EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000018830 (Gene tree)
Gene ID: 103669570
Gene Symbol: RPUSD3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 6848 bases
Position: chrKK498639.1:8165510-8172357
Accession: 103669570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000025841	PseudoU_synth_2	PF00849.22	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000030599	RPUSD3-201	1567	-	ENSUMAP00000025841	352 (aa)	XP_008696126	UPI0004E02585

Gene Model

Click here to download ENSUMAG00000018830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000018830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000018830	RPUSD3	80	30.068	ENSUMAG00000002219	RPUSD4	73	30.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000018830	RPUSD3	100	79.830	ENSG00000156990	RPUSD3	100	79.830	Homo_sapiens
ENSUMAG00000018830	RPUSD3	100	96.307	ENSAMEG00000016227	RPUSD3	100	96.307	Ailuropoda_melanoleuca
ENSUMAG00000018830	RPUSD3	79	53.214	ENSACAG00000009836	RPUSD3	79	53.214	Anolis_carolinensis
ENSUMAG00000018830	RPUSD3	78	59.310	ENSANAG00000007127	-	98	59.310	Aotus_nancymaae
ENSUMAG00000018830	RPUSD3	54	80.423	ENSANAG00000038118	-	90	80.423	Aotus_nancymaae
ENSUMAG00000018830	RPUSD3	57	81.500	ENSANAG00000019945	-	80	81.500	Aotus_nancymaae
ENSUMAG00000018830	RPUSD3	98	79.651	ENSBTAG00000007968	RPUSD3	100	79.651	Bos_taurus
ENSUMAG00000018830	RPUSD3	100	90.625	ENSCAFG00000029733	RPUSD3	100	90.625	Canis_familiaris
ENSUMAG00000018830	RPUSD3	100	90.625	ENSCAFG00020008582	RPUSD3	100	90.625	Canis_lupus_dingo
ENSUMAG00000018830	RPUSD3	98	78.488	ENSCHIG00000026027	RPUSD3	100	78.488	Capra_hircus
ENSUMAG00000018830	RPUSD3	96	76.540	ENSTSYG00000009994	RPUSD3	97	76.540	Carlito_syrichta
ENSUMAG00000018830	RPUSD3	75	79.087	ENSCAPG00000017559	RPUSD3	99	79.087	Cavia_aperea
ENSUMAG00000018830	RPUSD3	99	66.476	ENSCPOG00000037956	RPUSD3	92	66.476	Cavia_porcellus
ENSUMAG00000018830	RPUSD3	100	77.841	ENSCCAG00000029530	RPUSD3	100	77.841	Cebus_capucinus
ENSUMAG00000018830	RPUSD3	100	79.261	ENSCATG00000036939	RPUSD3	100	79.261	Cercocebus_atys
ENSUMAG00000018830	RPUSD3	100	79.545	ENSCSAG00000010506	RPUSD3	100	79.545	Chlorocebus_sabaeus
ENSUMAG00000018830	RPUSD3	50	83.036	ENSCHOG00000010151	-	67	83.036	Choloepus_hoffmanni
ENSUMAG00000018830	RPUSD3	73	53.307	ENSCPBG00000008825	RPUSD3	95	52.529	Chrysemys_picta_bellii
ENSUMAG00000018830	RPUSD3	100	79.261	ENSCANG00000040711	RPUSD3	100	79.261	Colobus_angolensis_palliatus
ENSUMAG00000018830	RPUSD3	99	72.334	ENSCGRG00001004923	Rpusd3	96	72.334	Cricetulus_griseus_chok1gshd
ENSUMAG00000018830	RPUSD3	97	73.021	ENSCGRG00000018315	Rpusd3	99	73.021	Cricetulus_griseus_crigri
ENSUMAG00000018830	RPUSD3	99	73.504	ENSDNOG00000039160	RPUSD3	93	73.504	Dasypus_novemcinctus
ENSUMAG00000018830	RPUSD3	74	75.373	ENSDORG00000026827	Rpusd3	92	75.373	Dipodomys_ordii
