EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000021369 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 12759 bases
Position: chrKK498677.1:4751377-4764135
Accession: 25792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000029496	HVSL	PF09749.9	7e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000034853	USB1-201	1630	-	ENSUMAP00000029496	214 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000021369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000021369's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000021369	USB1	100	85.981	ENSG00000103005	USB1	100	85.981	Homo_sapiens
ENSUMAG00000021369	USB1	100	53.738	ENSAPOG00000011942	usb1	76	53.738	Acanthochromis_polyacanthus
ENSUMAG00000021369	USB1	100	97.664	ENSAMEG00000017205	USB1	80	97.664	Ailuropoda_melanoleuca
ENSUMAG00000021369	USB1	100	56.542	ENSACIG00000012234	usb1	79	56.542	Amphilophus_citrinellus
ENSUMAG00000021369	USB1	100	54.206	ENSAOCG00000014831	usb1	76	54.206	Amphiprion_ocellaris
ENSUMAG00000021369	USB1	100	54.673	ENSAPEG00000000296	usb1	76	54.673	Amphiprion_percula
ENSUMAG00000021369	USB1	100	55.140	ENSATEG00000009348	usb1	76	55.140	Anabas_testudineus
ENSUMAG00000021369	USB1	95	71.569	ENSAPLG00000002756	USB1	96	69.907	Anas_platyrhynchos
ENSUMAG00000021369	USB1	100	62.500	ENSACAG00000015481	USB1	94	62.500	Anolis_carolinensis
ENSUMAG00000021369	USB1	100	86.449	ENSANAG00000035640	USB1	81	86.449	Aotus_nancymaae
ENSUMAG00000021369	USB1	100	54.206	ENSACLG00000020586	usb1	76	54.206	Astatotilapia_calliptera
ENSUMAG00000021369	USB1	99	53.052	ENSAMXG00000040146	usb1	71	53.052	Astyanax_mexicanus
ENSUMAG00000021369	USB1	100	85.047	ENSBTAG00000015758	USB1	81	85.047	Bos_taurus
ENSUMAG00000021369	USB1	100	88.318	ENSCJAG00000011733	USB1	81	88.318	Callithrix_jacchus
ENSUMAG00000021369	USB1	99	92.019	ENSCAFG00000008556	USB1	57	92.019	Canis_familiaris
ENSUMAG00000021369	USB1	99	92.019	ENSCAFG00020009263	USB1	80	92.019	Canis_lupus_dingo
ENSUMAG00000021369	USB1	100	85.047	ENSCHIG00000024290	USB1	81	85.047	Capra_hircus
ENSUMAG00000021369	USB1	100	90.187	ENSTSYG00000006997	USB1	81	90.187	Carlito_syrichta
ENSUMAG00000021369	USB1	100	70.093	ENSCAPG00000009057	USB1	91	70.093	Cavia_aperea
ENSUMAG00000021369	USB1	100	86.916	ENSCPOG00000014325	USB1	80	86.916	Cavia_porcellus
ENSUMAG00000021369	USB1	100	86.916	ENSCCAG00000022132	USB1	81	86.916	Cebus_capucinus
ENSUMAG00000021369	USB1	100	88.318	ENSCATG00000032174	USB1	81	88.318	Cercocebus_atys
ENSUMAG00000021369	USB1	82	88.068	ENSCLAG00000007363	USB1	100	88.068	Chinchilla_lanigera
ENSUMAG00000021369	USB1	100	88.785	ENSCSAG00000004783	USB1	81	88.785	Chlorocebus_sabaeus
ENSUMAG00000021369	USB1	100	66.822	ENSCPBG00000026943	USB1	77	66.822	Chrysemys_picta_bellii
ENSUMAG00000021369	USB1	98	31.416	ENSCING00000011490	-	81	31.416	Ciona_intestinalis
ENSUMAG00000021369	USB1	96	31.455	ENSCSAVG00000000894	-	76	31.455	Ciona_savignyi
ENSUMAG00000021369	USB1	100	87.850	ENSCANG00000037135	USB1	81	87.850	Colobus_angolensis_palliatus
ENSUMAG00000021369	USB1	100	86.449	ENSCGRG00001011243	USB1	80	86.449	Cricetulus_griseus_chok1gshd
