EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000018639 (Gene tree)
Gene ID: 103664950
Gene Symbol: RPP40
Alias: -
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 10197 bases
Position: chrKK498605.1:12289060-12299256
Accession: 103664950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000025553	Ribonuc_P_40	PF08584.11	2.9e-93	1	1
ENSUMAP00000025554	Ribonuc_P_40	PF08584.11	7.8e-70	1	2
ENSUMAP00000025554	Ribonuc_P_40	PF08584.11	7.8e-70	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000030269	RPP40-202	2138	-	ENSUMAP00000025554	355 (aa)	-	-
ENSUMAT00000030267	RPP40-201	2234	-	ENSUMAP00000025553	387 (aa)	XP_008691068	UPI0004DFFFCF

Gene Model

Click here to download ENSUMAG00000018639's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03008	Ribosome biogenesis in eukaryotes	KEGG
umr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000018639's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000018639	RPP40	94	86.777	ENSG00000124787	RPP40	100	86.777	Homo_sapiens
ENSUMAG00000018639	RPP40	82	33.333	ENSAPOG00000008660	rpp40	92	33.333	Acanthochromis_polyacanthus
ENSUMAG00000018639	RPP40	94	98.347	ENSAMEG00000012938	RPP40	100	98.347	Ailuropoda_melanoleuca
ENSUMAG00000018639	RPP40	92	37.293	ENSACIG00000003617	rpp40	98	37.293	Amphilophus_citrinellus
ENSUMAG00000018639	RPP40	92	37.815	ENSAOCG00000011846	rpp40	99	37.815	Amphiprion_ocellaris
ENSUMAG00000018639	RPP40	92	37.815	ENSAPEG00000001322	rpp40	99	37.815	Amphiprion_percula
ENSUMAG00000018639	RPP40	92	39.276	ENSATEG00000006584	rpp40	99	39.335	Anabas_testudineus
ENSUMAG00000018639	RPP40	78	67.667	ENSAPLG00000005691	RPP40	99	67.667	Anas_platyrhynchos
ENSUMAG00000018639	RPP40	94	64.754	ENSACAG00000006550	RPP40	90	64.754	Anolis_carolinensis
ENSUMAG00000018639	RPP40	94	85.399	ENSANAG00000029246	RPP40	100	85.399	Aotus_nancymaae
ENSUMAG00000018639	RPP40	92	38.592	ENSACLG00000015883	rpp40	96	38.592	Astatotilapia_calliptera
ENSUMAG00000018639	RPP40	92	47.899	ENSAMXG00000001755	rpp40	99	47.899	Astyanax_mexicanus
ENSUMAG00000018639	RPP40	94	88.154	ENSBTAG00000003332	RPP40	100	88.154	Bos_taurus
ENSUMAG00000018639	RPP40	94	85.950	ENSCJAG00000021373	RPP40	100	85.950	Callithrix_jacchus
ENSUMAG00000018639	RPP40	94	94.215	ENSCAFG00000009435	RPP40	100	94.215	Canis_familiaris
ENSUMAG00000018639	RPP40	94	94.215	ENSCAFG00020013380	RPP40	100	94.215	Canis_lupus_dingo
ENSUMAG00000018639	RPP40	94	87.052	ENSCHIG00000016849	RPP40	100	87.052	Capra_hircus
ENSUMAG00000018639	RPP40	94	88.705	ENSTSYG00000032857	RPP40	100	88.705	Carlito_syrichta
ENSUMAG00000018639	RPP40	83	80.906	ENSCAPG00000004957	RPP40	98	80.906	Cavia_aperea
ENSUMAG00000018639	RPP40	94	86.777	ENSCPOG00000005855	RPP40	100	86.777	Cavia_porcellus
