EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000021174 (Gene tree)
Gene ID: 103668460
Gene Symbol: RPUSD1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 2505 bases
Position: chrKK498627.1:3275573-3278077
Accession: 103668460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000029179	PseudoU_synth_2	PF00849.22	2.4e-25	1	1
ENSUMAP00000029177	PseudoU_synth_2	PF00849.22	3.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000034491	RPUSD1-201	1721	XM_008696711	ENSUMAP00000029177	302 (aa)	XP_008694933	UPI0004E02016
ENSUMAT00000034494	RPUSD1-202	985	-	ENSUMAP00000029179	277 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000021174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000021174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000021174	RPUSD1	100	80.128	ENSG00000007376	RPUSD1	100	85.119	Homo_sapiens
ENSUMAG00000021174	RPUSD1	98	58.940	ENSAPOG00000022221	rpusd1	98	58.940	Acanthochromis_polyacanthus
ENSUMAG00000021174	RPUSD1	100	97.020	ENSAMEG00000007461	RPUSD1	100	97.020	Ailuropoda_melanoleuca
ENSUMAG00000021174	RPUSD1	91	64.822	ENSACIG00000015863	rpusd1	98	57.190	Amphilophus_citrinellus
ENSUMAG00000021174	RPUSD1	91	64.427	ENSAOCG00000021975	rpusd1	95	56.721	Amphiprion_ocellaris
ENSUMAG00000021174	RPUSD1	91	64.822	ENSAPEG00000001316	rpusd1	95	57.049	Amphiprion_percula
ENSUMAG00000021174	RPUSD1	91	64.427	ENSATEG00000002984	rpusd1	98	57.377	Anabas_testudineus
ENSUMAG00000021174	RPUSD1	78	61.728	ENSAPLG00000012316	RPUSD1	99	61.728	Anas_platyrhynchos
ENSUMAG00000021174	RPUSD1	97	71.481	ENSACAG00000008953	RPUSD1	100	68.543	Anolis_carolinensis
ENSUMAG00000021174	RPUSD1	100	81.090	ENSANAG00000024709	RPUSD1	100	80.449	Aotus_nancymaae
ENSUMAG00000021174	RPUSD1	91	65.217	ENSACLG00000013692	rpusd1	98	58.306	Astatotilapia_calliptera
ENSUMAG00000021174	RPUSD1	99	60.870	ENSAMXG00000019802	rpusd1	100	60.870	Astyanax_mexicanus
ENSUMAG00000021174	RPUSD1	100	86.039	ENSBTAG00000000179	RPUSD1	100	85.714	Bos_taurus
ENSUMAG00000021174	RPUSD1	100	80.449	ENSCJAG00000012253	RPUSD1	100	80.449	Callithrix_jacchus
ENSUMAG00000021174	RPUSD1	100	95.364	ENSCAFG00000019614	RPUSD1	100	95.364	Canis_familiaris
ENSUMAG00000021174	RPUSD1	100	95.364	ENSCAFG00020008891	RPUSD1	100	95.364	Canis_lupus_dingo
ENSUMAG00000021174	RPUSD1	100	85.714	ENSCHIG00000012872	RPUSD1	100	85.390	Capra_hircus
ENSUMAG00000021174	RPUSD1	100	81.788	ENSTSYG00000036934	RPUSD1	100	81.788	Carlito_syrichta
ENSUMAG00000021174	RPUSD1	100	83.660	ENSCAPG00000014219	RPUSD1	100	83.333	Cavia_aperea
ENSUMAG00000021174	RPUSD1	100	83.660	ENSCPOG00000034604	RPUSD1	100	83.333	Cavia_porcellus
