1	97	89.209	Ailuropoda_melanoleuca
ENSUMAG00000018340	SRFBP1	100	41.546	ENSACIG00000019127	-	98	42.410	Amphilophus_citrinellus
ENSUMAG00000018340	SRFBP1	79	58.000	ENSAOCG00000002182	-	65	69.444	Amphiprion_ocellaris
ENSUMAG00000018340	SRFBP1	79	58.000	ENSAPEG00000003041	-	66	69.444	Amphiprion_percula
ENSUMAG00000018340	SRFBP1	92	69.444	ENSATEG00000007289	-	69	69.444	Anabas_testudineus
ENSUMAG00000018340	SRFBP1	100	43.736	ENSACAG00000003779	SRFBP1	99	43.678	Anolis_carolinensis
ENSUMAG00000018340	SRFBP1	100	72.922	ENSANAG00000022485	SRFBP1	97	76.499	Aotus_nancymaae
ENSUMAG00000018340	SRFBP1	100	36.786	ENSACLG00000013909	-	87	37.632	Astatotilapia_calliptera
ENSUMAG00000018340	SRFBP1	70	49.573	ENSAMXG00000040976	srfbp1	68	49.573	Astyanax_mexicanus
ENSUMAG00000018340	SRFBP1	100	75.952	ENSBTAG00000014320	SRFBP1	100	77.218	Bos_taurus
ENSUMAG00000018340	SRFBP1	96	76.978	ENSCJAG00000017177	SRFBP1	97	76.739	Callithrix_jacchus
ENSUMAG00000018340	SRFBP1	96	86.058	ENSCAFG00000000512	SRFBP1	98	86.538	Canis_familiaris
ENSUMAG00000018340	SRFBP1	96	86.058	ENSCAFG00020009389	SRFBP1	97	86.538	Canis_lupus_dingo
ENSUMAG00000018340	SRFBP1	97	59.024	ENSTSYG00000006869	-	100	58.680	Carlito_syrichta
ENSUMAG00000018340	SRFBP1	97	74.402	ENSTSYG00000008630	-	98	74.163	Carlito_syrichta
ENSUMAG00000018340	SRFBP1	100	65.802	ENSCPOG00000004695	SRFBP1	97	69.762	Cavia_porcellus
ENSUMAG00000018340	SRFBP1	100	72.684	ENSCCAG00000032237	-	97	76.499	Cebus_capucinus
ENSUMAG00000018340	SRFBP1	99	77.189	ENSCATG00000040904	SRFBP1	100	77.189	Cercocebus_atys
ENSUMAG00000018340	SRFBP1	100	65.957	ENSCLAG00000003630	SRFBP1	97	69.690	Chinchilla_lanigera
ENSUMAG00000018340	SRFBP1	100	72.447	ENSCSAG00000014636	SRFBP1	97	77.218	Chlorocebus_sabaeus
ENSUMAG00000018340	SRFBP1	100	73.872	ENSCANG00000041298	SRFBP1	97	77.698	Colobus_angolensis_palliatus
ENSUMAG00000018340	SRFBP1	100	65.640	ENSCGRG00001000718	Srfbp1	95	69.378	Cricetulus_griseus_chok1gshd
ENSUMAG00000018340	SRFBP1	96	68.434	ENSCGRG00000010837	Srfbp1	100	68.916	Cricetulus_griseus_crigri
ENSUMAG00000018340	SRFBP1	72	80.000	ENSCSEG00000011789	-	78	60.504	Cynoglossus_semilaevis
ENSUMAG00000018340	SRFBP1	100	39.141	ENSCVAG00000013010	-	97	38.847	Cyprinodon_variegatus
ENSUMAG00000018340	SRFBP1	77	73.451	ENSDNOG00000017733	SRFBP1	100	71.976	Dasypus_novemcinctus
ENSUMAG00000018340	SRFBP1	79	65.217	ENSETEG00000012408	SRFBP1	100	67.073	Echinops_telfairi
ENSUMAG00000018340	SRFBP1	76	46.094	ENSEBUG00000007806	SRFBP1	57	46.774	Eptatretus_burgeri
ENSUMAG00000018340	SRFBP1	96	82.933	ENSEASG00005012421	SRFBP1	97	81.971	Equus_asinus_asinus
