EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000021038 (Gene tree)
Gene ID: 103671328
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 27505 bases
Position: chrKK498653.1:22629168-22656672
Accession: 9758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000028982	MMR_HSR1	PF01926.23	1.6e-05	1	1
ENSUMAP00000028980	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000034265	RAB1A-202	1188	-	ENSUMAP00000028982	200 (aa)	-	-
ENSUMAT00000034263	RAB1A-201	1384	-	ENSUMAP00000028980	211 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000021038's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000021038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000021038	RAB1A	97	42.424	ENSUMAG00000011821	RAB33A	84	42.424
ENSUMAG00000021038	RAB1A	65	53.077	ENSUMAG00000014594	RAB11B	64	53.077
ENSUMAG00000021038	RAB1A	78	39.623	ENSUMAG00000019370	-	79	39.623
ENSUMAG00000021038	RAB1A	97	43.814	ENSUMAG00000018295	RAB5A	90	43.814
ENSUMAG00000021038	RAB1A	97	43.299	ENSUMAG00000016263	RAB5B	90	43.299
ENSUMAG00000021038	RAB1A	97	43.077	ENSUMAG00000023270	RAB5C	89	43.077
ENSUMAG00000021038	RAB1A	80	38.650	ENSUMAG00000000492	RAB36	55	38.650
ENSUMAG00000021038	RAB1A	56	33.043	ENSUMAG00000007990	-	57	33.043
ENSUMAG00000021038	RAB1A	97	35.354	ENSUMAG00000010248	RAB6A	94	35.354
ENSUMAG00000021038	RAB1A	91	47.253	ENSUMAG00000015574	-	93	45.876
ENSUMAG00000021038	RAB1A	82	37.805	ENSUMAG00000003274	KRAS	95	35.912
ENSUMAG00000021038	RAB1A	78	39.623	ENSUMAG00000001213	RAB9B	83	37.952
ENSUMAG00000021038	RAB1A	77	36.774	ENSUMAG00000017116	-	67	36.774
ENSUMAG00000021038	RAB1A	58	36.134	ENSUMAG00000011131	ARL14	62	36.134
ENSUMAG00000021038	RAB1A	83	35.928	ENSUMAG00000014965	MRAS	74	34.946
ENSUMAG00000021038	RAB1A	82	38.415	ENSUMAG00000011722	NRAS	86	38.415
ENSUMAG00000021038	RAB1A	86	35.028	ENSUMAG00000005506	-	93	35.028
ENSUMAG00000021038	RAB1A	82	44.643	ENSUMAG00000014975	RAB33B	75	44.643
ENSUMAG00000021038	RAB1A	80	39.264	ENSUMAG00000015081	RAB7A	88	39.264
ENSUMAG00000021038	RAB1A	78	40.252	ENSUMAG00000005348	-	79	40.252
ENSUMAG00000021038	RAB1A	59	32.203	ENSUMAG00000019574	ARL8B	62	31.667
ENSUMAG00000021038	RAB1A	83	34.545	ENSUMAG00000018629	RAB23	69	34.545
ENSUMAG00000021038	RAB1A	90	33.514	ENSUMAG00000002671	RERG	90	33.514
ENSUMAG00000021038	RAB1A	85	44.767	ENSUMAG00000017386	RAB39B	81	44.767
ENSUMAG00000021038	RAB1A	97	45.596	ENSUMAG00000003596	RAB14	89	45.596
ENSUMAG00000021038	RAB1A	99	46.829	ENSUMAG00000012273	RAB11A	95	46.829
ENSUMAG00000021038	RAB1A	82	50.610	ENSUMAG00000023572	RAB30	81	50.610
ENSUMAG00000021038	RAB1A	66	31.655	ENSUMAG00000012795	ARL4D	68	31.655
ENSUMAG00000021038	RAB1A	99	92.893	ENSUMAG00000011180	RAB1B	89	92.462
ENSUMAG00000021038	RAB1A	80	30.303	ENSUMAG00000022558	DNAJC27	60	30.303
ENSUMAG00000021038	RAB1A	92	48.634	ENSUMAG00000004940	RAB2B	85	48.634
ENSUMAG00000021038	RAB1A	82	46.341	ENSUMAG00000018376	RAB25	77	46.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000021038	RAB1A	99	100.000	ENSG00000138069	RAB1A	96	100.000	Homo_sapiens
