EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000018461 (Gene tree)
Gene ID: 103664934
Gene Symbol: RIOK1
Alias: -
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 23392 bases
Position: chrKK498605.1:10018175-10041566
Accession: 103664934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000025345	RIO1	PF01163.22	6.8e-77	1	1
ENSUMAP00000025338	RIO1	PF01163.22	7.4e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000029994	RIOK1-202	1935	-	ENSUMAP00000025345	569 (aa)	XP_008691057	UPI0004E018D5
ENSUMAT00000029983	RIOK1-201	2001	XM_008692834	ENSUMAP00000025338	591 (aa)	XP_008691056	UPI0004E00B15

Gene Model

Click here to download ENSUMAG00000018461's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000018461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000018461	RIOK1	62	39.050	ENSUMAG00000020218	RIOK3	61	41.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000018461	RIOK1	100	89.104	ENSG00000124784	RIOK1	100	89.807	Homo_sapiens
ENSUMAG00000018461	RIOK1	57	67.901	ENSAPOG00000015632	riok1	99	67.901	Acanthochromis_polyacanthus
ENSUMAG00000018461	RIOK1	100	99.297	ENSAMEG00000017367	RIOK1	100	99.297	Ailuropoda_melanoleuca
ENSUMAG00000018461	RIOK1	88	71.543	ENSACIG00000003735	riok1	87	72.449	Amphilophus_citrinellus
ENSUMAG00000018461	RIOK1	99	67.082	ENSAOCG00000011818	riok1	100	66.608	Amphiprion_ocellaris
ENSUMAG00000018461	RIOK1	99	67.019	ENSAPEG00000001345	riok1	100	66.491	Amphiprion_percula
ENSUMAG00000018461	RIOK1	81	72.138	ENSATEG00000006594	riok1	99	72.138	Anabas_testudineus
ENSUMAG00000018461	RIOK1	84	81.420	ENSAPLG00000004196	RIOK1	100	83.193	Anas_platyrhynchos
ENSUMAG00000018461	RIOK1	100	76.708	ENSACAG00000000695	RIOK1	100	76.532	Anolis_carolinensis
ENSUMAG00000018461	RIOK1	100	79.262	ENSANAG00000023777	RIOK1	100	79.262	Aotus_nancymaae
ENSUMAG00000018461	RIOK1	99	66.845	ENSACLG00000015799	riok1	99	66.845	Astatotilapia_calliptera
ENSUMAG00000018461	RIOK1	99	69.244	ENSAMXG00000015286	riok1	99	69.191	Astyanax_mexicanus
ENSUMAG00000018461	RIOK1	100	89.455	ENSBTAG00000013821	RIOK1	100	88.928	Bos_taurus
ENSUMAG00000018461	RIOK1	78	47.903	WBGene00019698	riok-1	77	50.962	Caenorhabditis_elegans
ENSUMAG00000018461	RIOK1	100	88.401	ENSCJAG00000042960	RIOK1	100	88.401	Callithrix_jacchus
ENSUMAG00000018461	RIOK1	100	93.849	ENSCAFG00000009563	RIOK1	100	93.849	Canis_familiaris
ENSUMAG00000018461	RIOK1	96	91.606	ENSCAFG00020013233	RIOK1	98	91.606	Canis_lupus_dingo
ENSUMAG00000018461	RIOK1	100	87.873	ENSCHIG00000001534	RIOK1	100	88.752	Capra_hircus
ENSUMAG00000018461	RIOK1	66	89.920	ENSTSYG00000011368	RIOK1	100	92.966	Carlito_syrichta
ENSUMAG00000018461	RIOK1	79	88.000	ENSCAPG00000008489	RIOK1	100	88.147	Cavia_aperea
