EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000020087 (Gene tree)
Gene ID: 103668294
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 43615 bases
Position: chrKK498516.1:14785695-14829309
Accession: 103668294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000027678	zf-CCCH	PF00642.24	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000032729	RC3H1-201	4398	-	ENSUMAP00000027678	1133 (aa)	XP_008694728	UPI0004DFE17B

Gene Model

Click here to download ENSUMAG00000020087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000020087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000020087	RC3H1	92	54.330	ENSUMAG00000003161	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000020087	RC3H1	100	96.825	ENSG00000135870	RC3H1	100	96.825	Homo_sapiens
ENSUMAG00000020087	RC3H1	100	99.206	ENSAMEG00000015657	RC3H1	100	99.206	Ailuropoda_melanoleuca
ENSUMAG00000020087	RC3H1	100	88.307	ENSAPLG00000005341	RC3H1	100	87.773	Anas_platyrhynchos
ENSUMAG00000020087	RC3H1	100	85.328	ENSACAG00000015271	RC3H1	100	85.214	Anolis_carolinensis
ENSUMAG00000020087	RC3H1	100	97.090	ENSANAG00000036716	RC3H1	100	97.090	Aotus_nancymaae
ENSUMAG00000020087	RC3H1	100	95.414	ENSBTAG00000052708	RC3H1	100	95.414	Bos_taurus
ENSUMAG00000020087	RC3H1	100	96.914	ENSCJAG00000009106	RC3H1	100	96.914	Callithrix_jacchus
ENSUMAG00000020087	RC3H1	100	98.235	ENSCAFG00000014434	RC3H1	100	98.235	Canis_familiaris
ENSUMAG00000020087	RC3H1	100	98.148	ENSCAFG00020017112	RC3H1	100	98.148	Canis_lupus_dingo
ENSUMAG00000020087	RC3H1	100	95.852	ENSCHIG00000002873	RC3H1	100	95.852	Capra_hircus
ENSUMAG00000020087	RC3H1	99	95.146	ENSTSYG00000003913	RC3H1	99	95.146	Carlito_syrichta
ENSUMAG00000020087	RC3H1	100	91.182	ENSCPOG00000004349	RC3H1	100	91.182	Cavia_porcellus
ENSUMAG00000020087	RC3H1	100	94.709	ENSCCAG00000025652	RC3H1	98	97.033	Cebus_capucinus
ENSUMAG00000020087	RC3H1	100	97.090	ENSCATG00000033497	RC3H1	100	97.090	Cercocebus_atys
ENSUMAG00000020087	RC3H1	100	94.533	ENSCLAG00000011267	RC3H1	100	94.533	Chinchilla_lanigera
ENSUMAG00000020087	RC3H1	95	97.322	ENSCSAG00000011823	RC3H1	84	97.322	Chlorocebus_sabaeus
ENSUMAG00000020087	RC3H1	100	89.492	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSUMAG00000020087	RC3H1	100	97.178	ENSCANG00000032120	RC3H1	100	97.178	Colobus_angolensis_palliatus
ENSUMAG00000020087	RC3H1	100	94.351	ENSCGRG00001020812	Rc3h1	100	94.351	Cricetulus_griseus_chok1gshd
ENSUMAG00000020087	RC3H1	100	94.351	ENSCGRG00000011952	Rc3h1	100	94.351	Cricetulus_griseus_crigri
ENSUMAG00000020087	RC3H1	55	94.373	ENSDNOG00000011494	RC3H1	99	94.373	Dasypus_novemcinctus
ENSUMAG00000020087	RC3H1	100	95.234	ENSDORG00000004855	Rc3h1	100	95.234	Dipodomys_ordii
ENSUMAG00000020087	RC3H1	82	95.689	ENSETEG00000012064	RC3H1	87	95.689	Echinops_telfairi
ENSUMAG00000020087	RC3H1	100	95.587	ENSEASG00005017000	RC3H1	100	95.587	Equus_asinus_asinus