ENSUMAG00000021038	RAB1A	99	95.431	ENSAPOG00000008143	-	98	95.431	Acanthochromis_polyacanthus
ENSUMAG00000021038	RAB1A	99	100.000	ENSAMEG00000001127	RAB1A	98	100.000	Ailuropoda_melanoleuca
ENSUMAG00000021038	RAB1A	99	95.431	ENSAOCG00000020606	-	99	95.431	Amphiprion_ocellaris
ENSUMAG00000021038	RAB1A	99	95.431	ENSAPEG00000022488	-	98	95.431	Amphiprion_percula
ENSUMAG00000021038	RAB1A	99	100.000	ENSANAG00000020929	RAB1A	96	100.000	Aotus_nancymaae
ENSUMAG00000021038	RAB1A	99	95.939	ENSACLG00000003326	-	98	95.939	Astatotilapia_calliptera
ENSUMAG00000021038	RAB1A	99	94.416	ENSAMXG00000034850	-	98	94.416	Astyanax_mexicanus
ENSUMAG00000021038	RAB1A	99	100.000	ENSBTAG00000016720	RAB1A	99	100.000	Bos_taurus
ENSUMAG00000021038	RAB1A	99	100.000	ENSCJAG00000046275	RAB1A	99	100.000	Callithrix_jacchus
ENSUMAG00000021038	RAB1A	99	100.000	ENSCAFG00000003187	RAB1A	96	100.000	Canis_familiaris
ENSUMAG00000021038	RAB1A	99	100.000	ENSCAFG00020026971	RAB1A	96	100.000	Canis_lupus_dingo
ENSUMAG00000021038	RAB1A	99	100.000	ENSCHIG00000014060	RAB1A	97	100.000	Capra_hircus
ENSUMAG00000021038	RAB1A	99	100.000	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSUMAG00000021038	RAB1A	99	100.000	ENSCPOG00000015437	RAB1A	96	100.000	Cavia_porcellus
ENSUMAG00000021038	RAB1A	99	100.000	ENSCCAG00000021869	RAB1A	97	100.000	Cebus_capucinus
ENSUMAG00000021038	RAB1A	99	100.000	ENSCATG00000030853	RAB1A	97	100.000	Cercocebus_atys
ENSUMAG00000021038	RAB1A	99	100.000	ENSCLAG00000014766	RAB1A	96	100.000	Chinchilla_lanigera
ENSUMAG00000021038	RAB1A	99	99.492	ENSCPBG00000013243	RAB1A	96	99.492	Chrysemys_picta_bellii
ENSUMAG00000021038	RAB1A	99	97.475	ENSCANG00000035916	RAB1A	99	97.462	Colobus_angolensis_palliatus
ENSUMAG00000021038	RAB1A	100	99.000	ENSCGRG00001012691	-	99	98.507	Cricetulus_griseus_chok1gshd
ENSUMAG00000021038	RAB1A	100	99.000	ENSCGRG00000008456	-	99	98.507	Cricetulus_griseus_crigri
ENSUMAG00000021038	RAB1A	99	100.000	ENSDNOG00000018236	RAB1A	96	100.000	Dasypus_novemcinctus
ENSUMAG00000021038	RAB1A	99	100.000	ENSDORG00000028628	-	96	100.000	Dipodomys_ordii
ENSUMAG00000021038	RAB1A	99	84.343	FBgn0285937	Rab1	96	84.343	Drosophila_melanogaster
ENSUMAG00000021038	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	98	100.000	Echinops_telfairi
ENSUMAG00000021038	RAB1A	99	100.000	ENSEASG00005007298	RAB1A	96	100.000	Equus_asinus_asinus
ENSUMAG00000021038	RAB1A	99	100.000	ENSECAG00000009926	RAB1A	96	100.000	Equus_caballus
ENSUMAG00000021038	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	98	100.000	Erinaceus_europaeus
ENSUMAG00000021038	RAB1A	99	95.477	ENSELUG00000012166	RAB1A	93	95.477	Esox_lucius
ENSUMAG00000021038	RAB1A	99	100.000	ENSFCAG00000002536	RAB1A	96	100.000	Felis_catus
ENSUMAG00000021038	RAB1A	99	99.495	ENSFALG00000013624	RAB1A	97	99.495	Ficedula_albicollis
ENSUMAG00000021038	RAB1A	99	100.000	ENSFDAG00000019505	-	96	100.000	Fukomys_damarensis