ENSUMAG00000018639	RPP40	94	85.950	ENSCCAG00000019809	RPP40	100	85.950	Cebus_capucinus
ENSUMAG00000018639	RPP40	94	86.226	ENSCATG00000038787	RPP40	100	86.226	Cercocebus_atys
ENSUMAG00000018639	RPP40	94	86.501	ENSCLAG00000003235	RPP40	100	86.501	Chinchilla_lanigera
ENSUMAG00000018639	RPP40	94	86.501	ENSCSAG00000007307	RPP40	100	86.501	Chlorocebus_sabaeus
ENSUMAG00000018639	RPP40	65	70.400	ENSCHOG00000005856	-	100	70.400	Choloepus_hoffmanni
ENSUMAG00000018639	RPP40	93	70.556	ENSCPBG00000009003	RPP40	99	70.556	Chrysemys_picta_bellii
ENSUMAG00000018639	RPP40	94	86.777	ENSCANG00000033965	RPP40	100	86.777	Colobus_angolensis_palliatus
ENSUMAG00000018639	RPP40	94	80.992	ENSCGRG00001018328	Rpp40	100	80.992	Cricetulus_griseus_chok1gshd
ENSUMAG00000018639	RPP40	94	80.992	ENSCGRG00000011344	Rpp40	100	80.992	Cricetulus_griseus_crigri
ENSUMAG00000018639	RPP40	92	35.112	ENSCSEG00000015006	-	98	35.112	Cynoglossus_semilaevis
ENSUMAG00000018639	RPP40	70	34.559	ENSCVAG00000012169	rpp40	100	34.559	Cyprinodon_variegatus
ENSUMAG00000018639	RPP40	92	49.441	ENSDARG00000017605	rpp40	99	49.441	Danio_rerio
ENSUMAG00000018639	RPP40	77	84.512	ENSDNOG00000048136	RPP40	99	84.512	Dasypus_novemcinctus
ENSUMAG00000018639	RPP40	94	64.171	ENSDORG00000011196	-	100	64.171	Dipodomys_ordii
ENSUMAG00000018639	RPP40	94	84.848	ENSDORG00000029944	-	100	84.848	Dipodomys_ordii
ENSUMAG00000018639	RPP40	86	83.146	ENSETEG00000007458	RPP40	100	69.421	Echinops_telfairi
ENSUMAG00000018639	RPP40	92	44.507	ENSEBUG00000000386	rpp40	99	44.507	Eptatretus_burgeri
ENSUMAG00000018639	RPP40	100	88.462	ENSEASG00005012116	RPP40	86	88.462	Equus_asinus_asinus
ENSUMAG00000018639	RPP40	100	88.718	ENSECAG00000017247	RPP40	86	88.718	Equus_caballus
ENSUMAG00000018639	RPP40	77	70.034	ENSEEUG00000012087	RPP40	100	70.034	Erinaceus_europaeus
ENSUMAG00000018639	RPP40	92	47.486	ENSELUG00000017004	rpp40	99	47.486	Esox_lucius
ENSUMAG00000018639	RPP40	94	92.837	ENSFCAG00000009249	RPP40	100	92.837	Felis_catus
ENSUMAG00000018639	RPP40	81	65.749	ENSFALG00000013166	RPP40	100	65.749	Ficedula_albicollis
ENSUMAG00000018639	RPP40	76	69.153	ENSFDAG00000000265	-	100	69.153	Fukomys_damarensis
ENSUMAG00000018639	RPP40	94	87.328	ENSFDAG00000013001	-	100	87.328	Fukomys_damarensis
ENSUMAG00000018639	RPP40	92	38.936	ENSFHEG00000021429	rpp40	88	38.936	Fundulus_heteroclitus
ENSUMAG00000018639	RPP40	83	38.820	ENSGMOG00000018653	rpp40	100	38.820	Gadus_morhua
ENSUMAG00000018639	RPP40	93	64.444	ENSGALG00000036074	RPP40	99	64.444	Gallus_gallus
ENSUMAG00000018639	RPP40	77	33.893	ENSGAFG00000004189	-	98	33.893	Gambusia_affinis
ENSUMAG00000018639	RPP40	92	38.936	ENSGACG00000002472	rpp40	99	38.936	Gasterosteus_aculeatus
ENSUMAG00000018639	RPP40	93	70.833	ENSGAGG00000012918	RPP40	99	70.833	Gopherus_agassizii
