EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000021631 (Gene tree)
Gene ID: 103660554
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 48924 bases
Position: chrKK498570.1:213883-262806
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000030410	PRP1_N	PF06424.12	1.4e-48	1	1
ENSUMAP00000030409	PRP1_N	PF06424.12	1.4e-48	1	1
ENSUMAP00000030416	PRP1_N	PF06424.12	1.6e-48	1	1
ENSUMAP00000030419	PRP1_N	PF06424.12	2.4e-47	1	1
ENSUMAP00000030413	PRP1_N	PF06424.12	4.8e-47	1	1
ENSUMAP00000030371	PRP1_N	PF06424.12	7.5e-38	1	1
ENSUMAP00000030376	PRP1_N	PF06424.12	7.5e-38	1	1
ENSUMAP00000030379	PRP1_N	PF06424.12	8.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000035939	PRPF6-204	2778	-	ENSUMAP00000030409	925 (aa)	-	-
ENSUMAT00000035905	PRPF6-203	3490	-	ENSUMAP00000030379	829 (aa)	-	-
ENSUMAT00000035902	PRPF6-202	3586	-	ENSUMAP00000030376	861 (aa)	-	-
ENSUMAT00000035949	PRPF6-208	2802	-	ENSUMAP00000030419	933 (aa)	-	-
ENSUMAT00000035940	PRPF6-205	2883	-	ENSUMAP00000030410	960 (aa)	-	-
ENSUMAT00000035897	PRPF6-201	3709	-	ENSUMAP00000030371	902 (aa)	-	-
ENSUMAT00000035943	PRPF6-206	2781	-	ENSUMAP00000030413	926 (aa)	-	-
ENSUMAT00000035946	PRPF6-207	2958	-	ENSUMAP00000030416	985 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000021631's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000021631's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000021631	PRPF6	98	96.087	ENSG00000101161	PRPF6	98	96.087	Homo_sapiens
ENSUMAG00000021631	PRPF6	98	91.087	ENSAPOG00000010395	prpf6	98	88.450	Acanthochromis_polyacanthus
ENSUMAG00000021631	PRPF6	99	97.735	ENSAMEG00000001916	PRPF6	98	97.735	Ailuropoda_melanoleuca
ENSUMAG00000021631	PRPF6	98	91.087	ENSACIG00000019862	prpf6	98	87.667	Amphilophus_citrinellus
ENSUMAG00000021631	PRPF6	98	91.087	ENSAOCG00000012988	prpf6	98	88.450	Amphiprion_ocellaris
ENSUMAG00000021631	PRPF6	98	84.365	ENSAPEG00000008301	prpf6	98	84.783	Amphiprion_percula
ENSUMAG00000021631	PRPF6	98	90.761	ENSATEG00000005581	prpf6	99	87.256	Anabas_testudineus
ENSUMAG00000021631	PRPF6	98	96.413	ENSACAG00000006464	PRPF6	99	91.726	Anolis_carolinensis
ENSUMAG00000021631	PRPF6	100	99.469	ENSANAG00000012661	PRPF6	98	98.188	Aotus_nancymaae
ENSUMAG00000021631	PRPF6	98	90.840	ENSACLG00000025875	prpf6	98	87.461	Astatotilapia_calliptera
ENSUMAG00000021631	PRPF6	98	91.196	ENSAMXG00000001929	prpf6	94	91.630	Astyanax_mexicanus
ENSUMAG00000021631	PRPF6	98	97.500	ENSBTAG00000011656	PRPF6	98	97.500	Bos_taurus
ENSUMAG00000021631	PRPF6	99	99.469	ENSCJAG00000010616	PRPF6	98	99.469	Callithrix_jacchus
ENSUMAG00000021631	PRPF6	98	97.935	ENSCAFG00000013165	PRPF6	98	97.935	Canis_familiaris
ENSUMAG00000021631	PRPF6	98	97.935	ENSCAFG00020002050	PRPF6	98	97.935	Canis_lupus_dingo