ENSUMAG00000018461	RIOK1	98	83.273	ENSCPOG00000009882	RIOK1	100	84.561	Cavia_porcellus
ENSUMAG00000018461	RIOK1	100	89.104	ENSCCAG00000024061	RIOK1	100	89.982	Cebus_capucinus
ENSUMAG00000018461	RIOK1	100	88.225	ENSCATG00000001548	RIOK1	100	88.928	Cercocebus_atys
ENSUMAG00000018461	RIOK1	100	88.576	ENSCLAG00000003522	RIOK1	100	88.576	Chinchilla_lanigera
ENSUMAG00000018461	RIOK1	94	87.430	ENSCSAG00000007396	RIOK1	98	87.992	Chlorocebus_sabaeus
ENSUMAG00000018461	RIOK1	85	80.251	ENSCHOG00000001873	RIOK1	85	78.683	Choloepus_hoffmanni
ENSUMAG00000018461	RIOK1	86	79.303	ENSCPBG00000008685	RIOK1	91	75.235	Chrysemys_picta_bellii
ENSUMAG00000018461	RIOK1	100	88.401	ENSCANG00000032919	RIOK1	100	89.279	Colobus_angolensis_palliatus
ENSUMAG00000018461	RIOK1	100	80.668	ENSCGRG00001018868	Riok1	100	79.613	Cricetulus_griseus_chok1gshd
ENSUMAG00000018461	RIOK1	100	80.668	ENSCGRG00000008015	Riok1	100	79.613	Cricetulus_griseus_crigri
ENSUMAG00000018461	RIOK1	88	51.793	ENSCSEG00000015014	riok1	86	52.121	Cynoglossus_semilaevis
ENSUMAG00000018461	RIOK1	57	66.258	ENSCVAG00000011291	riok1	99	66.258	Cyprinodon_variegatus
ENSUMAG00000018461	RIOK1	99	69.381	ENSDARG00000016399	riok1	100	69.735	Danio_rerio
ENSUMAG00000018461	RIOK1	100	86.562	ENSDNOG00000015813	RIOK1	100	86.562	Dasypus_novemcinctus
ENSUMAG00000018461	RIOK1	100	87.368	ENSDORG00000008530	Riok1	100	87.719	Dipodomys_ordii
ENSUMAG00000018461	RIOK1	77	52.679	FBgn0036187	RIOK1	78	53.419	Drosophila_melanogaster
ENSUMAG00000018461	RIOK1	100	83.480	ENSETEG00000020273	RIOK1	100	84.359	Echinops_telfairi
ENSUMAG00000018461	RIOK1	99	60.954	ENSEBUG00000013672	riok1	99	62.191	Eptatretus_burgeri
ENSUMAG00000018461	RIOK1	94	90.807	ENSEASG00005012032	RIOK1	94	90.619	Equus_asinus_asinus
ENSUMAG00000018461	RIOK1	100	91.037	ENSECAG00000009007	RIOK1	100	90.861	Equus_caballus
ENSUMAG00000018461	RIOK1	77	75.909	ENSEEUG00000007123	RIOK1	100	75.909	Erinaceus_europaeus
ENSUMAG00000018461	RIOK1	99	66.963	ENSELUG00000017029	riok1	99	67.851	Esox_lucius
ENSUMAG00000018461	RIOK1	100	92.483	ENSFCAG00000027290	RIOK1	100	91.434	Felis_catus
ENSUMAG00000018461	RIOK1	100	77.083	ENSFALG00000013244	RIOK1	100	78.421	Ficedula_albicollis
ENSUMAG00000018461	RIOK1	100	87.698	ENSFDAG00000019139	RIOK1	100	87.698	Fukomys_damarensis
ENSUMAG00000018461	RIOK1	67	76.640	ENSFHEG00000021419	riok1	98	69.824	Fundulus_heteroclitus
ENSUMAG00000018461	RIOK1	72	70.702	ENSGMOG00000018668	riok1	92	72.774	Gadus_morhua
ENSUMAG00000018461	RIOK1	57	76.061	ENSGALG00000012795	RIOK1	100	79.537	Gallus_gallus
ENSUMAG00000018461	RIOK1	93	57.925	ENSGAFG00000004091	riok1	79	62.630	Gambusia_affinis
ENSUMAG00000018461	RIOK1	97	64.312	ENSGACG00000002496	riok1	94	72.561	Gasterosteus_aculeatus
ENSUMAG00000018461	RIOK1	82	77.849	ENSGAGG00000002262	RIOK1	98	77.634	Gopherus_agassizii
