EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000019375 (Gene tree)
Gene ID: 103678595
Gene Symbol: PRPF4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 17204 bases
Position: chrKK498754.1:14732575-14749778
Accession: 103678595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000026613	PRP4	PF08799.11	5.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000031503	PRPF4-201	2680	-	ENSUMAP00000026613	519 (aa)	XP_008706204	UPI0004DFDD23

Gene Model

Click here to download ENSUMAG00000019375's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000019375's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000019375	PRPF4	56	31.111	ENSUMAG00000021482	POC1A	70	31.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000019375	PRPF4	100	98.656	ENSG00000136875	PRPF4	100	98.656	Homo_sapiens
ENSUMAG00000019375	PRPF4	96	76.778	ENSAPOG00000014132	prpf4	98	76.778	Acanthochromis_polyacanthus
ENSUMAG00000019375	PRPF4	100	99.232	ENSAMEG00000013048	PRPF4	98	99.232	Ailuropoda_melanoleuca
ENSUMAG00000019375	PRPF4	96	76.587	ENSACIG00000005579	prpf4	99	76.587	Amphilophus_citrinellus
ENSUMAG00000019375	PRPF4	96	76.238	ENSAOCG00000005457	prpf4	99	76.238	Amphiprion_ocellaris
ENSUMAG00000019375	PRPF4	96	76.040	ENSAPEG00000000776	prpf4	99	76.040	Amphiprion_percula
ENSUMAG00000019375	PRPF4	96	75.992	ENSATEG00000023013	prpf4	99	75.992	Anabas_testudineus
ENSUMAG00000019375	PRPF4	98	90.039	ENSAPLG00000006534	PRPF4	96	90.039	Anas_platyrhynchos
ENSUMAG00000019375	PRPF4	100	89.484	ENSACAG00000015110	PRPF4	100	89.484	Anolis_carolinensis
ENSUMAG00000019375	PRPF4	100	99.040	ENSANAG00000022464	PRPF4	96	99.040	Aotus_nancymaae
ENSUMAG00000019375	PRPF4	96	76.389	ENSACLG00000019031	prpf4	99	76.389	Astatotilapia_calliptera
ENSUMAG00000019375	PRPF4	97	61.804	ENSAMXG00000006756	prpf4	99	72.871	Astyanax_mexicanus
ENSUMAG00000019375	PRPF4	100	98.273	ENSBTAG00000004571	PRPF4	100	98.273	Bos_taurus
ENSUMAG00000019375	PRPF4	90	43.882	WBGene00007972	prp-4	96	43.789	Caenorhabditis_elegans
ENSUMAG00000019375	PRPF4	100	98.851	ENSCJAG00000017856	PRPF4	100	98.851	Callithrix_jacchus
ENSUMAG00000019375	PRPF4	100	98.848	ENSCAFG00000003224	PRPF4	97	98.848	Canis_familiaris
ENSUMAG00000019375	PRPF4	100	98.848	ENSCAFG00020022637	PRPF4	100	98.848	Canis_lupus_dingo
ENSUMAG00000019375	PRPF4	100	98.467	ENSCHIG00000024648	-	100	98.467	Capra_hircus
ENSUMAG00000019375	PRPF4	100	98.848	ENSTSYG00000010366	PRPF4	100	98.848	Carlito_syrichta
ENSUMAG00000019375	PRPF4	88	87.828	ENSCAPG00000008935	PRPF4	97	87.828	Cavia_aperea
ENSUMAG00000019375	PRPF4	100	98.273	ENSCPOG00000010747	-	100	98.273	Cavia_porcellus