ENSUMAG00000021038	RAB1A	99	94.416	ENSFHEG00000014414	-	98	94.416	Fundulus_heteroclitus
ENSUMAG00000021038	RAB1A	99	99.495	ENSGALG00000031582	RAB1A	96	99.492	Gallus_gallus
ENSUMAG00000021038	RAB1A	99	94.416	ENSGAFG00000000918	-	98	94.416	Gambusia_affinis
ENSUMAG00000021038	RAB1A	99	99.492	ENSGAGG00000006802	RAB1A	96	99.492	Gopherus_agassizii
ENSUMAG00000021038	RAB1A	99	100.000	ENSGGOG00000026603	RAB1A	99	100.000	Gorilla_gorilla
ENSUMAG00000021038	RAB1A	99	100.000	ENSHGLG00000013585	RAB1A	100	97.549	Heterocephalus_glaber_female
ENSUMAG00000021038	RAB1A	99	100.000	ENSHGLG00100007994	RAB1A	100	97.549	Heterocephalus_glaber_male
ENSUMAG00000021038	RAB1A	100	99.000	ENSSTOG00000020693	-	99	99.000	Ictidomys_tridecemlineatus
ENSUMAG00000021038	RAB1A	99	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSUMAG00000021038	RAB1A	99	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSUMAG00000021038	RAB1A	99	94.924	ENSLBEG00000028426	RAB1A	98	94.924	Labrus_bergylta
ENSUMAG00000021038	RAB1A	99	98.985	ENSLACG00000012869	RAB1A	96	98.985	Latimeria_chalumnae
ENSUMAG00000021038	RAB1A	99	100.000	ENSLAFG00000016666	RAB1A	97	99.497	Loxodonta_africana
ENSUMAG00000021038	RAB1A	99	100.000	ENSMFAG00000046246	RAB1A	96	100.000	Macaca_fascicularis
ENSUMAG00000021038	RAB1A	99	100.000	ENSMMUG00000021721	RAB1A	97	95.305	Macaca_mulatta
ENSUMAG00000021038	RAB1A	93	99.462	ENSMNEG00000028414	-	93	99.462	Macaca_nemestrina
ENSUMAG00000021038	RAB1A	99	100.000	ENSMLEG00000042535	RAB1A	97	100.000	Mandrillus_leucophaeus
ENSUMAG00000021038	RAB1A	99	95.939	ENSMZEG00005013959	-	98	95.939	Maylandia_zebra
ENSUMAG00000021038	RAB1A	100	99.000	ENSMGAG00000004611	RAB1A	99	99.497	Meleagris_gallopavo
ENSUMAG00000021038	RAB1A	100	98.500	ENSMAUG00000012156	Rab1a	98	98.500	Mesocricetus_auratus
ENSUMAG00000021038	RAB1A	99	100.000	ENSMICG00000012587	RAB1A	96	100.000	Microcebus_murinus
ENSUMAG00000021038	RAB1A	99	99.492	ENSMOCG00000017022	Rab1a	99	98.500	Microtus_ochrogaster
ENSUMAG00000021038	RAB1A	99	93.401	ENSMMOG00000018709	RAB1A	97	93.401	Mola_mola
ENSUMAG00000021038	RAB1A	99	99.492	ENSMODG00000003340	RAB1A	96	99.492	Monodelphis_domestica
ENSUMAG00000021038	RAB1A	99	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	96	100.000	Mus_caroli
ENSUMAG00000021038	RAB1A	99	100.000	ENSMUSG00000020149	Rab1a	98	100.000	Mus_musculus
ENSUMAG00000021038	RAB1A	99	100.000	MGP_PahariEiJ_G0016776	Rab1a	96	100.000	Mus_pahari
ENSUMAG00000021038	RAB1A	99	100.000	MGP_SPRETEiJ_G0016958	Rab1a	98	100.000	Mus_spretus
ENSUMAG00000021038	RAB1A	99	100.000	ENSMPUG00000006139	RAB1A	78	100.000	Mustela_putorius_furo
ENSUMAG00000021038	RAB1A	99	100.000	ENSMLUG00000009489	RAB1A	96	100.000	Myotis_lucifugus
ENSUMAG00000021038	RAB1A	99	100.000	ENSNGAG00000005838	Rab1a	96	100.000	Nannospalax_galili
ENSUMAG00000021038	RAB1A	99	95.939	ENSNBRG00000020492	-	98	95.939	Neolamprologus_brichardi
ENSUMAG00000021038	RAB1A	99	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSUMAG00000021038	RAB1A	96	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSUMAG00000021038	RAB1A	99	93.909	ENSONIG00000006819	-	97	93.909	Oreochromis_niloticus