ENSUMAG00000021631	PRPF6	98	97.500	ENSCHIG00000018187	PRPF6	98	97.500	Capra_hircus
ENSUMAG00000021631	PRPF6	98	96.739	ENSTSYG00000007814	PRPF6	98	96.739	Carlito_syrichta
ENSUMAG00000021631	PRPF6	98	95.965	ENSCAPG00000015077	PRPF6	100	95.965	Cavia_aperea
ENSUMAG00000021631	PRPF6	98	97.065	ENSCPOG00000007518	PRPF6	98	97.065	Cavia_porcellus
ENSUMAG00000021631	PRPF6	97	95.645	ENSCCAG00000024564	PRPF6	98	92.935	Cebus_capucinus
ENSUMAG00000021631	PRPF6	99	99.646	ENSCATG00000037473	PRPF6	99	99.646	Cercocebus_atys
ENSUMAG00000021631	PRPF6	98	93.043	ENSCLAG00000003854	PRPF6	98	93.043	Chinchilla_lanigera
ENSUMAG00000021631	PRPF6	98	90.821	ENSCSAG00000016742	PRPF6	98	90.821	Chlorocebus_sabaeus
ENSUMAG00000021631	PRPF6	88	81.626	ENSCHOG00000003315	-	100	81.626	Choloepus_hoffmanni
ENSUMAG00000021631	PRPF6	98	96.522	ENSCPBG00000013964	PRPF6	98	92.872	Chrysemys_picta_bellii
ENSUMAG00000021631	PRPF6	98	72.619	ENSCING00000008817	-	97	72.619	Ciona_intestinalis
ENSUMAG00000021631	PRPF6	98	95.978	ENSCANG00000038230	PRPF6	98	95.978	Colobus_angolensis_palliatus
ENSUMAG00000021631	PRPF6	98	97.065	ENSCGRG00001022666	Prpf6	98	97.065	Cricetulus_griseus_chok1gshd
ENSUMAG00000021631	PRPF6	98	85.435	ENSCSEG00000018561	prpf6	98	85.870	Cynoglossus_semilaevis
ENSUMAG00000021631	PRPF6	98	91.087	ENSCVAG00000010550	prpf6	98	88.554	Cyprinodon_variegatus
ENSUMAG00000021631	PRPF6	98	90.978	ENSDARG00000091367	prpf6	97	91.413	Danio_rerio
ENSUMAG00000021631	PRPF6	98	96.304	ENSDNOG00000040544	PRPF6	98	96.304	Dasypus_novemcinctus
ENSUMAG00000021631	PRPF6	91	98.166	ENSDORG00000005406	Prpf6	100	96.379	Dipodomys_ordii
ENSUMAG00000021631	PRPF6	98	70.788	FBgn0036828	CG6841	97	70.915	Drosophila_melanogaster
ENSUMAG00000021631	PRPF6	82	98.810	ENSETEG00000004447	PRPF6	81	98.718	Echinops_telfairi
ENSUMAG00000021631	PRPF6	98	85.374	ENSEBUG00000008835	prpf6	98	85.374	Eptatretus_burgeri
ENSUMAG00000021631	PRPF6	99	96.637	ENSEASG00005023115	PRPF6	99	96.637	Equus_asinus_asinus
ENSUMAG00000021631	PRPF6	98	92.826	ENSECAG00000013983	PRPF6	98	93.152	Equus_caballus
ENSUMAG00000021631	PRPF6	87	96.709	ENSEEUG00000000180	PRPF6	79	96.709	Erinaceus_europaeus
ENSUMAG00000021631	PRPF6	98	89.674	ENSELUG00000001945	prpf6	91	89.674	Esox_lucius
ENSUMAG00000021631	PRPF6	98	97.935	ENSFCAG00000001183	PRPF6	98	97.935	Felis_catus
ENSUMAG00000021631	PRPF6	98	96.413	ENSFALG00000010326	-	95	96.413	Ficedula_albicollis
ENSUMAG00000021631	PRPF6	98	89.348	ENSFALG00000006046	-	99	85.670	Ficedula_albicollis
ENSUMAG00000021631	PRPF6	99	96.757	ENSFDAG00000006451	PRPF6	100	97.166	Fukomys_damarensis
ENSUMAG00000021631	PRPF6	98	91.739	ENSFHEG00000000560	prpf6	98	88.658	Fundulus_heteroclitus