ENSUMAG00000018461	RIOK1	100	73.462	ENSGGOG00000011037	RIOK1	100	74.517	Gorilla_gorilla
ENSUMAG00000018461	RIOK1	100	85.062	ENSHGLG00000008699	RIOK1	100	85.062	Heterocephalus_glaber_female
ENSUMAG00000018461	RIOK1	100	84.886	ENSHGLG00100008188	RIOK1	100	84.886	Heterocephalus_glaber_male
ENSUMAG00000018461	RIOK1	88	69.600	ENSHCOG00000013275	riok1	90	70.423	Hippocampus_comes
ENSUMAG00000018461	RIOK1	99	69.298	ENSIPUG00000003290	riok1	100	69.634	Ictalurus_punctatus
ENSUMAG00000018461	RIOK1	100	88.947	ENSSTOG00000009289	RIOK1	100	88.947	Ictidomys_tridecemlineatus
ENSUMAG00000018461	RIOK1	100	85.589	ENSJJAG00000015152	Riok1	100	85.062	Jaculus_jaculus
ENSUMAG00000018461	RIOK1	68	75.578	ENSKMAG00000019378	riok1	99	75.578	Kryptolebias_marmoratus
ENSUMAG00000018461	RIOK1	88	71.743	ENSLBEG00000016650	riok1	86	72.358	Labrus_bergylta
ENSUMAG00000018461	RIOK1	100	66.957	ENSLACG00000000300	RIOK1	100	66.957	Latimeria_chalumnae
ENSUMAG00000018461	RIOK1	99	71.429	ENSLOCG00000011728	riok1	99	71.781	Lepisosteus_oculatus
ENSUMAG00000018461	RIOK1	100	86.713	ENSLAFG00000005504	RIOK1	100	85.968	Loxodonta_africana
ENSUMAG00000018461	RIOK1	100	88.576	ENSMFAG00000029990	RIOK1	100	89.104	Macaca_fascicularis
ENSUMAG00000018461	RIOK1	100	88.401	ENSMMUG00000015577	RIOK1	100	88.928	Macaca_mulatta
ENSUMAG00000018461	RIOK1	100	85.062	ENSMNEG00000034396	RIOK1	99	89.247	Macaca_nemestrina
ENSUMAG00000018461	RIOK1	100	88.049	ENSMLEG00000026327	RIOK1	100	88.752	Mandrillus_leucophaeus
ENSUMAG00000018461	RIOK1	98	67.025	ENSMAMG00000019557	riok1	99	67.742	Mastacembelus_armatus
ENSUMAG00000018461	RIOK1	99	66.607	ENSMZEG00005019482	riok1	99	66.607	Maylandia_zebra
ENSUMAG00000018461	RIOK1	100	74.132	ENSMGAG00000003816	RIOK1	100	76.140	Meleagris_gallopavo
ENSUMAG00000018461	RIOK1	100	82.074	ENSMAUG00000012751	Riok1	100	81.019	Mesocricetus_auratus
ENSUMAG00000018461	RIOK1	100	89.807	ENSMICG00000044301	RIOK1	84	89.631	Microcebus_murinus
ENSUMAG00000018461	RIOK1	100	79.438	ENSMOCG00000017032	Riok1	100	78.910	Microtus_ochrogaster
ENSUMAG00000018461	RIOK1	84	62.745	ENSMMOG00000020598	riok1	87	63.137	Mola_mola
ENSUMAG00000018461	RIOK1	100	75.986	ENSMODG00000009964	RIOK1	100	77.586	Monodelphis_domestica
ENSUMAG00000018461	RIOK1	88	63.727	ENSMALG00000019982	riok1	89	66.038	Monopterus_albus
ENSUMAG00000018461	RIOK1	99	80.783	MGP_CAROLIEiJ_G0018439	Riok1	99	81.495	Mus_caroli
ENSUMAG00000018461	RIOK1	99	79.929	ENSMUSG00000021428	Riok1	99	80.817	Mus_musculus
ENSUMAG00000018461	RIOK1	99	80.783	MGP_PahariEiJ_G0019507	Riok1	99	79.715	Mus_pahari
ENSUMAG00000018461	RIOK1	99	80.249	MGP_SPRETEiJ_G0019319	Riok1	99	81.139	Mus_spretus
ENSUMAG00000018461	RIOK1	100	94.221	ENSMPUG00000000570	RIOK1	100	94.396	Mustela_putorius_furo
