EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000019336 (Gene tree)
Gene ID: 103678589
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 883
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 1011 bases
Position: chrKK498754.1:14506171-14507181
Accession: 103678589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	1	11
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	2	11
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	3	11
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	4	11
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	5	11
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	6	11
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	7	11
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	8	11
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	9	11
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	10	11
ENSUMAP00000026570	zf-C2H2	PF00096.26	9e-62	11	11
ENSUMAP00000026570	zf-met	PF12874.7	9.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000031451	-	1011	-	ENSUMAP00000026570	336 (aa)	XP_008706192	UPI0004E004AE

Gene Model

Click here to download ENSUMAG00000019336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000019336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000019336	-	100	54.012	ENSUMAG00000004061	-	95	54.012
ENSUMAG00000019336	-	99	54.221	ENSUMAG00000023059	ZNF226	74	54.790
ENSUMAG00000019336	-	99	54.921	ENSUMAG00000023930	ZNF454	78	54.921
ENSUMAG00000019336	-	99	47.126	ENSUMAG00000014213	ZNF317	76	47.126
ENSUMAG00000019336	-	99	51.887	ENSUMAG00000002662	ZNF574	73	50.909
ENSUMAG00000019336	-	98	51.254	ENSUMAG00000007135	-	87	51.254
ENSUMAG00000019336	-	99	44.295	ENSUMAG00000003733	PRDM5	85	40.426
ENSUMAG00000019336	-	99	55.689	ENSUMAG00000023068	ZNF235	66	55.689
ENSUMAG00000019336	-	91	42.453	ENSUMAG00000006525	SNAI2	52	42.453
ENSUMAG00000019336	-	96	42.202	ENSUMAG00000019514	WT1	50	42.202
ENSUMAG00000019336	-	97	52.878	ENSUMAG00000019496	-	98	52.878
ENSUMAG00000019336	-	99	54.082	ENSUMAG00000023056	-	97	54.082
ENSUMAG00000019336	-	100	49.206	ENSUMAG00000017193	ZFP69B	73	49.206
ENSUMAG00000019336	-	93	36.538	ENSUMAG00000016941	GTF3A	87	36.538
ENSUMAG00000019336	-	99	44.776	ENSUMAG00000011251	-	100	44.776
ENSUMAG00000019336	-	98	53.774	ENSUMAG00000007577	-	98	53.774
ENSUMAG00000019336	-	99	54.088	ENSUMAG00000004054	-	95	54.088
ENSUMAG00000019336	-	96	53.750	ENSUMAG00000023065	ZNF233	77	43.768
ENSUMAG00000019336	-	100	55.389	ENSUMAG00000004051	-	96	55.389
ENSUMAG00000019336	-	100	32.065	ENSUMAG00000014051	ZNF646	76	32.065
ENSUMAG00000019336	-	98	39.394	ENSUMAG00000001754	ZFAT	50	39.394
ENSUMAG00000019336	-	100	50.980	ENSUMAG00000013351	ZNF768	60	48.739
ENSUMAG00000019336	-	100	58.621	ENSUMAG00000024767	-	74	58.621
ENSUMAG00000019336	-	99	38.129	ENSUMAG00000004755	-	66	38.129
ENSUMAG00000019336	-	99	49.536	ENSUMAG00000024602	-	99	49.536
ENSUMAG00000019336	-	99	56.954	ENSUMAG00000014322	ZFP1	80	56.954
ENSUMAG00000019336	-	99	41.593	ENSUMAG00000024271	ZFP64	71	34.783
ENSUMAG00000019336	-	98	43.827	ENSUMAG00000007151	-	86	43.827
ENSUMAG00000019336	-	91	42.991	ENSUMAG00000024458	SNAI1	79	42.991
ENSUMAG00000019336	-	97	35.274	ENSUMAG00000004744	-	58	35.274
ENSUMAG00000019336	-	97	40.667	ENSUMAG00000025358	ZBTB41	60	40.667
ENSUMAG00000019336	-	97	44.706	ENSUMAG00000015722	ZNF770	97	44.706
ENSUMAG00000019336	-	98	54.839	ENSUMAG00000017894	-	71	54.839

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000019336	-	99	53.140	ENSACLG00000020975	-	85	51.852	Astatotilapia_calliptera
ENSUMAG00000019336	-	99	56.318	ENSAMXG00000017609	-	73	56.318	Astyanax_mexicanus
ENSUMAG00000019336	-	96	44.625	ENSEBUG00000005258	-	82	44.625	Eptatretus_burgeri
ENSUMAG00000019336	-	96	46.906	ENSEBUG00000010952	-	72	46.906	Eptatretus_burgeri
ENSUMAG00000019336	-	99	49.062	ENSEBUG00000009208	-	64	50.629	Eptatretus_burgeri
ENSUMAG00000019336	-	97	53.795	ENSGAGG00000001387	-	56	53.795	Gopherus_agassizii
ENSUMAG00000019336	-	100	61.465	ENSPCIG00000018955	-	89	61.465	Phascolarctos_cinereus
ENSUMAG00000019336	-	100	61.465	ENSSHAG00000014216	-	85	61.465	Sarcophilus_harrisii
ENSUMAG00000019336	-	97	56.561	ENSTGUG00000014292	-	99	56.561	Taeniopygia_guttata
ENSUMAG00000019336	-	97	55.124	ENSTGUG00000016220	-	100	55.124	Taeniopygia_guttata
ENSUMAG00000019336	-	97	57.219	ENSTGUG00000018385	-	100	57.219	Taeniopygia_guttata