ENSUMAG00000021369	USB1	100	86.449	ENSCGRG00000013252	USB1	80	86.449	Cricetulus_griseus_crigri
ENSUMAG00000021369	USB1	100	52.804	ENSCSEG00000013881	usb1	77	52.804	Cynoglossus_semilaevis
ENSUMAG00000021369	USB1	95	50.490	ENSCVAG00000009252	usb1	93	49.083	Cyprinodon_variegatus
ENSUMAG00000021369	USB1	100	50.935	ENSDARG00000003841	usb1	78	50.935	Danio_rerio
ENSUMAG00000021369	USB1	100	83.178	ENSDORG00000001888	Usb1	81	83.178	Dipodomys_ordii
ENSUMAG00000021369	USB1	95	40.000	FBgn0037713	CG16790	78	40.000	Drosophila_melanogaster
ENSUMAG00000021369	USB1	100	70.093	ENSETEG00000019682	USB1	80	70.093	Echinops_telfairi
ENSUMAG00000021369	USB1	99	50.704	ENSEBUG00000005889	usb1	74	50.704	Eptatretus_burgeri
ENSUMAG00000021369	USB1	100	88.318	ENSEASG00005005484	USB1	81	88.318	Equus_asinus_asinus
ENSUMAG00000021369	USB1	100	88.318	ENSECAG00000019493	USB1	74	88.318	Equus_caballus
ENSUMAG00000021369	USB1	82	77.841	ENSEEUG00000000154	USB1	66	77.841	Erinaceus_europaeus
ENSUMAG00000021369	USB1	100	49.302	ENSELUG00000010974	usb1	79	49.302	Esox_lucius
ENSUMAG00000021369	USB1	100	90.187	ENSFCAG00000002693	USB1	80	90.187	Felis_catus
ENSUMAG00000021369	USB1	99	66.351	ENSFALG00000006876	USB1	79	66.351	Ficedula_albicollis
ENSUMAG00000021369	USB1	100	85.981	ENSFDAG00000010052	USB1	80	85.981	Fukomys_damarensis
ENSUMAG00000021369	USB1	71	58.278	ENSFHEG00000012334	usb1	67	55.689	Fundulus_heteroclitus
ENSUMAG00000021369	USB1	98	52.153	ENSGMOG00000004228	usb1	94	52.153	Gadus_morhua
ENSUMAG00000021369	USB1	100	67.442	ENSGALG00000035604	USB1	84	67.442	Gallus_gallus
ENSUMAG00000021369	USB1	100	53.023	ENSGAFG00000021890	usb1	77	53.023	Gambusia_affinis
ENSUMAG00000021369	USB1	100	51.869	ENSGACG00000003257	usb1	77	51.869	Gasterosteus_aculeatus
ENSUMAG00000021369	USB1	100	66.355	ENSGAGG00000022572	USB1	78	66.355	Gopherus_agassizii
ENSUMAG00000021369	USB1	100	86.916	ENSGGOG00000017147	USB1	81	86.916	Gorilla_gorilla
ENSUMAG00000021369	USB1	100	54.673	ENSHBUG00000009823	usb1	76	54.673	Haplochromis_burtoni
ENSUMAG00000021369	USB1	100	85.047	ENSHGLG00000016078	USB1	78	85.047	Heterocephalus_glaber_female
ENSUMAG00000021369	USB1	100	85.047	ENSHGLG00100005562	USB1	78	85.047	Heterocephalus_glaber_male
ENSUMAG00000021369	USB1	99	54.930	ENSHCOG00000015633	usb1	82	54.930	Hippocampus_comes
ENSUMAG00000021369	USB1	100	54.206	ENSIPUG00000008601	usb1	74	54.206	Ictalurus_punctatus
ENSUMAG00000021369	USB1	100	87.850	ENSSTOG00000007548	USB1	78	87.850	Ictidomys_tridecemlineatus
ENSUMAG00000021369	USB1	100	87.383	ENSJJAG00000021859	Usb1	80	87.383	Jaculus_jaculus
ENSUMAG00000021369	USB1	100	53.271	ENSKMAG00000007200	usb1	75	53.271	Kryptolebias_marmoratus
ENSUMAG00000021369	USB1	88	53.439	ENSLBEG00000008452	usb1	61	54.144	Labrus_bergylta
ENSUMAG00000021369	USB1	86	62.366	ENSLACG00000000105	USB1	66	62.304	Latimeria_chalumnae
ENSUMAG00000021369	USB1	100	56.075	ENSLOCG00000000465	usb1	76	56.075	Lepisosteus_oculatus
ENSUMAG00000021369	USB1	100	66.355	ENSLAFG00000002267	USB1	79	66.822	Loxodonta_africana
ENSUMAG00000021369	USB1	100	88.318	ENSMFAG00000003926	USB1	81	88.318	Macaca_fascicularis
