EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000020223 (Gene tree)
Gene ID: 103682510
Gene Symbol: RBM42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 7770 bases
Position: chrKK499608.1:635332-643101
Accession: 103682510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000027841	RRM_1	PF00076.22	7.2e-18	1	1
ENSUMAP00000027836	RRM_1	PF00076.22	7.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000032942	RBM42-202	1627	-	ENSUMAP00000027841	455 (aa)	-	-
ENSUMAT00000032936	RBM42-201	1693	XM_008712111	ENSUMAP00000027836	477 (aa)	XP_008710333	UPI0004E011E4

Gene Model

Click here to download ENSUMAG00000020223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000020223's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000020223	RBM42	100	97.917	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSUMAG00000020223	RBM42	100	99.374	ENSAMEG00000000524	RBM42	100	99.374	Ailuropoda_melanoleuca
ENSUMAG00000020223	RBM42	100	97.802	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSUMAG00000020223	RBM42	100	98.242	ENSBTAG00000013440	RBM42	100	98.242	Bos_taurus
ENSUMAG00000020223	RBM42	100	96.703	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSUMAG00000020223	RBM42	100	92.453	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSUMAG00000020223	RBM42	100	97.275	ENSCHIG00000009518	RBM42	100	97.275	Capra_hircus
ENSUMAG00000020223	RBM42	100	97.908	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSUMAG00000020223	RBM42	81	98.446	ENSCAPG00000009566	RBM42	99	98.446	Cavia_aperea
ENSUMAG00000020223	RBM42	100	97.904	ENSCPOG00000012365	RBM42	99	97.904	Cavia_porcellus
ENSUMAG00000020223	RBM42	100	98.323	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSUMAG00000020223	RBM42	100	97.708	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSUMAG00000020223	RBM42	100	97.275	ENSCLAG00000012865	RBM42	99	97.275	Chinchilla_lanigera
ENSUMAG00000020223	RBM42	100	96.070	ENSCSAG00000004422	RBM42	100	96.070	Chlorocebus_sabaeus
ENSUMAG00000020223	RBM42	100	87.841	ENSCANG00000030272	RBM42	100	87.841	Colobus_angolensis_palliatus
ENSUMAG00000020223	RBM42	100	97.275	ENSCGRG00001018540	Rbm42	99	97.275	Cricetulus_griseus_chok1gshd
ENSUMAG00000020223	RBM42	100	96.667	ENSDNOG00000037397	RBM42	100	96.667	Dasypus_novemcinctus
ENSUMAG00000020223	RBM42	100	97.065	ENSDORG00000013001	Rbm42	99	97.065	Dipodomys_ordii
ENSUMAG00000020223	RBM42	75	91.304	ENSETEG00000007878	RBM42	71	91.071	Echinops_telfairi
ENSUMAG00000020223	RBM42	100	96.923	ENSEASG00005001074	RBM42	100	96.923	Equus_asinus_asinus
ENSUMAG00000020223	RBM42	100	96.923	ENSECAG00000018215	RBM42	100	96.923	Equus_caballus
ENSUMAG00000020223	RBM42	100	99.161	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSUMAG00000020223	RBM42	100	96.451	ENSFDAG00000007440	RBM42	99	96.451	Fukomys_damarensis
ENSUMAG00000020223	RBM42	100	97.917	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSUMAG00000020223	RBM42	100	94.725	ENSHGLG00000008418	RBM42	99	95.597	Heterocephalus_glaber_female
ENSUMAG00000020223	RBM42	100	94.725	ENSHGLG00100018667	RBM42	99	95.597	Heterocephalus_glaber_male
ENSUMAG00000020223	RBM42	100	96.646	ENSSTOG00000013050	RBM42	100	96.646	Ictidomys_tridecemlineatus
ENSUMAG00000020223	RBM42	100	96.226	ENSJJAG00000010421	Rbm42	99	96.226	Jaculus_jaculus
ENSUMAG00000020223	RBM42	100	95.807	ENSLAFG00000014993	RBM42	99	95.807	Loxodonta_africana
