EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000019894 (Gene tree)
Gene ID: 103665012
Gene Symbol: VARS2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 12189 bases
Position: chrKK498605.1:17233805-17245993
Accession: 103665012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000027406	tRNA-synt_1g	PF09334.11	5.9e-14	1	1
ENSUMAP00000027399	tRNA-synt_1g	PF09334.11	7.3e-14	1	1
ENSUMAP00000027406	Anticodon_1	PF08264.13	6.7e-30	1	1
ENSUMAP00000027399	Anticodon_1	PF08264.13	9.4e-30	1	1
ENSUMAP00000027406	tRNA-synt_1	PF00133.22	2.3e-184	1	1
ENSUMAP00000027399	tRNA-synt_1	PF00133.22	2.7e-184	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000032403	VARS2-202	4423	XM_008692921	ENSUMAP00000027406	1062 (aa)	XP_008691143	UPI0004DFEAF5
ENSUMAT00000032395	VARS2-201	4570	-	ENSUMAP00000027399	1111 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000019894's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000019894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000019894	VARS2	83	61.032	ENSUMAG00000013486	VARS	78	56.298

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000019894	VARS2	93	51.172	ENSAPOG00000007396	vars2	97	50.519	Acanthochromis_polyacanthus
ENSUMAG00000019894	VARS2	100	96.234	ENSAMEG00000012997	VARS2	97	96.234	Ailuropoda_melanoleuca
ENSUMAG00000019894	VARS2	98	51.552	ENSACIG00000004344	vars2	99	51.552	Amphilophus_citrinellus
ENSUMAG00000019894	VARS2	93	51.022	ENSAOCG00000000476	vars2	97	50.236	Amphiprion_ocellaris
ENSUMAG00000019894	VARS2	94	50.913	ENSAPEG00000008646	vars2	95	50.330	Amphiprion_percula
ENSUMAG00000019894	VARS2	95	51.456	ENSATEG00000012291	vars2	97	51.437	Anabas_testudineus
ENSUMAG00000019894	VARS2	97	58.539	ENSACAG00000022093	VARS2	98	57.998	Anolis_carolinensis
ENSUMAG00000019894	VARS2	100	87.006	ENSANAG00000038018	VARS2	99	87.006	Aotus_nancymaae
ENSUMAG00000019894	VARS2	98	51.163	ENSACLG00000018673	vars2	99	51.163	Astatotilapia_calliptera
ENSUMAG00000019894	VARS2	95	53.149	ENSAMXG00000017773	vars2	97	52.869	Astyanax_mexicanus
ENSUMAG00000019894	VARS2	99	88.425	ENSBTAG00000010698	VARS2	99	88.302	Bos_taurus
ENSUMAG00000019894	VARS2	100	86.817	ENSCJAG00000019826	VARS2	99	86.817	Callithrix_jacchus
ENSUMAG00000019894	VARS2	100	89.831	ENSCAFG00000000454	VARS2	100	89.831	Canis_familiaris
ENSUMAG00000019894	VARS2	87	91.037	ENSCAFG00020019387	VARS2	95	91.066	Canis_lupus_dingo
ENSUMAG00000019894	VARS2	99	88.140	ENSCHIG00000007847	VARS2	99	88.019	Capra_hircus
ENSUMAG00000019894	VARS2	99	86.226	ENSTSYG00000009904	VARS2	99	86.226	Carlito_syrichta