ENSUMAG00000018461	RIOK1	100	90.510	ENSMLUG00000015312	RIOK1	100	90.510	Myotis_lucifugus
ENSUMAG00000018461	RIOK1	100	86.292	ENSNGAG00000021734	Riok1	100	87.346	Nannospalax_galili
ENSUMAG00000018461	RIOK1	74	75.650	ENSNBRG00000017489	riok1	86	71.584	Neolamprologus_brichardi
ENSUMAG00000018461	RIOK1	100	78.383	ENSNLEG00000011621	RIOK1	100	79.438	Nomascus_leucogenys
ENSUMAG00000018461	RIOK1	84	52.941	ENSMEUG00000006679	-	84	54.832	Notamacropus_eugenii
ENSUMAG00000018461	RIOK1	65	85.175	ENSOPRG00000009524	RIOK1	100	85.175	Ochotona_princeps
ENSUMAG00000018461	RIOK1	71	75.871	ENSODEG00000005663	RIOK1	100	75.871	Octodon_degus
ENSUMAG00000018461	RIOK1	98	68.149	ENSONIG00000014010	riok1	98	68.861	Oreochromis_niloticus
ENSUMAG00000018461	RIOK1	82	86.422	ENSOANG00000012553	RIOK1	100	86.422	Ornithorhynchus_anatinus
ENSUMAG00000018461	RIOK1	100	84.710	ENSOCUG00000011824	RIOK1	100	84.710	Oryctolagus_cuniculus
ENSUMAG00000018461	RIOK1	98	67.204	ENSORLG00000008221	riok1	86	74.530	Oryzias_latipes
ENSUMAG00000018461	RIOK1	98	66.187	ENSORLG00020013838	riok1	60	73.166	Oryzias_latipes_hni
ENSUMAG00000018461	RIOK1	98	67.563	ENSORLG00015009817	riok1	85	74.948	Oryzias_latipes_hsok
ENSUMAG00000018461	RIOK1	98	66.071	ENSOMEG00000002758	riok1	78	74.113	Oryzias_melastigma
ENSUMAG00000018461	RIOK1	100	78.709	ENSOGAG00000010192	RIOK1	100	79.268	Otolemur_garnettii
ENSUMAG00000018461	RIOK1	100	88.401	ENSOARG00000017747	RIOK1	100	88.576	Ovis_aries
ENSUMAG00000018461	RIOK1	100	78.772	ENSPPAG00000016349	RIOK1	100	88.379	Pan_paniscus
ENSUMAG00000018461	RIOK1	100	92.483	ENSPPRG00000001932	RIOK1	100	91.958	Panthera_pardus
ENSUMAG00000018461	RIOK1	100	92.832	ENSPTIG00000018545	RIOK1	100	92.308	Panthera_tigris_altaica
ENSUMAG00000018461	RIOK1	100	88.928	ENSPTRG00000017700	RIOK1	100	89.631	Pan_troglodytes
ENSUMAG00000018461	RIOK1	100	88.225	ENSPANG00000016522	RIOK1	100	88.752	Papio_anubis
ENSUMAG00000018461	RIOK1	99	69.149	ENSPKIG00000006442	riok1	100	69.858	Paramormyrops_kingsleyae
ENSUMAG00000018461	RIOK1	100	77.680	ENSPSIG00000006488	RIOK1	99	78.596	Pelodiscus_sinensis
ENSUMAG00000018461	RIOK1	69	72.774	ENSPMGG00000017807	riok1	96	68.333	Periophthalmus_magnuspinnatus
ENSUMAG00000018461	RIOK1	100	81.722	ENSPEMG00000017844	Riok1	100	81.019	Peromyscus_maniculatus_bairdii
ENSUMAG00000018461	RIOK1	57	78.462	ENSPMAG00000006351	riok1	98	67.548	Petromyzon_marinus
ENSUMAG00000018461	RIOK1	94	77.222	ENSPCIG00000012653	RIOK1	94	76.923	Phascolarctos_cinereus
ENSUMAG00000018461	RIOK1	98	62.724	ENSPFOG00000011532	riok1	99	63.978	Poecilia_formosa
ENSUMAG00000018461	RIOK1	98	63.082	ENSPLAG00000001341	riok1	99	64.337	Poecilia_latipinna
ENSUMAG00000018461	RIOK1	98	62.724	ENSPMEG00000007710	riok1	99	64.158	Poecilia_mexicana