ENSUMAG00000018340	SRFBP1	96	82.692	ENSECAG00000015330	SRFBP1	97	81.731	Equus_caballus
ENSUMAG00000018340	SRFBP1	96	67.626	ENSEEUG00000011514	SRFBP1	97	68.345	Erinaceus_europaeus
ENSUMAG00000018340	SRFBP1	100	38.652	ENSELUG00000018381	-	96	36.526	Esox_lucius
ENSUMAG00000018340	SRFBP1	100	81.490	ENSFCAG00000035118	SRFBP1	97	83.373	Felis_catus
ENSUMAG00000018340	SRFBP1	98	42.056	ENSFALG00000007595	SRFBP1	100	42.130	Ficedula_albicollis
ENSUMAG00000018340	SRFBP1	100	64.692	ENSFDAG00000005102	SRFBP1	97	68.900	Fukomys_damarensis
ENSUMAG00000018340	SRFBP1	77	64.286	ENSFHEG00000000477	-	85	36.611	Fundulus_heteroclitus
ENSUMAG00000018340	SRFBP1	72	57.391	ENSGMOG00000012729	-	87	35.388	Gadus_morhua
ENSUMAG00000018340	SRFBP1	77	64.286	ENSGAFG00000018777	-	62	58.333	Gambusia_affinis
ENSUMAG00000018340	SRFBP1	100	40.189	ENSGACG00000009055	-	83	37.799	Gasterosteus_aculeatus
ENSUMAG00000018340	SRFBP1	98	44.235	ENSGAGG00000024915	SRFBP1	99	46.118	Gopherus_agassizii
ENSUMAG00000018340	SRFBP1	100	74.584	ENSGGOG00000007725	SRFBP1	97	78.177	Gorilla_gorilla
ENSUMAG00000018340	SRFBP1	78	56.115	ENSHCOG00000020644	-	53	62.609	Hippocampus_comes
ENSUMAG00000018340	SRFBP1	96	72.967	ENSSTOG00000029184	SRFBP1	95	72.967	Ictidomys_tridecemlineatus
ENSUMAG00000018340	SRFBP1	98	63.882	ENSJJAG00000013229	Srfbp1	100	64.619	Jaculus_jaculus
ENSUMAG00000018340	SRFBP1	100	37.104	ENSLBEG00000013924	-	71	61.345	Labrus_bergylta
ENSUMAG00000018340	SRFBP1	79	34.254	ENSLACG00000004456	SRFBP1	100	35.054	Latimeria_chalumnae
ENSUMAG00000018340	SRFBP1	100	38.359	ENSLOCG00000008772	SRFBP1	99	39.238	Lepisosteus_oculatus
ENSUMAG00000018340	SRFBP1	96	77.751	ENSLAFG00000015303	SRFBP1	95	76.794	Loxodonta_africana
ENSUMAG00000018340	SRFBP1	99	76.995	ENSMFAG00000031263	SRFBP1	97	78.177	Macaca_fascicularis
ENSUMAG00000018340	SRFBP1	100	74.584	ENSMMUG00000021009	SRFBP1	99	78.177	Macaca_mulatta
ENSUMAG00000018340	SRFBP1	99	76.995	ENSMNEG00000040870	SRFBP1	97	78.177	Macaca_nemestrina
ENSUMAG00000018340	SRFBP1	86	80.000	ENSMAMG00000004632	-	68	69.444	Mastacembelus_armatus
ENSUMAG00000018340	SRFBP1	91	72.727	ENSMZEG00005000432	-	72	72.727	Maylandia_zebra
ENSUMAG00000018340	SRFBP1	99	65.228	ENSMAUG00000009431	Srfbp1	95	68.106	Mesocricetus_auratus
ENSUMAG00000018340	SRFBP1	100	73.872	ENSMICG00000042923	SRFBP1	97	77.938	Microcebus_murinus
ENSUMAG00000018340	SRFBP1	100	63.146	ENSMOCG00000006206	Srfbp1	95	66.268	Microtus_ochrogaster
ENSUMAG00000018340	SRFBP1	76	69.444	ENSMMOG00000021202	-	96	35.435	Mola_mola
ENSUMAG00000018340	SRFBP1	100	53.256	ENSMODG00000013487	-	97	56.338	Monodelphis_domestica