ENSUMAG00000019894	VARS2	88	83.996	ENSCAPG00000017770	VARS2	99	83.996	Cavia_aperea
ENSUMAG00000019894	VARS2	99	82.879	ENSCPOG00000021834	VARS2	99	82.879	Cavia_porcellus
ENSUMAG00000019894	VARS2	100	87.288	ENSCCAG00000037907	VARS2	99	87.288	Cebus_capucinus
ENSUMAG00000019894	VARS2	99	87.830	ENSCATG00000032554	VARS2	99	87.830	Cercocebus_atys
ENSUMAG00000019894	VARS2	99	83.898	ENSCLAG00000002889	VARS2	99	83.898	Chinchilla_lanigera
ENSUMAG00000019894	VARS2	99	87.736	ENSCSAG00000008327	VARS2	99	87.736	Chlorocebus_sabaeus
ENSUMAG00000019894	VARS2	91	62.872	ENSCPBG00000021502	VARS2	96	68.370	Chrysemys_picta_bellii
ENSUMAG00000019894	VARS2	99	87.642	ENSCANG00000014991	VARS2	99	87.642	Colobus_angolensis_palliatus
ENSUMAG00000019894	VARS2	99	82.364	ENSCGRG00001021535	Vars2	100	82.109	Cricetulus_griseus_chok1gshd
ENSUMAG00000019894	VARS2	99	82.364	ENSCGRG00000014112	Vars2	100	82.109	Cricetulus_griseus_crigri
ENSUMAG00000019894	VARS2	86	57.666	ENSCSEG00000015432	vars2	96	57.666	Cynoglossus_semilaevis
ENSUMAG00000019894	VARS2	65	52.966	ENSCVAG00000017765	vars2	98	52.966	Cyprinodon_variegatus
ENSUMAG00000019894	VARS2	96	52.413	ENSDARG00000056717	vars2	97	52.413	Danio_rerio
ENSUMAG00000019894	VARS2	79	86.564	ENSDORG00000008516	Vars2	93	86.564	Dipodomys_ordii
ENSUMAG00000019894	VARS2	99	75.660	ENSETEG00000014844	VARS2	99	75.660	Echinops_telfairi
ENSUMAG00000019894	VARS2	99	89.330	ENSEASG00005019997	VARS2	97	89.330	Equus_asinus_asinus
ENSUMAG00000019894	VARS2	99	90.274	ENSECAG00000018202	VARS2	99	90.274	Equus_caballus
ENSUMAG00000019894	VARS2	69	85.437	ENSEEUG00000012591	-	68	85.437	Erinaceus_europaeus
ENSUMAG00000019894	VARS2	94	51.121	ENSELUG00000017824	vars2	97	51.552	Esox_lucius
ENSUMAG00000019894	VARS2	100	91.149	ENSFCAG00000010531	VARS2	100	91.149	Felis_catus
ENSUMAG00000019894	VARS2	99	83.081	ENSFDAG00000017216	VARS2	99	83.081	Fukomys_damarensis
ENSUMAG00000019894	VARS2	90	49.846	ENSFHEG00000013932	vars2	95	50.257	Fundulus_heteroclitus
ENSUMAG00000019894	VARS2	88	56.000	ENSGMOG00000018960	vars2	98	56.000	Gadus_morhua
ENSUMAG00000019894	VARS2	81	50.504	ENSGAFG00000004737	vars2	88	50.504	Gambusia_affinis
ENSUMAG00000019894	VARS2	87	55.059	ENSGACG00000001464	vars2	99	53.854	Gasterosteus_aculeatus
ENSUMAG00000019894	VARS2	91	62.373	ENSGAGG00000011652	VARS2	99	62.373	Gopherus_agassizii
ENSUMAG00000019894	VARS2	99	87.453	ENSGGOG00000014587	VARS2	99	87.453	Gorilla_gorilla
ENSUMAG00000019894	VARS2	90	52.236	ENSHBUG00000002448	vars2	94	52.236	Haplochromis_burtoni
ENSUMAG00000019894	VARS2	99	82.298	ENSHGLG00000012886	VARS2	96	82.298	Heterocephalus_glaber_female