ENSUMAG00000020223	RBM42	100	97.708	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSUMAG00000020223	RBM42	100	97.708	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSUMAG00000020223	RBM42	100	97.708	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSUMAG00000020223	RBM42	100	97.708	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSUMAG00000020223	RBM42	100	98.532	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSUMAG00000020223	RBM42	100	97.065	ENSMOCG00000000405	Rbm42	99	97.065	Microtus_ochrogaster
ENSUMAG00000020223	RBM42	100	97.065	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.065	Mus_caroli
ENSUMAG00000020223	RBM42	100	97.065	ENSMUSG00000036733	Rbm42	99	97.065	Mus_musculus
ENSUMAG00000020223	RBM42	100	97.065	MGP_PahariEiJ_G0012770	Rbm42	99	97.065	Mus_pahari
ENSUMAG00000020223	RBM42	100	97.065	MGP_SPRETEiJ_G0030632	Rbm42	99	97.065	Mus_spretus
ENSUMAG00000020223	RBM42	100	97.802	ENSMPUG00000006288	RBM42	100	97.802	Mustela_putorius_furo
ENSUMAG00000020223	RBM42	100	97.275	ENSMLUG00000011334	RBM42	100	97.275	Myotis_lucifugus
ENSUMAG00000020223	RBM42	100	97.065	ENSNGAG00000019698	Rbm42	99	97.065	Nannospalax_galili
ENSUMAG00000020223	RBM42	70	98.204	ENSNLEG00000011272	-	94	91.341	Nomascus_leucogenys
ENSUMAG00000020223	RBM42	96	82.251	ENSMEUG00000016300	RBM42	100	81.930	Notamacropus_eugenii
ENSUMAG00000020223	RBM42	100	94.130	ENSOPRG00000001229	RBM42	100	92.243	Ochotona_princeps
ENSUMAG00000020223	RBM42	100	97.484	ENSODEG00000013705	RBM42	99	97.484	Octodon_degus
ENSUMAG00000020223	RBM42	100	95.633	ENSOCUG00000003337	RBM42	100	95.633	Oryctolagus_cuniculus
ENSUMAG00000020223	RBM42	100	97.275	ENSOGAG00000004144	RBM42	100	97.275	Otolemur_garnettii
ENSUMAG00000020223	RBM42	98	89.507	ENSOARG00000004926	RBM42	98	92.857	Ovis_aries
ENSUMAG00000020223	RBM42	100	98.113	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSUMAG00000020223	RBM42	100	99.161	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSUMAG00000020223	RBM42	100	98.742	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSUMAG00000020223	RBM42	100	97.917	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSUMAG00000020223	RBM42	100	97.598	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSUMAG00000020223	RBM42	100	97.694	ENSPEMG00000012065	Rbm42	99	97.694	Peromyscus_maniculatus_bairdii
ENSUMAG00000020223	RBM42	100	96.907	ENSPPYG00000009871	RBM42	100	96.907	Pongo_abelii
ENSUMAG00000020223	RBM42	100	84.486	ENSPCAG00000013053	RBM42	100	82.809	Procavia_capensis
ENSUMAG00000020223	RBM42	70	99.099	ENSPCOG00000020672	RBM42	81	99.099	Propithecus_coquereli
ENSUMAG00000020223	RBM42	100	98.952	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSUMAG00000020223	RBM42	100	98.323	ENSPVAG00000012815	RBM42	100	98.323	Pteropus_vampyrus
ENSUMAG00000020223	RBM42	100	97.275	ENSRNOG00000024278	Rbm42	99	97.275	Rattus_norvegicus
ENSUMAG00000020223	RBM42	100	97.708	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSUMAG00000020223	RBM42	100	98.113	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSUMAG00000020223	RBM42	85	98.768	ENSSBOG00000030666	RBM42	100	98.768	Saimiri_boliviensis_boliviensis
ENSUMAG00000020223	RBM42	100	87.292	ENSSARG00000010724	RBM42	100	87.292	Sorex_araneus
ENSUMAG00000020223	RBM42	100	97.694	ENSSSCG00000002905	RBM42	100	97.694	Sus_scrofa
ENSUMAG00000020223	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	100.000	Ursus_americanus
ENSUMAG00000020223	RBM42	100	97.275	ENSVVUG00000015117	RBM42	100	97.275	Vulpes_vulpes