ENSUMAG00000021174	RPUSD1	100	81.731	ENSCCAG00000034385	RPUSD1	100	80.769	Cebus_capucinus
ENSUMAG00000021174	RPUSD1	100	80.769	ENSCATG00000042983	RPUSD1	100	81.731	Cercocebus_atys
ENSUMAG00000021174	RPUSD1	100	82.353	ENSCLAG00000013966	RPUSD1	100	81.699	Chinchilla_lanigera
ENSUMAG00000021174	RPUSD1	100	80.769	ENSCSAG00000012121	RPUSD1	100	80.769	Chlorocebus_sabaeus
ENSUMAG00000021174	RPUSD1	99	66.230	ENSCPBG00000021101	RPUSD1	99	65.902	Chrysemys_picta_bellii
ENSUMAG00000021174	RPUSD1	99	81.227	ENSCANG00000028576	RPUSD1	96	84.387	Colobus_angolensis_palliatus
ENSUMAG00000021174	RPUSD1	100	82.566	ENSCGRG00001014253	Rpusd1	100	81.848	Cricetulus_griseus_chok1gshd
ENSUMAG00000021174	RPUSD1	100	82.566	ENSCGRG00000017995	Rpusd1	100	81.848	Cricetulus_griseus_crigri
ENSUMAG00000021174	RPUSD1	99	56.954	ENSCSEG00000018512	rpusd1	100	57.191	Cynoglossus_semilaevis
ENSUMAG00000021174	RPUSD1	98	59.000	ENSCVAG00000022746	rpusd1	98	58.667	Cyprinodon_variegatus
ENSUMAG00000021174	RPUSD1	99	62.667	ENSDARG00000060192	rpusd1	100	60.912	Danio_rerio
ENSUMAG00000021174	RPUSD1	100	82.143	ENSDNOG00000003721	RPUSD1	100	82.143	Dasypus_novemcinctus
ENSUMAG00000021174	RPUSD1	100	84.818	ENSDORG00000026656	Rpusd1	100	86.469	Dipodomys_ordii
ENSUMAG00000021174	RPUSD1	97	46.278	ENSEBUG00000008767	rpusd1	93	46.278	Eptatretus_burgeri
ENSUMAG00000021174	RPUSD1	100	82.911	ENSEASG00005018421	RPUSD1	76	82.911	Equus_asinus_asinus
ENSUMAG00000021174	RPUSD1	92	59.843	ENSELUG00000014307	rpusd1	88	53.055	Esox_lucius
ENSUMAG00000021174	RPUSD1	100	92.384	ENSFCAG00000010359	RPUSD1	100	92.384	Felis_catus
ENSUMAG00000021174	RPUSD1	99	67.550	ENSFALG00000003211	RPUSD1	100	66.887	Ficedula_albicollis
ENSUMAG00000021174	RPUSD1	100	83.007	ENSFDAG00000013398	RPUSD1	100	82.680	Fukomys_damarensis
ENSUMAG00000021174	RPUSD1	98	58.086	ENSFHEG00000004736	rpusd1	98	56.436	Fundulus_heteroclitus
ENSUMAG00000021174	RPUSD1	91	62.451	ENSGMOG00000010756	rpusd1	98	55.592	Gadus_morhua
ENSUMAG00000021174	RPUSD1	99	66.883	ENSGALG00000005315	RPUSD1	100	67.541	Gallus_gallus
ENSUMAG00000021174	RPUSD1	98	58.940	ENSGAFG00000009886	rpusd1	98	58.333	Gambusia_affinis
ENSUMAG00000021174	RPUSD1	90	63.855	ENSGACG00000014276	rpusd1	97	56.250	Gasterosteus_aculeatus
ENSUMAG00000021174	RPUSD1	92	72.835	ENSGAGG00000004181	RPUSD1	99	65.574	Gopherus_agassizii
ENSUMAG00000021174	RPUSD1	100	79.808	ENSGGOG00000013997	RPUSD1	100	80.449	Gorilla_gorilla
ENSUMAG00000021174	RPUSD1	91	64.822	ENSHBUG00000023728	rpusd1	98	57.980	Haplochromis_burtoni
ENSUMAG00000021174	RPUSD1	100	83.007	ENSHGLG00000002595	RPUSD1	100	83.007	Heterocephalus_glaber_female