ENSUMAG00000019375	PRPF4	100	91.747	ENSCPOG00000014729	-	100	91.747	Cavia_porcellus
ENSUMAG00000019375	PRPF4	100	98.848	ENSCCAG00000028990	PRPF4	100	98.848	Cebus_capucinus
ENSUMAG00000019375	PRPF4	100	98.848	ENSCATG00000021552	PRPF4	100	98.848	Cercocebus_atys
ENSUMAG00000019375	PRPF4	100	98.464	ENSCLAG00000013448	PRPF4	100	98.464	Chinchilla_lanigera
ENSUMAG00000019375	PRPF4	87	95.133	ENSCHOG00000007233	PRPF4	100	95.133	Choloepus_hoffmanni
ENSUMAG00000019375	PRPF4	99	90.874	ENSCPBG00000019136	PRPF4	74	90.874	Chrysemys_picta_bellii
ENSUMAG00000019375	PRPF4	96	58.661	ENSCING00000001299	-	97	58.020	Ciona_intestinalis
ENSUMAG00000019375	PRPF4	96	56.944	ENSCSAVG00000009178	-	99	58.225	Ciona_savignyi
ENSUMAG00000019375	PRPF4	100	99.040	ENSCANG00000003246	PRPF4	100	99.040	Colobus_angolensis_palliatus
ENSUMAG00000019375	PRPF4	100	98.656	ENSCGRG00001016992	Prpf4	100	98.656	Cricetulus_griseus_chok1gshd
ENSUMAG00000019375	PRPF4	100	98.656	ENSCGRG00000017560	Prpf4	100	98.656	Cricetulus_griseus_crigri
ENSUMAG00000019375	PRPF4	97	75.248	ENSCSEG00000020451	prpf4	99	75.248	Cynoglossus_semilaevis
ENSUMAG00000019375	PRPF4	97	79.208	ENSDARG00000067639	prpf4	99	79.208	Danio_rerio
ENSUMAG00000019375	PRPF4	100	98.276	ENSDNOG00000013203	PRPF4	100	98.276	Dasypus_novemcinctus
ENSUMAG00000019375	PRPF4	100	98.656	ENSDORG00000026275	Prpf4	100	98.656	Dipodomys_ordii
ENSUMAG00000019375	PRPF4	87	56.018	FBgn0036733	U4-U6-60K	99	50.000	Drosophila_melanogaster
ENSUMAG00000019375	PRPF4	100	96.750	ENSETEG00000020389	PRPF4	100	96.750	Echinops_telfairi
ENSUMAG00000019375	PRPF4	95	72.350	ENSEBUG00000015229	prpf4	86	72.811	Eptatretus_burgeri
ENSUMAG00000019375	PRPF4	100	99.040	ENSEASG00005022678	PRPF4	100	99.040	Equus_asinus_asinus
ENSUMAG00000019375	PRPF4	100	99.040	ENSECAG00000007072	PRPF4	100	99.040	Equus_caballus
ENSUMAG00000019375	PRPF4	100	77.511	ENSEEUG00000007480	PRPF4	100	77.511	Erinaceus_europaeus
ENSUMAG00000019375	PRPF4	97	80.198	ENSELUG00000007510	prpf4	99	80.198	Esox_lucius
ENSUMAG00000019375	PRPF4	100	98.851	ENSFCAG00000005514	PRPF4	100	98.851	Felis_catus
ENSUMAG00000019375	PRPF4	98	87.668	ENSFALG00000005423	PRPF4	90	84.946	Ficedula_albicollis
ENSUMAG00000019375	PRPF4	100	98.273	ENSFDAG00000005839	PRPF4	100	98.273	Fukomys_damarensis
ENSUMAG00000019375	PRPF4	96	75.595	ENSFHEG00000001300	prpf4	99	75.595	Fundulus_heteroclitus
ENSUMAG00000019375	PRPF4	98	89.628	ENSGALG00000008857	PRPF4	95	89.628	Gallus_gallus
ENSUMAG00000019375	PRPF4	65	70.294	ENSGAFG00000012164	prpf4	70	70.294	Gambusia_affinis
ENSUMAG00000019375	PRPF4	96	69.048	ENSGACG00000015476	prpf4	99	68.254	Gasterosteus_aculeatus
ENSUMAG00000019375	PRPF4	99	90.680	ENSGAGG00000025029	PRPF4	95	90.680	Gopherus_agassizii