ENSUMAG00000019894	VARS2	99	82.203	ENSHGLG00100016535	VARS2	99	82.203	Heterocephalus_glaber_male
ENSUMAG00000019894	VARS2	65	52.273	ENSHCOG00000017907	vars2	94	52.273	Hippocampus_comes
ENSUMAG00000019894	VARS2	91	54.481	ENSIPUG00000015573	Vars2	95	53.540	Ictalurus_punctatus
ENSUMAG00000019894	VARS2	99	86.874	ENSSTOG00000009924	VARS2	99	86.874	Ictidomys_tridecemlineatus
ENSUMAG00000019894	VARS2	99	82.498	ENSJJAG00000011144	Vars2	99	82.498	Jaculus_jaculus
ENSUMAG00000019894	VARS2	94	51.845	ENSKMAG00000001393	vars2	96	51.806	Kryptolebias_marmoratus
ENSUMAG00000019894	VARS2	52	64.144	ENSLBEG00000005480	-	81	64.130	Labrus_bergylta
ENSUMAG00000019894	VARS2	95	51.727	ENSLBEG00000011949	vars2	97	51.420	Labrus_bergylta
ENSUMAG00000019894	VARS2	95	53.495	ENSLACG00000001576	-	99	53.592	Latimeria_chalumnae
ENSUMAG00000019894	VARS2	99	85.769	ENSLAFG00000015183	VARS2	99	85.769	Loxodonta_africana
ENSUMAG00000019894	VARS2	99	87.264	ENSMFAG00000042367	VARS2	99	87.264	Macaca_fascicularis
ENSUMAG00000019894	VARS2	99	87.358	ENSMMUG00000018609	VARS2	99	87.358	Macaca_mulatta
ENSUMAG00000019894	VARS2	99	87.736	ENSMNEG00000043163	VARS2	99	87.736	Macaca_nemestrina
ENSUMAG00000019894	VARS2	99	87.925	ENSMLEG00000041728	VARS2	97	87.925	Mandrillus_leucophaeus
ENSUMAG00000019894	VARS2	96	51.147	ENSMAMG00000020339	vars2	98	50.752	Mastacembelus_armatus
ENSUMAG00000019894	VARS2	98	51.070	ENSMZEG00005017669	vars2	99	51.070	Maylandia_zebra
ENSUMAG00000019894	VARS2	100	82.879	ENSMAUG00000018946	Vars2	100	82.879	Mesocricetus_auratus
ENSUMAG00000019894	VARS2	84	88.004	ENSMICG00000005365	VARS2	100	88.004	Microcebus_murinus
ENSUMAG00000019894	VARS2	94	85.333	ENSMOCG00000014607	Vars2	100	85.333	Microtus_ochrogaster
ENSUMAG00000019894	VARS2	92	53.012	ENSMMOG00000012122	vars2	97	51.628	Mola_mola
ENSUMAG00000019894	VARS2	99	75.683	ENSMODG00000015848	VARS2	99	75.683	Monodelphis_domestica
ENSUMAG00000019894	VARS2	90	53.676	ENSMALG00000009217	vars2	95	54.603	Monopterus_albus
ENSUMAG00000019894	VARS2	100	82.768	MGP_CAROLIEiJ_G0021529	Vars2	100	82.768	Mus_caroli
ENSUMAG00000019894	VARS2	100	82.768	ENSMUSG00000038838	Vars2	100	82.768	Mus_musculus
ENSUMAG00000019894	VARS2	100	83.145	MGP_PahariEiJ_G0020523	Vars2	100	83.145	Mus_pahari
ENSUMAG00000019894	VARS2	100	82.863	MGP_SPRETEiJ_G0022436	Vars2	100	82.863	Mus_spretus
ENSUMAG00000019894	VARS2	100	92.467	ENSMPUG00000011643	VARS2	100	92.467	Mustela_putorius_furo
ENSUMAG00000019894	VARS2	99	85.220	ENSMLUG00000002356	VARS2	97	85.220	Myotis_lucifugus