ENSUMAG00000021174	RPUSD1	100	83.007	ENSHGLG00100014303	RPUSD1	100	83.007	Heterocephalus_glaber_male
ENSUMAG00000021174	RPUSD1	96	61.887	ENSHCOG00000002390	rpusd1	99	57.239	Hippocampus_comes
ENSUMAG00000021174	RPUSD1	99	60.396	ENSIPUG00000001570	rpusd1	99	60.396	Ictalurus_punctatus
ENSUMAG00000021174	RPUSD1	100	83.660	ENSSTOG00000004276	RPUSD1	100	83.007	Ictidomys_tridecemlineatus
ENSUMAG00000021174	RPUSD1	100	83.660	ENSJJAG00000015696	Rpusd1	100	83.333	Jaculus_jaculus
ENSUMAG00000021174	RPUSD1	94	62.934	ENSKMAG00000017287	rpusd1	98	57.333	Kryptolebias_marmoratus
ENSUMAG00000021174	RPUSD1	91	63.241	ENSLBEG00000013354	RPUSD1	98	55.410	Labrus_bergylta
ENSUMAG00000021174	RPUSD1	91	63.241	ENSLBEG00000022502	rpusd1	98	55.410	Labrus_bergylta
ENSUMAG00000021174	RPUSD1	99	62.583	ENSLACG00000008869	RPUSD1	99	62.171	Latimeria_chalumnae
ENSUMAG00000021174	RPUSD1	78	73.148	ENSLOCG00000005682	rpusd1	99	73.148	Lepisosteus_oculatus
ENSUMAG00000021174	RPUSD1	100	83.775	ENSLAFG00000002115	RPUSD1	100	83.775	Loxodonta_africana
ENSUMAG00000021174	RPUSD1	100	81.090	ENSMFAG00000003961	RPUSD1	100	81.731	Macaca_fascicularis
ENSUMAG00000021174	RPUSD1	100	81.090	ENSMMUG00000000842	RPUSD1	100	81.731	Macaca_mulatta
ENSUMAG00000021174	RPUSD1	100	81.090	ENSMNEG00000042712	RPUSD1	100	81.731	Macaca_nemestrina
ENSUMAG00000021174	RPUSD1	100	81.090	ENSMLEG00000030591	RPUSD1	100	81.731	Mandrillus_leucophaeus
ENSUMAG00000021174	RPUSD1	91	65.217	ENSMAMG00000004735	rpusd1	98	58.170	Mastacembelus_armatus
ENSUMAG00000021174	RPUSD1	91	65.217	ENSMZEG00005003214	rpusd1	98	58.306	Maylandia_zebra
ENSUMAG00000021174	RPUSD1	97	66.445	ENSMGAG00000005447	RPUSD1	99	66.113	Meleagris_gallopavo
ENSUMAG00000021174	RPUSD1	92	79.457	ENSMAUG00000019998	Rpusd1	100	78.571	Mesocricetus_auratus
ENSUMAG00000021174	RPUSD1	100	82.736	ENSMICG00000017561	RPUSD1	100	83.388	Microcebus_murinus
ENSUMAG00000021174	RPUSD1	100	84.641	ENSMOCG00000014082	Rpusd1	100	84.314	Microtus_ochrogaster
ENSUMAG00000021174	RPUSD1	94	61.686	ENSMMOG00000012569	rpusd1	99	57.770	Mola_mola
ENSUMAG00000021174	RPUSD1	100	70.874	ENSMODG00000016882	RPUSD1	100	71.197	Monodelphis_domestica
ENSUMAG00000021174	RPUSD1	93	63.813	ENSMALG00000017818	rpusd1	98	56.536	Monopterus_albus
ENSUMAG00000021174	RPUSD1	100	84.967	MGP_CAROLIEiJ_G0021244	Rpusd1	100	84.641	Mus_caroli
ENSUMAG00000021174	RPUSD1	100	85.621	ENSMUSG00000041199	Rpusd1	100	85.294	Mus_musculus
ENSUMAG00000021174	RPUSD1	100	83.442	MGP_PahariEiJ_G0023562	Rpusd1	100	83.117	Mus_pahari
ENSUMAG00000021174	RPUSD1	100	85.621	MGP_SPRETEiJ_G0022155	Rpusd1	100	85.294	Mus_spretus
ENSUMAG00000021174	RPUSD1	100	92.384	ENSMPUG00000015897	RPUSD1	100	92.384	Mustela_putorius_furo