ENSUMAG00000019375	PRPF4	100	98.656	ENSGGOG00000006943	PRPF4	100	98.656	Gorilla_gorilla
ENSUMAG00000019375	PRPF4	96	76.190	ENSHBUG00000000562	prpf4	99	76.190	Haplochromis_burtoni
ENSUMAG00000019375	PRPF4	100	98.273	ENSHGLG00000015191	PRPF4	100	98.273	Heterocephalus_glaber_female
ENSUMAG00000019375	PRPF4	100	81.071	ENSHGLG00000016628	-	100	81.836	Heterocephalus_glaber_female
ENSUMAG00000019375	PRPF4	100	79.846	ENSHGLG00000003838	-	100	79.846	Heterocephalus_glaber_female
ENSUMAG00000019375	PRPF4	100	79.846	ENSHGLG00100005571	-	100	79.846	Heterocephalus_glaber_male
ENSUMAG00000019375	PRPF4	97	78.218	ENSIPUG00000017956	PRPF4	99	78.218	Ictalurus_punctatus
ENSUMAG00000019375	PRPF4	100	98.464	ENSSTOG00000027833	PRPF4	100	98.464	Ictidomys_tridecemlineatus
ENSUMAG00000019375	PRPF4	100	98.656	ENSJJAG00000008838	Prpf4	100	98.656	Jaculus_jaculus
ENSUMAG00000019375	PRPF4	96	75.595	ENSKMAG00000013236	prpf4	99	75.595	Kryptolebias_marmoratus
ENSUMAG00000019375	PRPF4	96	75.299	ENSLBEG00000020611	prpf4	99	75.299	Labrus_bergylta
ENSUMAG00000019375	PRPF4	99	79.769	ENSLACG00000016317	PRPF4	99	79.769	Latimeria_chalumnae
ENSUMAG00000019375	PRPF4	97	81.188	ENSLOCG00000000581	prpf4	99	81.188	Lepisosteus_oculatus
ENSUMAG00000019375	PRPF4	100	98.467	ENSLAFG00000018225	PRPF4	100	98.467	Loxodonta_africana
ENSUMAG00000019375	PRPF4	100	98.656	ENSMFAG00000039397	PRPF4	100	98.656	Macaca_fascicularis
ENSUMAG00000019375	PRPF4	100	98.848	ENSMMUG00000005844	PRPF4	100	98.848	Macaca_mulatta
ENSUMAG00000019375	PRPF4	100	88.292	ENSMNEG00000033737	PRPF4	100	88.292	Macaca_nemestrina
ENSUMAG00000019375	PRPF4	100	98.848	ENSMLEG00000040284	PRPF4	100	98.848	Mandrillus_leucophaeus
ENSUMAG00000019375	PRPF4	97	75.542	ENSMAMG00000020141	prpf4	99	75.542	Mastacembelus_armatus
ENSUMAG00000019375	PRPF4	96	76.389	ENSMZEG00005023205	prpf4	99	76.389	Maylandia_zebra
ENSUMAG00000019375	PRPF4	99	87.885	ENSMGAG00000001796	PRPF4	97	87.885	Meleagris_gallopavo
ENSUMAG00000019375	PRPF4	100	98.081	ENSMAUG00000018022	Prpf4	100	98.081	Mesocricetus_auratus
ENSUMAG00000019375	PRPF4	100	97.889	ENSMICG00000015022	PRPF4	100	97.701	Microcebus_murinus
ENSUMAG00000019375	PRPF4	100	98.081	ENSMOCG00000018273	Prpf4	100	98.081	Microtus_ochrogaster
ENSUMAG00000019375	PRPF4	97	74.257	ENSMMOG00000021177	prpf4	99	74.257	Mola_mola
ENSUMAG00000019375	PRPF4	100	94.264	ENSMODG00000025096	-	97	94.264	Monodelphis_domestica
ENSUMAG00000019375	PRPF4	100	94.073	ENSMODG00000004444	-	100	94.073	Monodelphis_domestica
ENSUMAG00000019375	PRPF4	96	75.992	ENSMALG00000013624	prpf4	99	75.992	Monopterus_albus
ENSUMAG00000019375	PRPF4	100	98.464	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.464	Mus_caroli