ENSUMAG00000018340	SRFBP1	87	68.750	ENSMALG00000001812	-	71	70.588	Monopterus_albus
ENSUMAG00000018340	SRFBP1	100	65.394	MGP_CAROLIEiJ_G0022271	Srfbp1	95	68.675	Mus_caroli
ENSUMAG00000018340	SRFBP1	100	64.066	ENSMUSG00000024528	Srfbp1	95	67.064	Mus_musculus
ENSUMAG00000018340	SRFBP1	100	61.792	MGP_PahariEiJ_G0019004	Srfbp1	95	65.952	Mus_pahari
ENSUMAG00000018340	SRFBP1	100	64.539	MGP_SPRETEiJ_G0023184	Srfbp1	95	67.303	Mus_spretus
ENSUMAG00000018340	SRFBP1	96	87.105	ENSMPUG00000013031	SRFBP1	100	87.105	Mustela_putorius_furo
ENSUMAG00000018340	SRFBP1	99	78.422	ENSMLUG00000009984	SRFBP1	99	78.190	Myotis_lucifugus
ENSUMAG00000018340	SRFBP1	99	65.707	ENSNGAG00000013229	Srfbp1	97	68.345	Nannospalax_galili
ENSUMAG00000018340	SRFBP1	100	39.858	ENSNBRG00000001146	-	98	39.858	Neolamprologus_brichardi
ENSUMAG00000018340	SRFBP1	100	75.952	ENSNLEG00000011949	SRFBP1	97	78.606	Nomascus_leucogenys
ENSUMAG00000018340	SRFBP1	56	67.797	ENSMEUG00000009383	-	52	67.797	Notamacropus_eugenii
ENSUMAG00000018340	SRFBP1	71	74.545	ENSOPRG00000003881	-	77	74.545	Ochotona_princeps
ENSUMAG00000018340	SRFBP1	96	67.797	ENSODEG00000007258	SRFBP1	100	68.765	Octodon_degus
ENSUMAG00000018340	SRFBP1	84	48.128	ENSOANG00000010042	-	99	48.128	Ornithorhynchus_anatinus
ENSUMAG00000018340	SRFBP1	100	68.258	ENSOCUG00000009556	SRFBP1	97	73.012	Oryctolagus_cuniculus
ENSUMAG00000018340	SRFBP1	72	57.391	ENSORLG00000014234	-	58	58.559	Oryzias_latipes
ENSUMAG00000018340	SRFBP1	71	58.261	ENSORLG00020020129	-	55	59.459	Oryzias_latipes_hni
ENSUMAG00000018340	SRFBP1	99	38.425	ENSORLG00015000238	-	97	38.005	Oryzias_latipes_hsok
ENSUMAG00000018340	SRFBP1	99	71.963	ENSOGAG00000032423	SRFBP1	99	71.262	Otolemur_garnettii
ENSUMAG00000018340	SRFBP1	100	73.397	ENSPPAG00000035848	SRFBP1	97	76.978	Pan_paniscus
ENSUMAG00000018340	SRFBP1	100	80.191	ENSPPRG00000001695	SRFBP1	97	84.819	Panthera_pardus
ENSUMAG00000018340	SRFBP1	100	80.288	ENSPTIG00000012305	SRFBP1	97	84.096	Panthera_tigris_altaica
ENSUMAG00000018340	SRFBP1	100	73.397	ENSPTRG00000017172	SRFBP1	97	76.978	Pan_troglodytes
ENSUMAG00000018340	SRFBP1	99	77.882	ENSPANG00000003799	SRFBP1	97	78.125	Papio_anubis
ENSUMAG00000018340	SRFBP1	90	76.667	ENSPKIG00000024291	-	70	53.600	Paramormyrops_kingsleyae
ENSUMAG00000018340	SRFBP1	100	44.111	ENSPSIG00000010650	SRFBP1	97	45.221	Pelodiscus_sinensis
ENSUMAG00000018340	SRFBP1	100	41.205	ENSPMGG00000001675	-	98	41.289	Periophthalmus_magnuspinnatus
ENSUMAG00000018340	SRFBP1	100	55.924	ENSPCIG00000028532	SRFBP1	92	59.091	Phascolarctos_cinereus