ENSUMAG00000018639	RPP40	94	87.052	ENSGGOG00000013764	RPP40	100	87.052	Gorilla_gorilla
ENSUMAG00000018639	RPP40	85	37.838	ENSHBUG00000009378	rpp40	94	37.838	Haplochromis_burtoni
ENSUMAG00000018639	RPP40	94	87.328	ENSHGLG00000004871	RPP40	100	87.328	Heterocephalus_glaber_female
ENSUMAG00000018639	RPP40	94	87.328	ENSHGLG00100002080	RPP40	100	87.328	Heterocephalus_glaber_male
ENSUMAG00000018639	RPP40	90	31.805	ENSHCOG00000013264	-	93	31.805	Hippocampus_comes
ENSUMAG00000018639	RPP40	93	46.111	ENSIPUG00000008951	RPP40	99	46.111	Ictalurus_punctatus
ENSUMAG00000018639	RPP40	94	88.154	ENSSTOG00000011199	RPP40	100	88.154	Ictidomys_tridecemlineatus
ENSUMAG00000018639	RPP40	94	81.543	ENSJJAG00000020629	Rpp40	100	81.543	Jaculus_jaculus
ENSUMAG00000018639	RPP40	92	37.255	ENSKMAG00000019358	rpp40	99	37.255	Kryptolebias_marmoratus
ENSUMAG00000018639	RPP40	92	39.496	ENSLBEG00000022724	rpp40	99	39.496	Labrus_bergylta
ENSUMAG00000018639	RPP40	93	58.889	ENSLACG00000014848	RPP40	99	58.889	Latimeria_chalumnae
ENSUMAG00000018639	RPP40	94	52.342	ENSLOCG00000011650	rpp40	100	52.342	Lepisosteus_oculatus
ENSUMAG00000018639	RPP40	78	87.789	ENSLAFG00000007530	RPP40	100	87.789	Loxodonta_africana
ENSUMAG00000018639	RPP40	94	86.226	ENSMFAG00000043100	RPP40	100	86.226	Macaca_fascicularis
ENSUMAG00000018639	RPP40	94	86.501	ENSMMUG00000004966	RPP40	100	86.501	Macaca_mulatta
ENSUMAG00000018639	RPP40	94	86.777	ENSMNEG00000041986	RPP40	100	86.777	Macaca_nemestrina
ENSUMAG00000018639	RPP40	92	84.308	ENSMLEG00000040851	RPP40	100	84.308	Mandrillus_leucophaeus
ENSUMAG00000018639	RPP40	92	39.496	ENSMAMG00000019551	rpp40	98	39.496	Mastacembelus_armatus
ENSUMAG00000018639	RPP40	93	39.058	ENSMZEG00005019475	rpp40	99	39.058	Maylandia_zebra
ENSUMAG00000018639	RPP40	93	61.667	ENSMGAG00000004009	RPP40	99	61.667	Meleagris_gallopavo
ENSUMAG00000018639	RPP40	94	86.226	ENSMAUG00000010268	Rpp40	100	86.226	Mesocricetus_auratus
ENSUMAG00000018639	RPP40	100	84.264	ENSMICG00000003297	RPP40	100	84.264	Microcebus_murinus
ENSUMAG00000018639	RPP40	94	84.298	ENSMOCG00000000305	Rpp40	100	84.298	Microtus_ochrogaster
ENSUMAG00000018639	RPP40	92	33.894	ENSMMOG00000020591	-	99	33.894	Mola_mola
ENSUMAG00000018639	RPP40	94	81.044	ENSMODG00000009826	RPP40	100	81.044	Monodelphis_domestica
ENSUMAG00000018639	RPP40	92	38.375	ENSMALG00000020133	rpp40	99	38.375	Monopterus_albus
ENSUMAG00000018639	RPP40	94	85.950	MGP_CAROLIEiJ_G0018429	Rpp40	100	85.950	Mus_caroli
ENSUMAG00000018639	RPP40	94	86.777	ENSMUSG00000021418	Rpp40	100	86.777	Mus_musculus
ENSUMAG00000018639	RPP40	94	86.226	MGP_PahariEiJ_G0019497	Rpp40	100	86.226	Mus_pahari
ENSUMAG00000018639	RPP40	94	86.501	MGP_SPRETEiJ_G0019309	Rpp40	100	86.501	Mus_spretus
ENSUMAG00000018639	RPP40	94	95.068	ENSMPUG00000000530	RPP40	100	91.282	Mustela_putorius_furo