ENSUMAG00000019375	PRPF4	100	98.464	ENSMUSG00000066148	Prpf4	100	98.464	Mus_musculus
ENSUMAG00000019375	PRPF4	100	98.273	MGP_PahariEiJ_G0028413	Prpf4	100	98.273	Mus_pahari
ENSUMAG00000019375	PRPF4	100	98.464	MGP_SPRETEiJ_G0027042	Prpf4	100	98.464	Mus_spretus
ENSUMAG00000019375	PRPF4	100	99.232	ENSMPUG00000007883	PRPF4	100	99.232	Mustela_putorius_furo
ENSUMAG00000019375	PRPF4	100	96.545	ENSMLUG00000008626	-	97	96.545	Myotis_lucifugus
ENSUMAG00000019375	PRPF4	100	98.464	ENSMLUG00000015309	-	97	98.464	Myotis_lucifugus
ENSUMAG00000019375	PRPF4	100	93.282	ENSNGAG00000000468	Prpf4	100	93.282	Nannospalax_galili
ENSUMAG00000019375	PRPF4	96	76.587	ENSNBRG00000007972	prpf4	99	76.587	Neolamprologus_brichardi
ENSUMAG00000019375	PRPF4	100	99.040	ENSNLEG00000016647	PRPF4	100	99.040	Nomascus_leucogenys
ENSUMAG00000019375	PRPF4	99	94.553	ENSMEUG00000013256	PRPF4	100	94.553	Notamacropus_eugenii
ENSUMAG00000019375	PRPF4	100	98.084	ENSOPRG00000005302	PRPF4	100	98.084	Ochotona_princeps
ENSUMAG00000019375	PRPF4	100	98.656	ENSODEG00000018147	PRPF4	100	98.656	Octodon_degus
ENSUMAG00000019375	PRPF4	96	76.389	ENSONIG00000012671	prpf4	99	76.389	Oreochromis_niloticus
ENSUMAG00000019375	PRPF4	100	98.848	ENSOCUG00000005046	PRPF4	100	98.848	Oryctolagus_cuniculus
ENSUMAG00000019375	PRPF4	96	74.303	ENSORLG00000019641	prpf4	99	74.303	Oryzias_latipes
ENSUMAG00000019375	PRPF4	96	74.303	ENSORLG00020019438	prpf4	99	74.303	Oryzias_latipes_hni
ENSUMAG00000019375	PRPF4	96	74.105	ENSOMEG00000020941	prpf4	99	74.105	Oryzias_melastigma
ENSUMAG00000019375	PRPF4	100	93.666	ENSOGAG00000007802	PRPF4	98	93.666	Otolemur_garnettii
ENSUMAG00000019375	PRPF4	100	98.656	ENSOARG00000006319	PRPF4	97	98.656	Ovis_aries
ENSUMAG00000019375	PRPF4	100	98.656	ENSPPAG00000041797	PRPF4	100	98.656	Pan_paniscus
ENSUMAG00000019375	PRPF4	100	99.040	ENSPPRG00000014360	PRPF4	100	99.040	Panthera_pardus
ENSUMAG00000019375	PRPF4	100	99.040	ENSPTIG00000009574	PRPF4	100	99.040	Panthera_tigris_altaica
ENSUMAG00000019375	PRPF4	100	98.656	ENSPTRG00000021274	PRPF4	100	98.467	Pan_troglodytes
ENSUMAG00000019375	PRPF4	100	98.656	ENSPANG00000025776	PRPF4	96	98.656	Papio_anubis
ENSUMAG00000019375	PRPF4	97	80.594	ENSPKIG00000017259	prpf4	99	80.594	Paramormyrops_kingsleyae
ENSUMAG00000019375	PRPF4	100	89.443	ENSPSIG00000010713	PRPF4	91	89.961	Pelodiscus_sinensis
ENSUMAG00000019375	PRPF4	99	58.165	ENSPMGG00000000997	prpf4	99	58.165	Periophthalmus_magnuspinnatus
ENSUMAG00000019375	PRPF4	100	98.656	ENSPEMG00000024115	Prpf4	100	98.656	Peromyscus_maniculatus_bairdii
ENSUMAG00000019375	PRPF4	99	94.553	ENSPCIG00000003821	PRPF4	99	94.553	Phascolarctos_cinereus