ENSUMAG00000020087	RC3H1	100	95.410	ENSECAG00000021208	RC3H1	100	95.410	Equus_caballus
ENSUMAG00000020087	RC3H1	89	83.302	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSUMAG00000020087	RC3H1	100	97.619	ENSFCAG00000014924	RC3H1	100	97.619	Felis_catus
ENSUMAG00000020087	RC3H1	100	87.325	ENSFALG00000002947	RC3H1	100	86.702	Ficedula_albicollis
ENSUMAG00000020087	RC3H1	100	94.621	ENSFDAG00000013303	RC3H1	100	94.621	Fukomys_damarensis
ENSUMAG00000020087	RC3H1	100	87.456	ENSGALG00000004587	RC3H1	100	86.918	Gallus_gallus
ENSUMAG00000020087	RC3H1	100	87.719	ENSGAGG00000018194	RC3H1	100	87.632	Gopherus_agassizii
ENSUMAG00000020087	RC3H1	100	90.158	ENSGGOG00000005735	RC3H1	100	90.158	Gorilla_gorilla
ENSUMAG00000020087	RC3H1	88	88.633	ENSHGLG00000004183	-	100	88.633	Heterocephalus_glaber_female
ENSUMAG00000020087	RC3H1	100	93.915	ENSHGLG00100008577	RC3H1	100	93.915	Heterocephalus_glaber_male
ENSUMAG00000020087	RC3H1	100	95.944	ENSSTOG00000016033	RC3H1	100	95.944	Ictidomys_tridecemlineatus
ENSUMAG00000020087	RC3H1	100	94.704	ENSJJAG00000018915	Rc3h1	100	94.881	Jaculus_jaculus
ENSUMAG00000020087	RC3H1	100	75.196	ENSLACG00000016186	RC3H1	100	78.174	Latimeria_chalumnae
ENSUMAG00000020087	RC3H1	97	96.903	ENSLAFG00000004367	RC3H1	100	96.903	Loxodonta_africana
ENSUMAG00000020087	RC3H1	100	96.914	ENSMFAG00000033725	RC3H1	100	96.914	Macaca_fascicularis
ENSUMAG00000020087	RC3H1	100	96.825	ENSMMUG00000000630	RC3H1	100	96.825	Macaca_mulatta
ENSUMAG00000020087	RC3H1	100	97.002	ENSMNEG00000035968	RC3H1	100	97.002	Macaca_nemestrina
ENSUMAG00000020087	RC3H1	100	96.914	ENSMLEG00000037455	RC3H1	100	96.914	Mandrillus_leucophaeus
ENSUMAG00000020087	RC3H1	97	94.456	ENSMAUG00000020864	Rc3h1	93	94.456	Mesocricetus_auratus
ENSUMAG00000020087	RC3H1	100	96.558	ENSMICG00000003000	RC3H1	100	96.558	Microcebus_murinus
ENSUMAG00000020087	RC3H1	93	93.182	ENSMOCG00000016587	Rc3h1	98	93.182	Microtus_ochrogaster
ENSUMAG00000020087	RC3H1	100	91.894	ENSMODG00000004289	RC3H1	100	91.982	Monodelphis_domestica
ENSUMAG00000020087	RC3H1	100	93.733	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.733	Mus_caroli
ENSUMAG00000020087	RC3H1	100	93.645	ENSMUSG00000040423	Rc3h1	100	93.645	Mus_musculus
ENSUMAG00000020087	RC3H1	100	93.469	MGP_PahariEiJ_G0027992	Rc3h1	100	93.469	Mus_pahari
ENSUMAG00000020087	RC3H1	100	93.469	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.469	Mus_spretus
ENSUMAG00000020087	RC3H1	100	98.060	ENSMPUG00000004747	RC3H1	100	98.060	Mustela_putorius_furo
ENSUMAG00000020087	RC3H1	100	95.146	ENSMLUG00000011127	RC3H1	100	95.146	Myotis_lucifugus
ENSUMAG00000020087	RC3H1	100	95.587	ENSNGAG00000011135	Rc3h1	100	95.587	Nannospalax_galili
ENSUMAG00000020087	RC3H1	100	96.737	ENSNLEG00000015327	RC3H1	100	96.737	Nomascus_leucogenys
ENSUMAG00000020087	RC3H1	99	82.493	ENSOPRG00000013068	RC3H1	99	82.493	Ochotona_princeps