ENSUMAG00000018639	RPP40	94	89.532	ENSMLUG00000000501	RPP40	100	89.532	Myotis_lucifugus
ENSUMAG00000018639	RPP40	94	87.328	ENSNGAG00000023955	-	100	87.328	Nannospalax_galili
ENSUMAG00000018639	RPP40	89	76.590	ENSNGAG00000022529	-	100	76.590	Nannospalax_galili
ENSUMAG00000018639	RPP40	82	34.675	ENSNBRG00000017465	rpp40	86	34.862	Neolamprologus_brichardi
ENSUMAG00000018639	RPP40	94	85.950	ENSNLEG00000034397	RPP40	100	85.950	Nomascus_leucogenys
ENSUMAG00000018639	RPP40	94	75.482	ENSMEUG00000005300	RPP40	100	75.482	Notamacropus_eugenii
ENSUMAG00000018639	RPP40	94	83.747	ENSODEG00000007255	-	100	83.747	Octodon_degus
ENSUMAG00000018639	RPP40	83	76.708	ENSODEG00000006170	-	100	76.708	Octodon_degus
ENSUMAG00000018639	RPP40	94	79.890	ENSODEG00000018153	-	100	79.890	Octodon_degus
ENSUMAG00000018639	RPP40	93	38.227	ENSONIG00000014016	rpp40	99	38.227	Oreochromis_niloticus
ENSUMAG00000018639	RPP40	78	75.248	ENSOANG00000001200	RPP40	99	75.248	Ornithorhynchus_anatinus
ENSUMAG00000018639	RPP40	93	76.731	ENSOCUG00000000354	RPP40	99	76.731	Oryctolagus_cuniculus
ENSUMAG00000018639	RPP40	93	36.667	ENSORLG00000008242	-	100	36.667	Oryzias_latipes
ENSUMAG00000018639	RPP40	97	35.544	ENSORLG00020013745	-	95	35.544	Oryzias_latipes_hni
ENSUMAG00000018639	RPP40	93	36.944	ENSORLG00015000887	-	100	36.944	Oryzias_latipes_hsok
ENSUMAG00000018639	RPP40	93	36.944	ENSOMEG00000002747	rpp40	100	36.944	Oryzias_melastigma
ENSUMAG00000018639	RPP40	94	88.705	ENSOGAG00000006055	RPP40	100	88.705	Otolemur_garnettii
ENSUMAG00000018639	RPP40	86	83.784	ENSOARG00000018783	RPP40	100	86.139	Ovis_aries
ENSUMAG00000018639	RPP40	94	86.777	ENSPPAG00000023703	RPP40	100	86.777	Pan_paniscus
ENSUMAG00000018639	RPP40	94	92.562	ENSPPRG00000005612	RPP40	100	92.562	Panthera_pardus
ENSUMAG00000018639	RPP40	94	84.573	ENSPTIG00000018847	RPP40	100	84.573	Panthera_tigris_altaica
ENSUMAG00000018639	RPP40	94	87.052	ENSPTRG00000017690	RPP40	100	87.052	Pan_troglodytes
ENSUMAG00000018639	RPP40	94	86.777	ENSPANG00000017865	RPP40	100	86.777	Papio_anubis
ENSUMAG00000018639	RPP40	92	50.838	ENSPKIG00000006311	rpp40	99	50.838	Paramormyrops_kingsleyae
ENSUMAG00000018639	RPP40	62	68.950	ENSPSIG00000007854	RPP40	100	69.369	Pelodiscus_sinensis
ENSUMAG00000018639	RPP40	87	75.668	ENSPEMG00000020809	Rpp40	91	75.668	Peromyscus_maniculatus_bairdii
ENSUMAG00000018639	RPP40	71	46.350	ENSPMAG00000008412	rpp40	99	46.350	Petromyzon_marinus
ENSUMAG00000018639	RPP40	94	81.818	ENSPCIG00000010682	RPP40	100	81.818	Phascolarctos_cinereus
ENSUMAG00000018639	RPP40	92	35.655	ENSPFOG00000011460	rpp40	98	35.655	Poecilia_formosa
ENSUMAG00000018639	RPP40	92	35.854	ENSPLAG00000001334	rpp40	99	35.854	Poecilia_latipinna