ENSUMAG00000018461	RIOK1	98	64.937	ENSPREG00000009237	riok1	99	63.978	Poecilia_reticulata
ENSUMAG00000018461	RIOK1	100	89.631	ENSPPYG00000016207	RIOK1	100	89.631	Pongo_abelii
ENSUMAG00000018461	RIOK1	100	74.165	ENSPCAG00000007892	RIOK1	100	73.462	Procavia_capensis
ENSUMAG00000018461	RIOK1	100	91.068	ENSPVAG00000014091	RIOK1	100	91.769	Pteropus_vampyrus
ENSUMAG00000018461	RIOK1	57	71.560	ENSPNYG00000004465	riok1	100	71.560	Pundamilia_nyererei
ENSUMAG00000018461	RIOK1	99	67.882	ENSPNAG00000015435	riok1	99	68.430	Pygocentrus_nattereri
ENSUMAG00000018461	RIOK1	99	80.961	ENSRNOG00000014049	Riok1	100	86.853	Rattus_norvegicus
ENSUMAG00000018461	RIOK1	100	88.752	ENSRBIG00000036685	RIOK1	100	88.928	Rhinopithecus_bieti
ENSUMAG00000018461	RIOK1	100	88.928	ENSRROG00000036611	RIOK1	100	89.104	Rhinopithecus_roxellana
ENSUMAG00000018461	RIOK1	59	41.848	YOR119C	RIO1	96	38.353	Saccharomyces_cerevisiae
ENSUMAG00000018461	RIOK1	100	90.158	ENSSBOG00000012588	RIOK1	100	90.158	Saimiri_boliviensis_boliviensis
ENSUMAG00000018461	RIOK1	85	80.533	ENSSHAG00000003091	RIOK1	93	80.533	Sarcophilus_harrisii
ENSUMAG00000018461	RIOK1	98	66.323	ENSSFOG00015001035	riok1	99	68.972	Scleropages_formosus
ENSUMAG00000018461	RIOK1	57	65.749	ENSSDUG00000007291	riok1	100	66.055	Seriola_dumerili
ENSUMAG00000018461	RIOK1	98	67.742	ENSSLDG00000017657	riok1	99	68.100	Seriola_lalandi_dorsalis
ENSUMAG00000018461	RIOK1	83	70.913	ENSSPUG00000007624	RIOK1	82	71.398	Sphenodon_punctatus
ENSUMAG00000018461	RIOK1	99	68.683	ENSSPAG00000022710	riok1	100	68.149	Stegastes_partitus
ENSUMAG00000018461	RIOK1	100	87.873	ENSSSCG00000001024	RIOK1	100	87.522	Sus_scrofa
ENSUMAG00000018461	RIOK1	100	77.680	ENSTGUG00000002331	RIOK1	100	77.680	Taeniopygia_guttata
ENSUMAG00000018461	RIOK1	74	62.233	ENSTRUG00000002854	riok1	94	65.206	Takifugu_rubripes
ENSUMAG00000018461	RIOK1	52	64.430	ENSTRUG00000001575	-	100	64.430	Takifugu_rubripes
ENSUMAG00000018461	RIOK1	99	60.877	ENSTNIG00000003078	riok1	99	61.014	Tetraodon_nigroviridis
ENSUMAG00000018461	RIOK1	100	83.480	ENSTBEG00000016730	RIOK1	100	83.480	Tupaia_belangeri
ENSUMAG00000018461	RIOK1	73	93.059	ENSTTRG00000017335	RIOK1	86	95.833	Tursiops_truncatus
ENSUMAG00000018461	RIOK1	94	99.625	ENSUAMG00000003721	RIOK1	96	99.625	Ursus_americanus
ENSUMAG00000018461	RIOK1	70	86.301	ENSVPAG00000010813	-	73	84.589	Vicugna_pacos
ENSUMAG00000018461	RIOK1	100	93.322	ENSVVUG00000005018	RIOK1	100	93.322	Vulpes_vulpes
ENSUMAG00000018461	RIOK1	88	73.547	ENSXETG00000020436	riok1	86	74.590	Xenopus_tropicalis
ENSUMAG00000018461	RIOK1	84	65.756	ENSXCOG00000000245	riok1	100	67.647	Xiphophorus_couchianus
ENSUMAG00000018461	RIOK1	71	73.945	ENSXMAG00000014572	riok1	83	70.938	Xiphophorus_maculatus