ENSUMAG00000018340	SRFBP1	100	38.549	ENSPFOG00000005272	-	86	39.729	Poecilia_formosa
ENSUMAG00000018340	SRFBP1	77	65.854	ENSPLAG00000018282	-	86	34.227	Poecilia_latipinna
ENSUMAG00000018340	SRFBP1	77	65.854	ENSPMEG00000020184	-	86	33.613	Poecilia_mexicana
ENSUMAG00000018340	SRFBP1	99	39.762	ENSPREG00000017248	-	97	40.047	Poecilia_reticulata
ENSUMAG00000018340	SRFBP1	100	73.397	ENSPPYG00000015714	SRFBP1	97	76.739	Pongo_abelii
ENSUMAG00000018340	SRFBP1	96	76.978	ENSPCOG00000027331	SRFBP1	97	78.177	Propithecus_coquereli
ENSUMAG00000018340	SRFBP1	59	90.411	ENSPVAG00000017512	-	55	92.254	Pteropus_vampyrus
ENSUMAG00000018340	SRFBP1	71	72.727	ENSPNYG00000010355	-	98	40.000	Pundamilia_nyererei
ENSUMAG00000018340	SRFBP1	73	52.000	ENSPNAG00000029666	srfbp1	66	54.622	Pygocentrus_nattereri
ENSUMAG00000018340	SRFBP1	100	62.736	ENSRNOG00000014808	Srfbp1	95	65.714	Rattus_norvegicus
ENSUMAG00000018340	SRFBP1	96	73.684	ENSRBIG00000031064	SRFBP1	99	73.684	Rhinopithecus_bieti
ENSUMAG00000018340	SRFBP1	100	73.634	ENSRROG00000026932	SRFBP1	97	77.218	Rhinopithecus_roxellana
ENSUMAG00000018340	SRFBP1	100	73.397	ENSSBOG00000015464	-	97	76.499	Saimiri_boliviensis_boliviensis
ENSUMAG00000018340	SRFBP1	100	55.107	ENSSHAG00000016003	SRFBP1	97	58.753	Sarcophilus_harrisii
ENSUMAG00000018340	SRFBP1	100	37.124	ENSSFOG00015001274	srfbp1	98	34.267	Scleropages_formosus
ENSUMAG00000018340	SRFBP1	100	37.295	ENSSMAG00000020630	-	84	37.295	Scophthalmus_maximus
ENSUMAG00000018340	SRFBP1	92	67.568	ENSSDUG00000001828	-	69	67.568	Seriola_dumerili
ENSUMAG00000018340	SRFBP1	96	72.662	ENSSARG00000010669	SRFBP1	97	74.101	Sorex_araneus
ENSUMAG00000018340	SRFBP1	99	43.357	ENSSPUG00000009204	SRFBP1	100	43.619	Sphenodon_punctatus
ENSUMAG00000018340	SRFBP1	76	69.444	ENSSPAG00000010728	-	67	69.444	Stegastes_partitus
ENSUMAG00000018340	SRFBP1	96	79.808	ENSSSCG00000022656	SRFBP1	97	79.567	Sus_scrofa
ENSUMAG00000018340	SRFBP1	100	42.067	ENSTNIG00000009267	-	96	42.067	Tetraodon_nigroviridis
ENSUMAG00000018340	SRFBP1	85	90.367	ENSTTRG00000007726	SRFBP1	82	90.783	Tursiops_truncatus
ENSUMAG00000018340	SRFBP1	96	93.447	ENSUAMG00000016707	SRFBP1	100	93.447	Ursus_americanus
ENSUMAG00000018340	SRFBP1	100	76.372	ENSVPAG00000005714	SRFBP1	97	79.759	Vicugna_pacos
ENSUMAG00000018340	SRFBP1	96	86.779	ENSVVUG00000019178	SRFBP1	100	84.988	Vulpes_vulpes
ENSUMAG00000018340	SRFBP1	99	45.647	ENSXETG00000004681	srfbp1	97	46.009	Xenopus_tropicalis
ENSUMAG00000018340	SRFBP1	75	67.647	ENSXCOG00000003410	-	98	33.473	Xiphophorus_couchianus
ENSUMAG00000018340	SRFBP1	75	67.647	ENSXMAG00000026251	-	85	34.511	Xiphophorus_maculatus