ENSUMAG00000021174	RPUSD1	100	83.333	ENSMLUG00000001089	RPUSD1	100	83.280	Myotis_lucifugus
ENSUMAG00000021174	RPUSD1	100	82.680	ENSNGAG00000003595	Rpusd1	100	82.680	Nannospalax_galili
ENSUMAG00000021174	RPUSD1	98	59.322	ENSNBRG00000006457	rpusd1	98	59.322	Neolamprologus_brichardi
ENSUMAG00000021174	RPUSD1	55	78.286	ENSNLEG00000008424	-	100	78.286	Nomascus_leucogenys
ENSUMAG00000021174	RPUSD1	100	71.947	ENSMEUG00000016049	RPUSD1	100	71.947	Notamacropus_eugenii
ENSUMAG00000021174	RPUSD1	99	77.667	ENSOPRG00000008340	RPUSD1	99	77.000	Ochotona_princeps
ENSUMAG00000021174	RPUSD1	100	80.719	ENSODEG00000016945	RPUSD1	100	79.739	Octodon_degus
ENSUMAG00000021174	RPUSD1	94	63.077	ENSONIG00000015672	rpusd1	99	57.329	Oreochromis_niloticus
ENSUMAG00000021174	RPUSD1	99	59.406	ENSORLG00000013009	rpusd1	99	59.076	Oryzias_latipes
ENSUMAG00000021174	RPUSD1	94	64.093	ENSORLG00020010382	rpusd1	99	58.746	Oryzias_latipes_hni
ENSUMAG00000021174	RPUSD1	99	58.416	ENSORLG00015021354	rpusd1	99	58.086	Oryzias_latipes_hsok
ENSUMAG00000021174	RPUSD1	98	58.249	ENSOMEG00000021426	rpusd1	98	58.249	Oryzias_melastigma
ENSUMAG00000021174	RPUSD1	100	82.372	ENSOGAG00000003795	RPUSD1	100	82.372	Otolemur_garnettii
ENSUMAG00000021174	RPUSD1	100	85.390	ENSOARG00000014254	RPUSD1	100	84.740	Ovis_aries
ENSUMAG00000021174	RPUSD1	100	79.808	ENSPPAG00000034797	RPUSD1	100	80.449	Pan_paniscus
ENSUMAG00000021174	RPUSD1	100	91.722	ENSPPRG00000012389	RPUSD1	100	91.722	Panthera_pardus
ENSUMAG00000021174	RPUSD1	100	91.722	ENSPTIG00000008545	RPUSD1	92	91.722	Panthera_tigris_altaica
ENSUMAG00000021174	RPUSD1	100	79.808	ENSPTRG00000007565	RPUSD1	100	80.449	Pan_troglodytes
ENSUMAG00000021174	RPUSD1	100	80.449	ENSPANG00000024401	RPUSD1	100	81.090	Papio_anubis
ENSUMAG00000021174	RPUSD1	95	65.267	ENSPKIG00000018890	rpusd1	91	60.855	Paramormyrops_kingsleyae
ENSUMAG00000021174	RPUSD1	99	67.213	ENSPSIG00000013945	RPUSD1	100	66.885	Pelodiscus_sinensis
ENSUMAG00000021174	RPUSD1	97	58.503	ENSPMGG00000014950	rpusd1	97	58.503	Periophthalmus_magnuspinnatus
ENSUMAG00000021174	RPUSD1	100	83.333	ENSPEMG00000000497	Rpusd1	100	82.680	Peromyscus_maniculatus_bairdii
ENSUMAG00000021174	RPUSD1	98	52.303	ENSPMAG00000001563	rpusd1	84	57.915	Petromyzon_marinus
ENSUMAG00000021174	RPUSD1	100	71.803	ENSPCIG00000021216	-	94	71.803	Phascolarctos_cinereus
ENSUMAG00000021174	RPUSD1	94	63.320	ENSPFOG00000007946	rpusd1	98	58.863	Poecilia_formosa
ENSUMAG00000021174	RPUSD1	94	63.320	ENSPLAG00000011925	rpusd1	98	58.863	Poecilia_latipinna
ENSUMAG00000021174	RPUSD1	94	62.934	ENSPMEG00000002910	rpusd1	98	58.528	Poecilia_mexicana