ENSUMAG00000021631	PRPF6	98	87.459	ENSGMOG00000015622	prpf6	97	87.527	Gadus_morhua
ENSUMAG00000021631	PRPF6	98	96.196	ENSGALG00000006001	PRPF6	98	96.196	Gallus_gallus
ENSUMAG00000021631	PRPF6	98	86.369	ENSGAFG00000021109	prpf6	98	83.871	Gambusia_affinis
ENSUMAG00000021631	PRPF6	98	89.640	ENSGACG00000002576	prpf6	97	89.640	Gasterosteus_aculeatus
ENSUMAG00000021631	PRPF6	98	96.413	ENSGAGG00000008653	PRPF6	98	92.865	Gopherus_agassizii
ENSUMAG00000021631	PRPF6	97	99.646	ENSGGOG00000016876	PRPF6	100	99.646	Gorilla_gorilla
ENSUMAG00000021631	PRPF6	98	90.840	ENSHBUG00000004496	prpf6	98	87.461	Haplochromis_burtoni
ENSUMAG00000021631	PRPF6	98	97.065	ENSHGLG00000009222	PRPF6	98	97.065	Heterocephalus_glaber_female
ENSUMAG00000021631	PRPF6	98	97.274	ENSHGLG00100016600	PRPF6	100	97.274	Heterocephalus_glaber_male
ENSUMAG00000021631	PRPF6	98	89.640	ENSHCOG00000011513	prpf6	98	86.536	Hippocampus_comes
ENSUMAG00000021631	PRPF6	98	92.065	ENSIPUG00000004912	prpf6	94	92.065	Ictalurus_punctatus
ENSUMAG00000021631	PRPF6	98	94.245	ENSSTOG00000002922	PRPF6	98	94.028	Ictidomys_tridecemlineatus
ENSUMAG00000021631	PRPF6	98	97.174	ENSJJAG00000000836	Prpf6	98	97.174	Jaculus_jaculus
ENSUMAG00000021631	PRPF6	98	90.870	ENSKMAG00000017800	prpf6	98	88.345	Kryptolebias_marmoratus
ENSUMAG00000021631	PRPF6	98	90.403	ENSLBEG00000012582	prpf6	98	87.409	Labrus_bergylta
ENSUMAG00000021631	PRPF6	98	93.152	ENSLOCG00000004827	prpf6	93	93.275	Lepisosteus_oculatus
ENSUMAG00000021631	PRPF6	98	96.087	ENSLAFG00000005272	PRPF6	98	96.087	Loxodonta_africana
ENSUMAG00000021631	PRPF6	97	99.646	ENSMFAG00000037542	PRPF6	100	99.646	Macaca_fascicularis
ENSUMAG00000021631	PRPF6	94	99.307	ENSMMUG00000015558	PRPF6	98	99.307	Macaca_mulatta
ENSUMAG00000021631	PRPF6	98	81.365	ENSMNEG00000045555	PRPF6	98	81.365	Macaca_nemestrina
ENSUMAG00000021631	PRPF6	98	90.870	ENSMAMG00000010718	prpf6	98	87.461	Mastacembelus_armatus
ENSUMAG00000021631	PRPF6	92	93.478	ENSMZEG00005026539	prpf6	96	93.742	Maylandia_zebra
ENSUMAG00000021631	PRPF6	98	90.523	ENSMZEG00005015261	-	97	90.959	Maylandia_zebra
ENSUMAG00000021631	PRPF6	98	96.619	ENSMGAG00000006634	PRPF6	100	96.619	Meleagris_gallopavo
ENSUMAG00000021631	PRPF6	98	96.957	ENSMAUG00000013969	Prpf6	98	96.957	Mesocricetus_auratus
ENSUMAG00000021631	PRPF6	87	98.087	ENSMICG00000017793	PRPF6	99	96.472	Microcebus_murinus
ENSUMAG00000021631	PRPF6	98	96.848	ENSMOCG00000001701	Prpf6	98	96.848	Microtus_ochrogaster
ENSUMAG00000021631	PRPF6	98	90.109	ENSMMOG00000020419	prpf6	98	90.543	Mola_mola
ENSUMAG00000021631	PRPF6	94	98.862	ENSMODG00000017051	PRPF6	97	98.862	Monodelphis_domestica
ENSUMAG00000021631	PRPF6	98	91.058	ENSMALG00000000089	prpf6	99	90.978	Monopterus_albus
