EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000021918 (Gene tree)
Gene ID: 103668721
Gene Symbol: SWT1
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 112502 bases
Position: chrKK498516.1:21582944-21695445
Accession: 103668721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000030274	PIN_4	PF13638.6	9.2e-28	1	1
ENSUMAP00000030277	PIN_4	PF13638.6	9.8e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000035790	SWT1-202	3204	-	ENSUMAP00000030277	901 (aa)	XP_008695250	UPI0004DFF13B
ENSUMAT00000035787	SWT1-201	3255	-	ENSUMAP00000030274	861 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000021918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000021918's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000021918	SWT1	99	78.895	ENSG00000116668	SWT1	99	78.895	Homo_sapiens
ENSUMAG00000021918	SWT1	61	33.868	ENSAPOG00000014897	-	58	33.793	Acanthochromis_polyacanthus
ENSUMAG00000021918	SWT1	100	96.674	ENSAMEG00000013585	SWT1	100	96.674	Ailuropoda_melanoleuca
ENSUMAG00000021918	SWT1	61	34.107	ENSAOCG00000013932	swt1	58	34.310	Amphiprion_ocellaris
ENSUMAG00000021918	SWT1	61	33.929	ENSAPEG00000009613	-	58	34.138	Amphiprion_percula
ENSUMAG00000021918	SWT1	68	34.185	ENSATEG00000018946	swt1	64	34.365	Anabas_testudineus
ENSUMAG00000021918	SWT1	78	49.860	ENSAPLG00000008607	SWT1	96	50.000	Anas_platyrhynchos
ENSUMAG00000021918	SWT1	62	48.057	ENSACAG00000002276	SWT1	65	48.057	Anolis_carolinensis
ENSUMAG00000021918	SWT1	99	79.116	ENSANAG00000027068	SWT1	99	79.116	Aotus_nancymaae
ENSUMAG00000021918	SWT1	62	33.966	ENSACLG00000009742	swt1	68	33.793	Astatotilapia_calliptera
ENSUMAG00000021918	SWT1	65	40.436	ENSAMXG00000010971	swt1	59	40.678	Astyanax_mexicanus
ENSUMAG00000021918	SWT1	75	74.962	ENSBTAG00000004492	SWT1	100	79.018	Bos_taurus
ENSUMAG00000021918	SWT1	100	77.925	ENSCJAG00000005544	SWT1	100	77.925	Callithrix_jacchus
ENSUMAG00000021918	SWT1	100	88.027	ENSCAFG00000013543	SWT1	99	88.023	Canis_familiaris
ENSUMAG00000021918	SWT1	100	86.579	ENSCAFG00020015648	SWT1	99	88.797	Canis_lupus_dingo
ENSUMAG00000021918	SWT1	91	81.719	ENSCHIG00000023511	SWT1	100	86.125	Capra_hircus
ENSUMAG00000021918	SWT1	100	79.691	ENSTSYG00000010470	SWT1	100	79.691	Carlito_syrichta
ENSUMAG00000021918	SWT1	97	75.357	ENSCPOG00000014251	SWT1	100	74.762	Cavia_porcellus
ENSUMAG00000021918	SWT1	99	78.895	ENSCCAG00000033926	SWT1	99	78.895	Cebus_capucinus
ENSUMAG00000021918	SWT1	99	79.075	ENSCATG00000042210	SWT1	99	85.520	Cercocebus_atys
ENSUMAG00000021918	SWT1	99	76.058	ENSCLAG00000013959	SWT1	99	75.390	Chinchilla_lanigera
ENSUMAG00000021918	SWT1	99	78.744	ENSCSAG00000012895	SWT1	99	78.744	Chlorocebus_sabaeus
ENSUMAG00000021918	SWT1	64	86.875	ENSCHOG00000002211	-	64	86.875	Choloepus_hoffmanni