ENSUMAG00000021369	USB1	100	88.318	ENSMMUG00000022669	USB1	81	88.318	Macaca_mulatta
ENSUMAG00000021369	USB1	100	87.850	ENSMNEG00000042487	USB1	81	87.850	Macaca_nemestrina
ENSUMAG00000021369	USB1	100	88.318	ENSMLEG00000028756	USB1	81	88.318	Mandrillus_leucophaeus
ENSUMAG00000021369	USB1	100	53.738	ENSMAMG00000015092	usb1	77	53.738	Mastacembelus_armatus
ENSUMAG00000021369	USB1	100	54.206	ENSMZEG00005010008	usb1	76	54.206	Maylandia_zebra
ENSUMAG00000021369	USB1	100	84.579	ENSMAUG00000007832	Usb1	80	84.579	Mesocricetus_auratus
ENSUMAG00000021369	USB1	100	87.383	ENSMICG00000004900	USB1	81	87.383	Microcebus_murinus
ENSUMAG00000021369	USB1	100	85.047	ENSMOCG00000022647	Usb1	80	85.047	Microtus_ochrogaster
ENSUMAG00000021369	USB1	95	54.412	ENSMMOG00000000490	usb1	79	54.412	Mola_mola
ENSUMAG00000021369	USB1	100	70.093	ENSMODG00000014067	USB1	80	70.093	Monodelphis_domestica
ENSUMAG00000021369	USB1	100	53.738	ENSMALG00000005930	usb1	76	53.738	Monopterus_albus
ENSUMAG00000021369	USB1	100	82.710	MGP_CAROLIEiJ_G0031421	Usb1	100	79.646	Mus_caroli
ENSUMAG00000021369	USB1	100	83.178	ENSMUSG00000031792	Usb1	100	80.531	Mus_musculus
ENSUMAG00000021369	USB1	100	84.112	MGP_PahariEiJ_G0023019	Usb1	100	82.906	Mus_pahari
ENSUMAG00000021369	USB1	100	82.243	MGP_SPRETEiJ_G0032540	Usb1	80	82.243	Mus_spretus
ENSUMAG00000021369	USB1	100	92.056	ENSMPUG00000004684	USB1	76	92.056	Mustela_putorius_furo
ENSUMAG00000021369	USB1	100	86.916	ENSMLUG00000007400	USB1	93	86.916	Myotis_lucifugus
ENSUMAG00000021369	USB1	100	88.318	ENSNGAG00000009703	Usb1	80	88.318	Nannospalax_galili
ENSUMAG00000021369	USB1	100	53.271	ENSNBRG00000008747	usb1	99	53.271	Neolamprologus_brichardi
ENSUMAG00000021369	USB1	93	87.437	ENSNLEG00000003340	USB1	80	87.437	Nomascus_leucogenys
ENSUMAG00000021369	USB1	70	84.848	ENSOPRG00000011803	USB1	64	84.848	Ochotona_princeps
ENSUMAG00000021369	USB1	100	85.981	ENSODEG00000016214	USB1	80	85.981	Octodon_degus
ENSUMAG00000021369	USB1	100	54.206	ENSONIG00000011063	usb1	77	54.206	Oreochromis_niloticus
ENSUMAG00000021369	USB1	100	71.628	ENSOANG00000012118	USB1	90	71.628	Ornithorhynchus_anatinus
ENSUMAG00000021369	USB1	100	50.935	ENSORLG00000012479	usb1	78	50.935	Oryzias_latipes
ENSUMAG00000021369	USB1	100	50.467	ENSORLG00020018671	usb1	79	50.467	Oryzias_latipes_hni
ENSUMAG00000021369	USB1	100	50.935	ENSORLG00015009679	usb1	79	50.935	Oryzias_latipes_hsok
ENSUMAG00000021369	USB1	100	51.869	ENSOMEG00000012930	usb1	77	51.869	Oryzias_melastigma
ENSUMAG00000021369	USB1	100	78.505	ENSOGAG00000003273	USB1	79	78.505	Otolemur_garnettii
ENSUMAG00000021369	USB1	100	85.514	ENSOARG00000001107	USB1	82	85.514	Ovis_aries
ENSUMAG00000021369	USB1	100	86.449	ENSPPAG00000042137	USB1	81	86.449	Pan_paniscus
ENSUMAG00000021369	USB1	100	89.252	ENSPPRG00000024797	USB1	80	89.252	Panthera_pardus
ENSUMAG00000021369	USB1	100	88.785	ENSPTIG00000007506	USB1	80	88.785	Panthera_tigris_altaica
ENSUMAG00000021369	USB1	100	86.916	ENSPTRG00000008172	USB1	100	86.916	Pan_troglodytes
ENSUMAG00000021369	USB1	100	88.318	ENSPANG00000025138	USB1	81	88.318	Papio_anubis