ENSUMAG00000021631	PRPF6	98	90.217	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSUMAG00000021631	PRPF6	98	96.957	ENSMUSG00000002455	Prpf6	100	98.148	Mus_musculus
ENSUMAG00000021631	PRPF6	98	96.957	MGP_PahariEiJ_G0026262	Prpf6	100	98.148	Mus_pahari
ENSUMAG00000021631	PRPF6	98	96.957	MGP_SPRETEiJ_G0025741	Prpf6	100	98.148	Mus_spretus
ENSUMAG00000021631	PRPF6	94	98.927	ENSMPUG00000008673	PRPF6	99	99.038	Mustela_putorius_furo
ENSUMAG00000021631	PRPF6	98	97.174	ENSNGAG00000003365	Prpf6	98	97.174	Nannospalax_galili
ENSUMAG00000021631	PRPF6	98	90.870	ENSNBRG00000015025	prpf6	98	87.564	Neolamprologus_brichardi
ENSUMAG00000021631	PRPF6	97	97.699	ENSNLEG00000010208	PRPF6	100	97.699	Nomascus_leucogenys
ENSUMAG00000021631	PRPF6	98	86.562	ENSMEUG00000009824	-	88	86.562	Notamacropus_eugenii
ENSUMAG00000021631	PRPF6	98	90.870	ENSODEG00000004841	PRPF6	98	90.870	Octodon_degus
ENSUMAG00000021631	PRPF6	98	90.761	ENSONIG00000017406	prpf6	98	87.461	Oreochromis_niloticus
ENSUMAG00000021631	PRPF6	98	96.957	ENSOANG00000004920	PRPF6	98	96.957	Ornithorhynchus_anatinus
ENSUMAG00000021631	PRPF6	98	95.761	ENSOCUG00000014151	PRPF6	99	95.761	Oryctolagus_cuniculus
ENSUMAG00000021631	PRPF6	98	90.543	ENSORLG00000009592	prpf6	94	90.543	Oryzias_latipes
ENSUMAG00000021631	PRPF6	98	90.652	ENSORLG00020001458	prpf6	94	90.652	Oryzias_latipes_hni
ENSUMAG00000021631	PRPF6	98	90.652	ENSORLG00015018762	prpf6	94	90.652	Oryzias_latipes_hsok
ENSUMAG00000021631	PRPF6	98	90.326	ENSOMEG00000012174	prpf6	94	90.761	Oryzias_melastigma
ENSUMAG00000021631	PRPF6	98	89.034	ENSOGAG00000007573	PRPF6	98	89.034	Otolemur_garnettii
ENSUMAG00000021631	PRPF6	98	97.500	ENSOARG00000008776	PRPF6	98	97.177	Ovis_aries
ENSUMAG00000021631	PRPF6	97	99.646	ENSPPAG00000008686	PRPF6	100	99.646	Pan_paniscus
ENSUMAG00000021631	PRPF6	98	97.826	ENSPPRG00000008497	PRPF6	98	97.826	Panthera_pardus
ENSUMAG00000021631	PRPF6	98	98.037	ENSPTIG00000011184	PRPF6	97	98.037	Panthera_tigris_altaica
ENSUMAG00000021631	PRPF6	97	99.646	ENSPTRG00000013765	PRPF6	100	99.646	Pan_troglodytes
ENSUMAG00000021631	PRPF6	100	99.292	ENSPANG00000024135	PRPF6	98	95.870	Papio_anubis
ENSUMAG00000021631	PRPF6	98	92.391	ENSPKIG00000005627	prpf6	97	92.617	Paramormyrops_kingsleyae
ENSUMAG00000021631	PRPF6	94	98.815	ENSPSIG00000007717	PRPF6	100	96.825	Pelodiscus_sinensis
ENSUMAG00000021631	PRPF6	98	88.780	ENSPMGG00000008925	prpf6	94	88.998	Periophthalmus_magnuspinnatus
ENSUMAG00000021631	PRPF6	98	96.848	ENSPEMG00000016036	Prpf6	98	96.848	Peromyscus_maniculatus_bairdii
ENSUMAG00000021631	PRPF6	98	86.876	ENSPMAG00000006144	prpf6	97	86.942	Petromyzon_marinus
ENSUMAG00000021631	PRPF6	98	96.957	ENSPCIG00000017909	PRPF6	98	96.957	Phascolarctos_cinereus
ENSUMAG00000021631	PRPF6	98	91.304	ENSPFOG00000006431	prpf6	97	88.762	Poecilia_formosa