ENSUMAG00000018830	RPUSD3	100	73.580	ENSETEG00000006538	RPUSD3	99	73.580	Echinops_telfairi
ENSUMAG00000018830	RPUSD3	67	35.246	ENSEBUG00000015605	RPUSD3	78	35.246	Eptatretus_burgeri
ENSUMAG00000018830	RPUSD3	100	83.523	ENSEASG00005014160	RPUSD3	98	83.523	Equus_asinus_asinus
ENSUMAG00000018830	RPUSD3	100	82.955	ENSECAG00000019988	RPUSD3	98	82.955	Equus_caballus
ENSUMAG00000018830	RPUSD3	94	60.651	ENSEEUG00000007353	RPUSD3	95	60.767	Erinaceus_europaeus
ENSUMAG00000018830	RPUSD3	100	89.205	ENSFCAG00000014199	RPUSD3	100	89.205	Felis_catus
ENSUMAG00000018830	RPUSD3	77	48.718	ENSFALG00000012968	RPUSD3	99	48.718	Ficedula_albicollis
ENSUMAG00000018830	RPUSD3	75	78.868	ENSFDAG00000008350	RPUSD3	82	78.868	Fukomys_damarensis
ENSUMAG00000018830	RPUSD3	74	55.133	ENSGAGG00000007493	RPUSD3	82	54.373	Gopherus_agassizii
ENSUMAG00000018830	RPUSD3	100	79.830	ENSGGOG00000013120	RPUSD3	100	79.830	Gorilla_gorilla
ENSUMAG00000018830	RPUSD3	84	76.271	ENSHGLG00000011722	RPUSD3	74	76.271	Heterocephalus_glaber_female
ENSUMAG00000018830	RPUSD3	84	76.271	ENSHGLG00100016038	RPUSD3	74	76.271	Heterocephalus_glaber_male
ENSUMAG00000018830	RPUSD3	100	76.136	ENSSTOG00000002125	RPUSD3	100	76.136	Ictidomys_tridecemlineatus
ENSUMAG00000018830	RPUSD3	98	70.930	ENSJJAG00000012679	Rpusd3	100	70.930	Jaculus_jaculus
ENSUMAG00000018830	RPUSD3	96	79.351	ENSLAFG00000017501	RPUSD3	99	79.351	Loxodonta_africana
ENSUMAG00000018830	RPUSD3	100	78.977	ENSMFAG00000032407	RPUSD3	100	78.977	Macaca_fascicularis
ENSUMAG00000018830	RPUSD3	100	75.284	ENSMMUG00000010628	RPUSD3	97	81.731	Macaca_mulatta
ENSUMAG00000018830	RPUSD3	100	78.693	ENSMNEG00000040308	RPUSD3	100	78.693	Macaca_nemestrina
ENSUMAG00000018830	RPUSD3	100	79.261	ENSMLEG00000033940	RPUSD3	100	79.261	Mandrillus_leucophaeus
ENSUMAG00000018830	RPUSD3	98	73.547	ENSMAUG00000015473	Rpusd3	100	73.547	Mesocricetus_auratus
ENSUMAG00000018830	RPUSD3	96	79.056	ENSMICG00000002315	RPUSD3	99	79.056	Microcebus_murinus
ENSUMAG00000018830	RPUSD3	98	70.640	ENSMOCG00000022613	Rpusd3	100	70.640	Microtus_ochrogaster
ENSUMAG00000018830	RPUSD3	94	57.402	ENSMODG00000005210	RPUSD3	86	56.061	Monodelphis_domestica
ENSUMAG00000018830	RPUSD3	98	72.093	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.093	Mus_caroli
ENSUMAG00000018830	RPUSD3	98	72.674	ENSMUSG00000051169	Rpusd3	100	72.674	Mus_musculus
ENSUMAG00000018830	RPUSD3	98	72.674	MGP_PahariEiJ_G0022476	Rpusd3	100	72.674	Mus_pahari
ENSUMAG00000018830	RPUSD3	98	72.093	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.093	Mus_spretus
ENSUMAG00000018830	RPUSD3	100	88.636	ENSMPUG00000017132	RPUSD3	100	88.636	Mustela_putorius_furo
ENSUMAG00000018830	RPUSD3	98	83.237	ENSMLUG00000006135	RPUSD3	99	83.237	Myotis_lucifugus
ENSUMAG00000018830	RPUSD3	97	71.261	ENSNGAG00000023704	Rpusd3	99	71.261	Nannospalax_galili