ENSUMAG00000019375	PRPF4	96	69.428	ENSPFOG00000013524	prpf4	98	72.050	Poecilia_formosa
ENSUMAG00000019375	PRPF4	82	71.118	ENSPLAG00000011620	prpf4	96	71.118	Poecilia_latipinna
ENSUMAG00000019375	PRPF4	92	73.193	ENSPMEG00000006813	prpf4	98	73.193	Poecilia_mexicana
ENSUMAG00000019375	PRPF4	98	98.830	ENSPCAG00000002561	PRPF4	99	98.830	Procavia_capensis
ENSUMAG00000019375	PRPF4	100	98.464	ENSPCOG00000011975	PRPF4	100	98.464	Propithecus_coquereli
ENSUMAG00000019375	PRPF4	100	95.211	ENSPVAG00000004708	PRPF4	100	95.211	Pteropus_vampyrus
ENSUMAG00000019375	PRPF4	96	76.389	ENSPNYG00000008013	prpf4	99	76.389	Pundamilia_nyererei
ENSUMAG00000019375	PRPF4	97	79.802	ENSPNAG00000000697	prpf4	99	79.802	Pygocentrus_nattereri
ENSUMAG00000019375	PRPF4	100	98.273	ENSRNOG00000014777	Prpf4	100	98.273	Rattus_norvegicus
ENSUMAG00000019375	PRPF4	100	99.040	ENSRBIG00000040221	PRPF4	100	99.040	Rhinopithecus_bieti
ENSUMAG00000019375	PRPF4	100	99.040	ENSRROG00000040240	PRPF4	100	99.040	Rhinopithecus_roxellana
ENSUMAG00000019375	PRPF4	100	94.646	ENSSHAG00000017658	PRPF4	100	94.646	Sarcophilus_harrisii
ENSUMAG00000019375	PRPF4	97	81.386	ENSSFOG00015008963	prpf4	99	81.386	Scleropages_formosus
ENSUMAG00000019375	PRPF4	96	75.000	ENSSMAG00000008889	prpf4	99	75.000	Scophthalmus_maximus
ENSUMAG00000019375	PRPF4	96	72.908	ENSSDUG00000022083	prpf4	98	73.108	Seriola_dumerili
ENSUMAG00000019375	PRPF4	96	73.108	ENSSLDG00000008115	prpf4	98	73.307	Seriola_lalandi_dorsalis
ENSUMAG00000019375	PRPF4	100	89.635	ENSSPUG00000015582	PRPF4	100	89.635	Sphenodon_punctatus
ENSUMAG00000019375	PRPF4	96	70.891	ENSSPAG00000011286	prpf4	99	70.891	Stegastes_partitus
ENSUMAG00000019375	PRPF4	100	99.040	ENSSSCG00000024648	PRPF4	100	99.040	Sus_scrofa
ENSUMAG00000019375	PRPF4	95	89.858	ENSTGUG00000002623	PRPF4	100	90.184	Taeniopygia_guttata
ENSUMAG00000019375	PRPF4	97	74.901	ENSTRUG00000008853	prpf4	99	74.901	Takifugu_rubripes
ENSUMAG00000019375	PRPF4	97	74.257	ENSTNIG00000013250	prpf4	99	74.257	Tetraodon_nigroviridis
ENSUMAG00000019375	PRPF4	100	89.847	ENSTBEG00000000821	PRPF4	100	89.847	Tupaia_belangeri
ENSUMAG00000019375	PRPF4	82	98.837	ENSTTRG00000003246	PRPF4	85	98.837	Tursiops_truncatus
ENSUMAG00000019375	PRPF4	64	95.808	ENSUAMG00000018288	PRPF4	90	95.808	Ursus_americanus
ENSUMAG00000019375	PRPF4	100	98.276	ENSVPAG00000005281	PRPF4	100	98.276	Vicugna_pacos
ENSUMAG00000019375	PRPF4	100	97.714	ENSVVUG00000002476	PRPF4	100	97.830	Vulpes_vulpes
ENSUMAG00000019375	PRPF4	61	63.376	ENSXCOG00000006101	prpf4	82	64.903	Xiphophorus_couchianus
ENSUMAG00000019375	PRPF4	87	63.755	ENSXMAG00000002750	prpf4	98	64.811	Xiphophorus_maculatus