ENSUMAG00000019894	VARS2	98	76.813	ENSNGAG00000020607	Vars2	100	76.266	Nannospalax_galili
ENSUMAG00000019894	VARS2	68	50.138	ENSNBRG00000001624	vars2	60	52.210	Neolamprologus_brichardi
ENSUMAG00000019894	VARS2	99	83.868	ENSNLEG00000005625	VARS2	97	83.868	Nomascus_leucogenys
ENSUMAG00000019894	VARS2	79	74.457	ENSMEUG00000014475	VARS2	89	74.457	Notamacropus_eugenii
ENSUMAG00000019894	VARS2	90	80.531	ENSOPRG00000000682	VARS2	90	80.531	Ochotona_princeps
ENSUMAG00000019894	VARS2	99	82.170	ENSODEG00000017965	VARS2	99	82.170	Octodon_degus
ENSUMAG00000019894	VARS2	92	38.031	ENSONIG00000004734	vars2	99	38.031	Oreochromis_niloticus
ENSUMAG00000019894	VARS2	82	61.910	ENSOANG00000000398	-	99	61.910	Ornithorhynchus_anatinus
ENSUMAG00000019894	VARS2	99	79.442	ENSOCUG00000021496	VARS2	64	79.442	Oryctolagus_cuniculus
ENSUMAG00000019894	VARS2	89	53.671	ENSORLG00000010632	vars2	93	52.362	Oryzias_latipes
ENSUMAG00000019894	VARS2	94	51.603	ENSORLG00020018584	vars2	97	50.706	Oryzias_latipes_hni
ENSUMAG00000019894	VARS2	94	51.506	ENSORLG00015010408	vars2	97	50.659	Oryzias_latipes_hsok
ENSUMAG00000019894	VARS2	92	52.329	ENSOMEG00000008360	vars2	97	50.801	Oryzias_melastigma
ENSUMAG00000019894	VARS2	99	86.723	ENSOGAG00000006087	VARS2	97	86.723	Otolemur_garnettii
ENSUMAG00000019894	VARS2	99	86.919	ENSOARG00000010844	VARS2	98	86.805	Ovis_aries
ENSUMAG00000019894	VARS2	99	87.547	ENSPPAG00000041141	VARS2	99	87.547	Pan_paniscus
ENSUMAG00000019894	VARS2	100	90.678	ENSPPRG00000006751	VARS2	97	90.678	Panthera_pardus
ENSUMAG00000019894	VARS2	100	90.584	ENSPTIG00000017799	VARS2	98	91.667	Panthera_tigris_altaica
ENSUMAG00000019894	VARS2	99	87.547	ENSPTRG00000034497	VARS2	99	87.547	Pan_troglodytes
ENSUMAG00000019894	VARS2	99	87.925	ENSPANG00000018481	VARS2	100	87.996	Papio_anubis
ENSUMAG00000019894	VARS2	95	54.305	ENSPKIG00000011372	vars2	96	54.010	Paramormyrops_kingsleyae
ENSUMAG00000019894	VARS2	59	69.414	ENSPSIG00000006206	VARS2	92	68.827	Pelodiscus_sinensis
ENSUMAG00000019894	VARS2	94	53.899	ENSPMGG00000000465	vars2	94	53.899	Periophthalmus_magnuspinnatus
ENSUMAG00000019894	VARS2	99	83.586	ENSPEMG00000014691	Vars2	99	83.586	Peromyscus_maniculatus_bairdii
ENSUMAG00000019894	VARS2	99	77.788	ENSPCIG00000015040	VARS2	99	77.788	Phascolarctos_cinereus
ENSUMAG00000019894	VARS2	93	51.866	ENSPFOG00000017616	vars2	97	51.086	Poecilia_formosa
ENSUMAG00000019894	VARS2	93	51.518	ENSPLAG00000019778	vars2	97	50.809	Poecilia_latipinna
ENSUMAG00000019894	VARS2	93	51.616	ENSPMEG00000011123	vars2	97	50.904	Poecilia_mexicana
ENSUMAG00000019894	VARS2	89	47.634	ENSPREG00000014998	vars2	95	46.535	Poecilia_reticulata