ENSUMAG00000021174	RPUSD1	94	63.707	ENSPREG00000019851	rpusd1	98	59.000	Poecilia_reticulata
ENSUMAG00000021174	RPUSD1	100	69.536	ENSPCAG00000002258	RPUSD1	100	69.205	Procavia_capensis
ENSUMAG00000021174	RPUSD1	100	83.654	ENSPCOG00000022582	RPUSD1	100	83.333	Propithecus_coquereli
ENSUMAG00000021174	RPUSD1	100	81.731	ENSPVAG00000013104	RPUSD1	100	80.769	Pteropus_vampyrus
ENSUMAG00000021174	RPUSD1	98	58.644	ENSPNYG00000024076	rpusd1	98	58.983	Pundamilia_nyererei
ENSUMAG00000021174	RPUSD1	99	59.532	ENSPNAG00000013806	rpusd1	100	59.197	Pygocentrus_nattereri
ENSUMAG00000021174	RPUSD1	100	84.314	ENSRNOG00000023639	Rpusd1	100	83.987	Rattus_norvegicus
ENSUMAG00000021174	RPUSD1	100	80.769	ENSRBIG00000030238	RPUSD1	100	81.410	Rhinopithecus_bieti
ENSUMAG00000021174	RPUSD1	100	80.769	ENSRROG00000036663	RPUSD1	100	81.410	Rhinopithecus_roxellana
ENSUMAG00000021174	RPUSD1	100	83.444	ENSSBOG00000033063	RPUSD1	100	83.444	Saimiri_boliviensis_boliviensis
ENSUMAG00000021174	RPUSD1	100	70.492	ENSSHAG00000013500	RPUSD1	100	70.492	Sarcophilus_harrisii
ENSUMAG00000021174	RPUSD1	99	61.130	ENSSFOG00015014394	rpusd1	99	61.130	Scleropages_formosus
ENSUMAG00000021174	RPUSD1	98	56.393	ENSSMAG00000008045	rpusd1	91	56.721	Scophthalmus_maximus
ENSUMAG00000021174	RPUSD1	91	66.403	ENSSDUG00000001829	rpusd1	95	59.016	Seriola_dumerili
ENSUMAG00000021174	RPUSD1	91	66.403	ENSSLDG00000020853	rpusd1	95	59.016	Seriola_lalandi_dorsalis
ENSUMAG00000021174	RPUSD1	60	86.228	ENSSARG00000011187	-	100	86.228	Sorex_araneus
ENSUMAG00000021174	RPUSD1	62	56.771	ENSSPUG00000005119	-	100	54.592	Sphenodon_punctatus
ENSUMAG00000021174	RPUSD1	91	65.613	ENSSPAG00000012708	rpusd1	98	57.705	Stegastes_partitus
ENSUMAG00000021174	RPUSD1	100	83.333	ENSSSCG00000008000	RPUSD1	99	85.992	Sus_scrofa
ENSUMAG00000021174	RPUSD1	92	74.409	ENSTGUG00000015375	RPUSD1	100	74.510	Taeniopygia_guttata
ENSUMAG00000021174	RPUSD1	94	61.923	ENSTRUG00000003041	rpusd1	98	56.536	Takifugu_rubripes
ENSUMAG00000021174	RPUSD1	98	55.068	ENSTNIG00000002660	rpusd1	99	55.068	Tetraodon_nigroviridis
ENSUMAG00000021174	RPUSD1	100	83.974	ENSTTRG00000010167	RPUSD1	100	83.654	Tursiops_truncatus
ENSUMAG00000021174	RPUSD1	100	99.669	ENSUAMG00000012736	RPUSD1	100	99.669	Ursus_americanus
ENSUMAG00000021174	RPUSD1	100	94.702	ENSVVUG00000012357	RPUSD1	100	94.702	Vulpes_vulpes
ENSUMAG00000021174	RPUSD1	100	61.842	ENSXETG00000007184	rpusd1	100	61.842	Xenopus_tropicalis
ENSUMAG00000021174	RPUSD1	94	63.320	ENSXCOG00000017930	rpusd1	98	58.667	Xiphophorus_couchianus
ENSUMAG00000021174	RPUSD1	94	62.548	ENSXMAG00000024084	rpusd1	98	58.000	Xiphophorus_maculatus