ENSUMAG00000020087	RC3H1	100	94.004	ENSODEG00000014185	RC3H1	100	94.004	Octodon_degus
ENSUMAG00000020087	RC3H1	100	91.266	ENSOANG00000000924	RC3H1	100	91.354	Ornithorhynchus_anatinus
ENSUMAG00000020087	RC3H1	99	95.882	ENSOCUG00000004930	RC3H1	98	95.882	Oryctolagus_cuniculus
ENSUMAG00000020087	RC3H1	100	89.427	ENSOGAG00000004044	RC3H1	100	89.427	Otolemur_garnettii
ENSUMAG00000020087	RC3H1	100	96.140	ENSOARG00000013011	RC3H1	100	96.140	Ovis_aries
ENSUMAG00000020087	RC3H1	100	97.002	ENSPPAG00000039253	RC3H1	100	97.002	Pan_paniscus
ENSUMAG00000020087	RC3H1	100	97.087	ENSPPRG00000009007	RC3H1	100	97.087	Panthera_pardus
ENSUMAG00000020087	RC3H1	100	97.452	ENSPTIG00000015326	RC3H1	100	97.452	Panthera_tigris_altaica
ENSUMAG00000020087	RC3H1	100	97.002	ENSPTRG00000001702	RC3H1	100	97.002	Pan_troglodytes
ENSUMAG00000020087	RC3H1	100	96.914	ENSPANG00000008886	RC3H1	100	96.914	Papio_anubis
ENSUMAG00000020087	RC3H1	100	88.782	ENSPSIG00000016181	RC3H1	100	88.957	Pelodiscus_sinensis
ENSUMAG00000020087	RC3H1	100	93.998	ENSPEMG00000011966	Rc3h1	100	93.910	Peromyscus_maniculatus_bairdii
ENSUMAG00000020087	RC3H1	70	93.924	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSUMAG00000020087	RC3H1	100	93.474	ENSPPYG00000000490	RC3H1	98	96.172	Pongo_abelii
ENSUMAG00000020087	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSUMAG00000020087	RC3H1	83	96.047	ENSPCOG00000021795	RC3H1	96	96.047	Propithecus_coquereli
ENSUMAG00000020087	RC3H1	100	88.173	ENSPVAG00000007593	RC3H1	100	88.173	Pteropus_vampyrus
ENSUMAG00000020087	RC3H1	97	62.093	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSUMAG00000020087	RC3H1	100	97.090	ENSRBIG00000037743	RC3H1	100	97.090	Rhinopithecus_bieti
ENSUMAG00000020087	RC3H1	100	97.002	ENSRROG00000036546	RC3H1	100	97.002	Rhinopithecus_roxellana
ENSUMAG00000020087	RC3H1	93	87.595	ENSSBOG00000010664	RC3H1	100	90.814	Saimiri_boliviensis_boliviensis
ENSUMAG00000020087	RC3H1	100	91.101	ENSSHAG00000007589	RC3H1	100	91.189	Sarcophilus_harrisii
ENSUMAG00000020087	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSUMAG00000020087	RC3H1	100	84.063	ENSSPUG00000018472	RC3H1	100	84.224	Sphenodon_punctatus
ENSUMAG00000020087	RC3H1	100	96.911	ENSSSCG00000015498	RC3H1	100	96.911	Sus_scrofa
ENSUMAG00000020087	RC3H1	100	87.719	ENSTGUG00000004090	RC3H1	100	87.006	Taeniopygia_guttata
ENSUMAG00000020087	RC3H1	93	90.690	ENSTBEG00000005015	RC3H1	93	90.690	Tupaia_belangeri
ENSUMAG00000020087	RC3H1	100	96.039	ENSTTRG00000008572	RC3H1	100	96.039	Tursiops_truncatus
ENSUMAG00000020087	RC3H1	100	99.294	ENSUAMG00000019525	RC3H1	100	99.294	Ursus_americanus
ENSUMAG00000020087	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSUMAG00000020087	RC3H1	100	97.889	ENSVVUG00000014201	RC3H1	100	97.889	Vulpes_vulpes
ENSUMAG00000020087	RC3H1	100	78.454	ENSXETG00000020030	rc3h1	100	78.280	Xenopus_tropicalis