ENSUMAG00000019894	VARS2	99	87.736	ENSPPYG00000016424	VARS2	99	87.736	Pongo_abelii
ENSUMAG00000019894	VARS2	85	79.800	ENSPCAG00000006946	VARS2	84	80.240	Procavia_capensis
ENSUMAG00000019894	VARS2	99	86.077	ENSPCOG00000014839	VARS2	97	86.077	Propithecus_coquereli
ENSUMAG00000019894	VARS2	99	86.993	ENSPVAG00000004197	VARS2	99	86.993	Pteropus_vampyrus
ENSUMAG00000019894	VARS2	82	60.598	ENSPNYG00000010314	vars2	97	60.598	Pundamilia_nyererei
ENSUMAG00000019894	VARS2	94	53.876	ENSPNAG00000026793	vars2	94	53.876	Pygocentrus_nattereri
ENSUMAG00000019894	VARS2	100	83.051	ENSRNOG00000000833	Vars2	100	83.051	Rattus_norvegicus
ENSUMAG00000019894	VARS2	99	87.547	ENSRBIG00000032725	VARS2	99	87.547	Rhinopithecus_bieti
ENSUMAG00000019894	VARS2	99	87.547	ENSRROG00000043847	VARS2	99	87.547	Rhinopithecus_roxellana
ENSUMAG00000019894	VARS2	100	84.594	ENSSBOG00000033240	VARS2	97	85.055	Saimiri_boliviensis_boliviensis
ENSUMAG00000019894	VARS2	99	76.087	ENSSHAG00000009307	VARS2	100	76.087	Sarcophilus_harrisii
ENSUMAG00000019894	VARS2	96	52.964	ENSSFOG00015016187	vars2	98	52.381	Scleropages_formosus
ENSUMAG00000019894	VARS2	94	53.372	ENSSMAG00000020842	vars2	97	53.014	Scophthalmus_maximus
ENSUMAG00000019894	VARS2	94	52.077	ENSSDUG00000011598	vars2	97	51.564	Seriola_dumerili
ENSUMAG00000019894	VARS2	90	53.279	ENSSLDG00000015492	vars2	97	51.245	Seriola_lalandi_dorsalis
ENSUMAG00000019894	VARS2	57	89.781	ENSSARG00000003786	-	69	89.781	Sorex_araneus
ENSUMAG00000019894	VARS2	88	60.512	ENSSPUG00000014700	VARS2	94	60.512	Sphenodon_punctatus
ENSUMAG00000019894	VARS2	93	50.546	ENSSPAG00000004654	vars2	97	49.523	Stegastes_partitus
ENSUMAG00000019894	VARS2	100	88.230	ENSSSCG00000001384	VARS2	99	89.394	Sus_scrofa
ENSUMAG00000019894	VARS2	94	53.227	ENSTRUG00000005264	vars2	99	52.358	Takifugu_rubripes
ENSUMAG00000019894	VARS2	99	52.056	ENSTNIG00000005916	vars2	99	52.056	Tetraodon_nigroviridis
ENSUMAG00000019894	VARS2	52	95.522	ENSTBEG00000007976	-	53	95.522	Tupaia_belangeri
ENSUMAG00000019894	VARS2	100	75.706	ENSTTRG00000012243	VARS2	99	75.706	Tursiops_truncatus
ENSUMAG00000019894	VARS2	100	98.401	ENSUAMG00000026124	VARS2	100	99.132	Ursus_americanus
ENSUMAG00000019894	VARS2	100	90.772	ENSVVUG00000010754	VARS2	95	90.772	Vulpes_vulpes
ENSUMAG00000019894	VARS2	89	55.198	ENSXETG00000003036	vars2	99	55.198	Xenopus_tropicalis
ENSUMAG00000019894	VARS2	89	53.646	ENSXCOG00000003455	vars2	95	52.553	Xiphophorus_couchianus
ENSUMAG00000019894	VARS2	93	51.217	ENSXMAG00000013523	vars2	97	50.520	Xiphophorus_maculatus