ENSUMAG00000021038	RAB1A	99	99.492	ENSOANG00000012438	RAB1A	96	99.492	Ornithorhynchus_anatinus
ENSUMAG00000021038	RAB1A	99	100.000	ENSOCUG00000017003	RAB1A	96	100.000	Oryctolagus_cuniculus
ENSUMAG00000021038	RAB1A	99	100.000	ENSOGAG00000026181	RAB1A	96	100.000	Otolemur_garnettii
ENSUMAG00000021038	RAB1A	99	100.000	ENSOARG00000019997	RAB1A	100	98.058	Ovis_aries
ENSUMAG00000021038	RAB1A	99	100.000	ENSPPAG00000030253	RAB1A	99	99.497	Pan_paniscus
ENSUMAG00000021038	RAB1A	99	100.000	ENSPPRG00000025077	RAB1A	96	100.000	Panthera_pardus
ENSUMAG00000021038	RAB1A	99	100.000	ENSPTIG00000013471	RAB1A	98	100.000	Panthera_tigris_altaica
ENSUMAG00000021038	RAB1A	99	100.000	ENSPTRG00000011989	RAB1A	99	99.497	Pan_troglodytes
ENSUMAG00000021038	RAB1A	99	100.000	ENSPANG00000010485	RAB1A	97	100.000	Papio_anubis
ENSUMAG00000021038	RAB1A	99	99.495	ENSPSIG00000008028	RAB1A	97	99.495	Pelodiscus_sinensis
ENSUMAG00000021038	RAB1A	99	95.939	ENSPMGG00000021015	-	96	95.939	Periophthalmus_magnuspinnatus
ENSUMAG00000021038	RAB1A	99	100.000	ENSPEMG00000009340	Rab1a	99	99.005	Peromyscus_maniculatus_bairdii
ENSUMAG00000021038	RAB1A	99	99.492	ENSPCIG00000023212	RAB1A	96	99.492	Phascolarctos_cinereus
ENSUMAG00000021038	RAB1A	99	93.909	ENSPFOG00000000498	-	95	93.909	Poecilia_formosa
ENSUMAG00000021038	RAB1A	99	93.909	ENSPLAG00000015592	-	98	93.909	Poecilia_latipinna
ENSUMAG00000021038	RAB1A	99	93.909	ENSPMEG00000005288	-	98	93.909	Poecilia_mexicana
ENSUMAG00000021038	RAB1A	99	100.000	ENSPPYG00000012360	RAB1A	97	99.495	Pongo_abelii
ENSUMAG00000021038	RAB1A	99	100.000	ENSPCOG00000017244	RAB1A	98	98.500	Propithecus_coquereli
ENSUMAG00000021038	RAB1A	99	95.939	ENSPNYG00000015841	-	98	95.939	Pundamilia_nyererei
ENSUMAG00000021038	RAB1A	99	100.000	ENSRNOG00000004992	Rab1a	96	100.000	Rattus_norvegicus
ENSUMAG00000021038	RAB1A	99	100.000	ENSSBOG00000023732	RAB1A	96	100.000	Saimiri_boliviensis_boliviensis
ENSUMAG00000021038	RAB1A	99	99.495	ENSSHAG00000003597	RAB1A	96	98.990	Sarcophilus_harrisii
ENSUMAG00000021038	RAB1A	99	95.431	ENSSMAG00000021049	-	98	95.431	Scophthalmus_maximus
ENSUMAG00000021038	RAB1A	99	95.939	ENSSDUG00000022535	RAB1A	98	95.939	Seriola_dumerili
ENSUMAG00000021038	RAB1A	99	99.492	ENSSPUG00000012822	RAB1A	96	99.492	Sphenodon_punctatus
ENSUMAG00000021038	RAB1A	99	95.431	ENSSPAG00000012564	-	98	95.431	Stegastes_partitus
ENSUMAG00000021038	RAB1A	99	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSUMAG00000021038	RAB1A	99	99.492	ENSTGUG00000002328	RAB1A	99	97.059	Taeniopygia_guttata
ENSUMAG00000021038	RAB1A	99	94.924	ENSTRUG00000024994	RAB1A	98	94.924	Takifugu_rubripes
ENSUMAG00000021038	RAB1A	99	100.000	ENSVPAG00000005640	RAB1A	98	100.000	Vicugna_pacos
ENSUMAG00000021038	RAB1A	99	100.000	ENSVVUG00000027588	RAB1A	96	100.000	Vulpes_vulpes
ENSUMAG00000021038	RAB1A	99	94.416	ENSXMAG00000015776	-	98	94.416	Xiphophorus_maculatus