ENSUMAG00000018830	RPUSD3	100	65.625	ENSNLEG00000004214	RPUSD3	95	82.178	Nomascus_leucogenys
ENSUMAG00000018830	RPUSD3	74	64.368	ENSMEUG00000013098	-	100	64.368	Notamacropus_eugenii
ENSUMAG00000018830	RPUSD3	95	62.130	ENSOPRG00000002300	RPUSD3	96	62.130	Ochotona_princeps
ENSUMAG00000018830	RPUSD3	75	79.167	ENSODEG00000018137	RPUSD3	91	79.167	Octodon_degus
ENSUMAG00000018830	RPUSD3	81	49.301	ENSOANG00000012081	-	99	48.592	Ornithorhynchus_anatinus
ENSUMAG00000018830	RPUSD3	98	67.236	ENSOCUG00000027885	RPUSD3	100	67.236	Oryctolagus_cuniculus
ENSUMAG00000018830	RPUSD3	89	80.892	ENSOGAG00000012592	RPUSD3	100	80.892	Otolemur_garnettii
ENSUMAG00000018830	RPUSD3	99	80.057	ENSOARG00000005928	RPUSD3	99	80.057	Ovis_aries
ENSUMAG00000018830	RPUSD3	99	80.516	ENSPPAG00000038083	RPUSD3	99	80.516	Pan_paniscus
ENSUMAG00000018830	RPUSD3	100	89.205	ENSPPRG00000024433	RPUSD3	100	89.205	Panthera_pardus
ENSUMAG00000018830	RPUSD3	98	90.407	ENSPTIG00000006828	RPUSD3	100	90.407	Panthera_tigris_altaica
ENSUMAG00000018830	RPUSD3	99	80.229	ENSPTRG00000051760	RPUSD3	99	80.229	Pan_troglodytes
ENSUMAG00000018830	RPUSD3	100	79.830	ENSPANG00000023885	RPUSD3	100	79.830	Papio_anubis
ENSUMAG00000018830	RPUSD3	98	72.384	ENSPEMG00000017245	Rpusd3	100	72.384	Peromyscus_maniculatus_bairdii
ENSUMAG00000018830	RPUSD3	89	60.577	ENSPCIG00000021901	RPUSD3	89	59.164	Phascolarctos_cinereus
ENSUMAG00000018830	RPUSD3	99	79.943	ENSPPYG00000013676	RPUSD3	99	79.943	Pongo_abelii
ENSUMAG00000018830	RPUSD3	82	62.671	ENSPCAG00000013731	-	100	62.671	Procavia_capensis
ENSUMAG00000018830	RPUSD3	100	80.682	ENSPCOG00000018314	RPUSD3	100	80.682	Propithecus_coquereli
ENSUMAG00000018830	RPUSD3	100	80.114	ENSPVAG00000011107	RPUSD3	100	80.114	Pteropus_vampyrus
ENSUMAG00000018830	RPUSD3	98	68.314	ENSRNOG00000009084	Rpusd3	100	68.314	Rattus_norvegicus
ENSUMAG00000018830	RPUSD3	99	80.286	ENSRBIG00000041230	RPUSD3	99	80.286	Rhinopithecus_bieti
ENSUMAG00000018830	RPUSD3	99	80.571	ENSRROG00000043328	RPUSD3	99	80.571	Rhinopithecus_roxellana
ENSUMAG00000018830	RPUSD3	100	77.557	ENSSBOG00000036106	RPUSD3	100	77.557	Saimiri_boliviensis_boliviensis
ENSUMAG00000018830	RPUSD3	88	59.416	ENSSHAG00000015536	RPUSD3	99	57.792	Sarcophilus_harrisii
ENSUMAG00000018830	RPUSD3	100	80.398	ENSSSCG00000011555	RPUSD3	100	80.398	Sus_scrofa
ENSUMAG00000018830	RPUSD3	62	49.309	ENSTGUG00000008744	RPUSD3	93	49.309	Taeniopygia_guttata
ENSUMAG00000018830	RPUSD3	82	77.163	ENSTBEG00000000176	RPUSD3	100	77.163	Tupaia_belangeri
ENSUMAG00000018830	RPUSD3	100	80.966	ENSTTRG00000007544	RPUSD3	100	80.966	Tursiops_truncatus
ENSUMAG00000018830	RPUSD3	89	99.363	ENSUAMG00000011354	RPUSD3	98	99.363	Ursus_americanus
ENSUMAG00000018830	RPUSD3	98	90.988	ENSVVUG00000023735	RPUSD3	100	90.988	Vulpes_vulpes
ENSUMAG00000018830	RPUSD3	80	48.936	ENSXETG00000023546	rpusd3	99	48.936	Xenopus_tropicalis