ENSUMAG00000021631	PRPF6	98	91.276	ENSPLAG00000005974	prpf6	98	88.658	Poecilia_latipinna
ENSUMAG00000021631	PRPF6	98	91.494	ENSPMEG00000009977	prpf6	98	88.866	Poecilia_mexicana
ENSUMAG00000021631	PRPF6	98	91.385	ENSPREG00000017993	prpf6	93	88.658	Poecilia_reticulata
ENSUMAG00000021631	PRPF6	98	95.543	ENSPPYG00000011256	PRPF6	98	95.543	Pongo_abelii
ENSUMAG00000021631	PRPF6	94	99.653	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSUMAG00000021631	PRPF6	99	99.115	ENSPCOG00000016881	PRPF6	98	96.304	Propithecus_coquereli
ENSUMAG00000021631	PRPF6	98	90.543	ENSPVAG00000014316	PRPF6	98	90.870	Pteropus_vampyrus
ENSUMAG00000021631	PRPF6	98	74.074	ENSPNYG00000001939	prpf6	85	91.259	Pundamilia_nyererei
ENSUMAG00000021631	PRPF6	98	91.630	ENSPNAG00000015606	prpf6	94	92.065	Pygocentrus_nattereri
ENSUMAG00000021631	PRPF6	98	96.848	ENSRNOG00000051498	Prpf6	98	96.848	Rattus_norvegicus
ENSUMAG00000021631	PRPF6	97	97.924	ENSRBIG00000043613	PRPF6	100	97.924	Rhinopithecus_bieti
ENSUMAG00000021631	PRPF6	97	97.924	ENSRROG00000040969	PRPF6	100	97.924	Rhinopithecus_roxellana
ENSUMAG00000021631	PRPF6	99	95.044	ENSSBOG00000020632	PRPF6	98	95.044	Saimiri_boliviensis_boliviensis
ENSUMAG00000021631	PRPF6	98	96.957	ENSSHAG00000016810	PRPF6	98	96.957	Sarcophilus_harrisii
ENSUMAG00000021631	PRPF6	98	92.717	ENSSFOG00015020859	prpf6	99	93.152	Scleropages_formosus
ENSUMAG00000021631	PRPF6	98	90.185	ENSSMAG00000008112	prpf6	99	86.509	Scophthalmus_maximus
ENSUMAG00000021631	PRPF6	98	90.840	ENSSDUG00000016142	prpf6	94	91.196	Seriola_dumerili
ENSUMAG00000021631	PRPF6	98	90.840	ENSSLDG00000025283	prpf6	98	87.609	Seriola_lalandi_dorsalis
ENSUMAG00000021631	PRPF6	94	97.156	ENSSPUG00000018260	PRPF6	99	97.156	Sphenodon_punctatus
ENSUMAG00000021631	PRPF6	98	90.840	ENSSPAG00000015850	prpf6	94	91.196	Stegastes_partitus
ENSUMAG00000021631	PRPF6	98	97.391	ENSSSCG00000029119	PRPF6	100	97.506	Sus_scrofa
ENSUMAG00000021631	PRPF6	98	96.522	ENSTGUG00000007221	PRPF6	98	96.308	Taeniopygia_guttata
ENSUMAG00000021631	PRPF6	98	89.891	ENSTRUG00000002920	prpf6	98	87.409	Takifugu_rubripes
ENSUMAG00000021631	PRPF6	98	83.459	ENSTNIG00000017873	prpf6	98	83.892	Tetraodon_nigroviridis
ENSUMAG00000021631	PRPF6	89	98.343	ENSTBEG00000005348	PRPF6	85	98.343	Tupaia_belangeri
ENSUMAG00000021631	PRPF6	98	96.848	ENSTTRG00000013068	PRPF6	98	96.848	Tursiops_truncatus
ENSUMAG00000021631	PRPF6	98	97.935	ENSVVUG00000014948	PRPF6	98	97.935	Vulpes_vulpes
ENSUMAG00000021631	PRPF6	98	93.804	ENSXETG00000012054	prpf6	95	94.239	Xenopus_tropicalis
ENSUMAG00000021631	PRPF6	98	91.413	ENSXCOG00000008082	prpf6	98	88.866	Xiphophorus_couchianus
ENSUMAG00000021631	PRPF6	98	91.413	ENSXMAG00000015581	prpf6	98	88.866	Xiphophorus_maculatus