ENSUMAG00000018639	RPP40	92	35.854	ENSPMEG00000007721	rpp40	99	35.854	Poecilia_mexicana
ENSUMAG00000018639	RPP40	92	36.975	ENSPREG00000009215	rpp40	99	36.975	Poecilia_reticulata
ENSUMAG00000018639	RPP40	94	86.501	ENSPPYG00000016194	RPP40	100	86.501	Pongo_abelii
ENSUMAG00000018639	RPP40	94	89.256	ENSPCOG00000003907	RPP40	100	89.256	Propithecus_coquereli
ENSUMAG00000018639	RPP40	94	93.388	ENSPVAG00000011325	RPP40	100	93.388	Pteropus_vampyrus
ENSUMAG00000018639	RPP40	77	38.926	ENSPNYG00000004432	rpp40	98	38.926	Pundamilia_nyererei
ENSUMAG00000018639	RPP40	92	47.207	ENSPNAG00000019125	rpp40	99	47.207	Pygocentrus_nattereri
ENSUMAG00000018639	RPP40	94	85.124	ENSRNOG00000016226	Rpp40	100	85.124	Rattus_norvegicus
ENSUMAG00000018639	RPP40	94	87.052	ENSRBIG00000035800	RPP40	100	87.052	Rhinopithecus_bieti
ENSUMAG00000018639	RPP40	94	87.052	ENSRROG00000039116	RPP40	100	87.052	Rhinopithecus_roxellana
ENSUMAG00000018639	RPP40	94	85.675	ENSSBOG00000020297	RPP40	100	85.675	Saimiri_boliviensis_boliviensis
ENSUMAG00000018639	RPP40	72	78.777	ENSSHAG00000002102	RPP40	100	78.777	Sarcophilus_harrisii
ENSUMAG00000018639	RPP40	95	48.370	ENSSFOG00015001142	rpp40	82	48.370	Scleropages_formosus
ENSUMAG00000018639	RPP40	92	38.095	ENSSDUG00000007202	rpp40	99	38.095	Seriola_dumerili
ENSUMAG00000018639	RPP40	92	38.375	ENSSLDG00000017563	rpp40	99	38.375	Seriola_lalandi_dorsalis
ENSUMAG00000018639	RPP40	76	68.136	ENSSPUG00000018950	-	100	68.136	Sphenodon_punctatus
ENSUMAG00000018639	RPP40	93	68.889	ENSSPUG00000017487	-	99	68.889	Sphenodon_punctatus
ENSUMAG00000018639	RPP40	92	38.375	ENSSPAG00000022716	rpp40	99	38.375	Stegastes_partitus
ENSUMAG00000018639	RPP40	94	87.603	ENSSSCG00000000998	RPP40	100	87.603	Sus_scrofa
ENSUMAG00000018639	RPP40	93	65.922	ENSTGUG00000002258	-	100	65.922	Taeniopygia_guttata
ENSUMAG00000018639	RPP40	50	68.927	ENSTGUG00000015246	-	100	68.927	Taeniopygia_guttata
ENSUMAG00000018639	RPP40	91	39.943	ENSTRUG00000003755	rpp40	98	39.943	Takifugu_rubripes
ENSUMAG00000018639	RPP40	91	37.677	ENSTNIG00000003077	rpp40	98	37.677	Tetraodon_nigroviridis
ENSUMAG00000018639	RPP40	65	60.000	ENSTBEG00000014467	-	73	60.000	Tupaia_belangeri
ENSUMAG00000018639	RPP40	94	82.597	ENSTTRG00000007319	RPP40	100	82.597	Tursiops_truncatus
ENSUMAG00000018639	RPP40	94	100.000	ENSUAMG00000002159	RPP40	100	100.000	Ursus_americanus
ENSUMAG00000018639	RPP40	76	65.986	ENSVPAG00000004652	-	99	65.986	Vicugna_pacos
ENSUMAG00000018639	RPP40	94	94.490	ENSVVUG00000005451	RPP40	100	94.490	Vulpes_vulpes
ENSUMAG00000018639	RPP40	94	53.699	ENSXETG00000017617	rpp40	100	53.699	Xenopus_tropicalis
ENSUMAG00000018639	RPP40	51	44.167	ENSXCOG00000019991	-	87	31.232	Xiphophorus_couchianus
ENSUMAG00000018639	RPP40	92	30.387	ENSXMAG00000024940	rpp40	98	30.110	Xiphophorus_maculatus