ENSUMAG00000021369	USB1	97	53.846	ENSPKIG00000015109	usb1	71	53.846	Paramormyrops_kingsleyae
ENSUMAG00000021369	USB1	100	52.093	ENSPSIG00000004305	USB1	95	52.093	Pelodiscus_sinensis
ENSUMAG00000021369	USB1	100	50.000	ENSPMGG00000017725	usb1	82	50.000	Periophthalmus_magnuspinnatus
ENSUMAG00000021369	USB1	100	85.514	ENSPEMG00000016183	Usb1	79	85.514	Peromyscus_maniculatus_bairdii
ENSUMAG00000021369	USB1	100	50.463	ENSPMAG00000000462	usb1	91	50.463	Petromyzon_marinus
ENSUMAG00000021369	USB1	100	53.488	ENSPFOG00000011130	usb1	77	53.488	Poecilia_formosa
ENSUMAG00000021369	USB1	100	52.558	ENSPLAG00000009820	usb1	77	52.558	Poecilia_latipinna
ENSUMAG00000021369	USB1	100	53.488	ENSPMEG00000006402	usb1	77	53.488	Poecilia_mexicana
ENSUMAG00000021369	USB1	77	57.576	ENSPREG00000001047	usb1	73	55.249	Poecilia_reticulata
ENSUMAG00000021369	USB1	93	82.587	ENSPPYG00000007401	USB1	80	82.587	Pongo_abelii
ENSUMAG00000021369	USB1	100	88.785	ENSPCOG00000022612	USB1	81	88.785	Propithecus_coquereli
ENSUMAG00000021369	USB1	100	83.178	ENSPVAG00000004613	USB1	83	83.178	Pteropus_vampyrus
ENSUMAG00000021369	USB1	100	54.673	ENSPNYG00000022262	usb1	76	54.673	Pundamilia_nyererei
ENSUMAG00000021369	USB1	100	52.336	ENSPNAG00000011736	usb1	73	52.336	Pygocentrus_nattereri
ENSUMAG00000021369	USB1	100	84.579	ENSRNOG00000013216	Usb1	80	84.579	Rattus_norvegicus
ENSUMAG00000021369	USB1	100	88.318	ENSRBIG00000044466	USB1	100	88.318	Rhinopithecus_bieti
ENSUMAG00000021369	USB1	100	88.318	ENSRROG00000029211	USB1	81	88.318	Rhinopithecus_roxellana
ENSUMAG00000021369	USB1	100	87.383	ENSSBOG00000029362	USB1	81	87.383	Saimiri_boliviensis_boliviensis
ENSUMAG00000021369	USB1	100	71.495	ENSSHAG00000006993	USB1	85	71.495	Sarcophilus_harrisii
ENSUMAG00000021369	USB1	99	57.746	ENSSFOG00015023663	usb1	67	57.746	Scleropages_formosus
ENSUMAG00000021369	USB1	100	51.754	ENSSMAG00000015834	usb1	77	51.754	Scophthalmus_maximus
ENSUMAG00000021369	USB1	100	55.607	ENSSDUG00000002949	usb1	79	55.607	Seriola_dumerili
ENSUMAG00000021369	USB1	100	55.607	ENSSLDG00000014174	usb1	76	55.607	Seriola_lalandi_dorsalis
ENSUMAG00000021369	USB1	100	65.888	ENSSPUG00000006741	USB1	100	65.888	Sphenodon_punctatus
ENSUMAG00000021369	USB1	100	53.271	ENSSPAG00000007484	usb1	75	53.271	Stegastes_partitus
ENSUMAG00000021369	USB1	100	87.383	ENSSSCG00000002807	USB1	80	87.383	Sus_scrofa
ENSUMAG00000021369	USB1	99	66.351	ENSTGUG00000004792	USB1	83	66.351	Taeniopygia_guttata
ENSUMAG00000021369	USB1	100	51.402	ENSTRUG00000021069	usb1	79	51.402	Takifugu_rubripes
ENSUMAG00000021369	USB1	100	49.533	ENSTNIG00000000626	usb1	79	49.533	Tetraodon_nigroviridis
ENSUMAG00000021369	USB1	100	56.542	ENSTBEG00000001507	USB1	92	56.542	Tupaia_belangeri
ENSUMAG00000021369	USB1	100	100.000	ENSUAMG00000016823	USB1	80	100.000	Ursus_americanus
ENSUMAG00000021369	USB1	56	90.000	ENSVPAG00000009834	-	59	90.000	Vicugna_pacos
ENSUMAG00000021369	USB1	99	92.488	ENSVVUG00000023700	USB1	82	92.488	Vulpes_vulpes
ENSUMAG00000021369	USB1	99	56.542	ENSXETG00000013795	usb1	86	56.542	Xenopus_tropicalis
ENSUMAG00000021369	USB1	100	53.023	ENSXMAG00000024687	usb1	63	53.023	Xiphophorus_maculatus