ENSUMAG00000021918	SWT1	94	47.646	ENSCPBG00000015691	SWT1	95	47.766	Chrysemys_picta_bellii
ENSUMAG00000021918	SWT1	99	79.006	ENSCANG00000032207	SWT1	99	85.103	Colobus_angolensis_palliatus
ENSUMAG00000021918	SWT1	100	72.093	ENSCGRG00001022955	Swt1	100	69.767	Cricetulus_griseus_chok1gshd
ENSUMAG00000021918	SWT1	100	72.093	ENSCGRG00000010224	Swt1	100	71.761	Cricetulus_griseus_crigri
ENSUMAG00000021918	SWT1	62	33.507	ENSCSEG00000017352	swt1	75	33.333	Cynoglossus_semilaevis
ENSUMAG00000021918	SWT1	62	40.000	ENSDARG00000094010	swt1	57	40.000	Danio_rerio
ENSUMAG00000021918	SWT1	95	74.517	ENSDNOG00000005254	SWT1	100	74.517	Dasypus_novemcinctus
ENSUMAG00000021918	SWT1	89	78.934	ENSDORG00000010531	Swt1	95	78.934	Dipodomys_ordii
ENSUMAG00000021918	SWT1	92	79.207	ENSEASG00005005530	SWT1	97	81.130	Equus_asinus_asinus
ENSUMAG00000021918	SWT1	92	80.723	ENSECAG00000012085	SWT1	99	80.695	Equus_caballus
ENSUMAG00000021918	SWT1	85	87.356	ENSEEUG00000003664	SWT1	88	87.356	Erinaceus_europaeus
ENSUMAG00000021918	SWT1	64	37.329	ENSELUG00000020565	swt1	58	37.748	Esox_lucius
ENSUMAG00000021918	SWT1	100	85.951	ENSFCAG00000011286	SWT1	100	85.951	Felis_catus
ENSUMAG00000021918	SWT1	64	52.640	ENSFALG00000003206	SWT1	73	49.396	Ficedula_albicollis
ENSUMAG00000021918	SWT1	100	75.221	ENSFDAG00000007569	SWT1	100	74.668	Fukomys_damarensis
ENSUMAG00000021918	SWT1	64	53.741	ENSGALG00000034230	SWT1	67	53.912	Gallus_gallus
ENSUMAG00000021918	SWT1	74	31.742	ENSGAFG00000007803	-	70	31.742	Gambusia_affinis
ENSUMAG00000021918	SWT1	80	50.829	ENSGAGG00000025050	SWT1	99	58.204	Gopherus_agassizii
ENSUMAG00000021918	SWT1	61	82.418	ENSGGOG00000041167	-	98	82.418	Gorilla_gorilla
ENSUMAG00000021918	SWT1	62	33.833	ENSHBUG00000006188	swt1	68	33.667	Haplochromis_burtoni
ENSUMAG00000021918	SWT1	99	75.476	ENSHGLG00000006542	SWT1	99	75.476	Heterocephalus_glaber_female
ENSUMAG00000021918	SWT1	99	77.517	ENSHGLG00100014408	SWT1	99	77.517	Heterocephalus_glaber_male
ENSUMAG00000021918	SWT1	64	37.793	ENSIPUG00000009113	-	60	37.793	Ictalurus_punctatus
ENSUMAG00000021918	SWT1	100	76.464	ENSSTOG00000010356	SWT1	100	76.796	Ictidomys_tridecemlineatus
ENSUMAG00000021918	SWT1	100	68.514	ENSJJAG00000015927	Swt1	100	68.514	Jaculus_jaculus
ENSUMAG00000021918	SWT1	61	34.130	ENSKMAG00000012533	swt1	58	34.130	Kryptolebias_marmoratus
ENSUMAG00000021918	SWT1	62	36.332	ENSLBEG00000020663	-	59	36.288	Labrus_bergylta
ENSUMAG00000021918	SWT1	76	47.714	ENSLACG00000009194	SWT1	99	47.714	Latimeria_chalumnae
ENSUMAG00000021918	SWT1	62	41.982	ENSLOCG00000001749	swt1	97	41.697	Lepisosteus_oculatus
ENSUMAG00000021918	SWT1	65	86.905	ENSLAFG00000004346	-	100	86.905	Loxodonta_africana
ENSUMAG00000021918	SWT1	99	78.634	ENSMFAG00000031793	SWT1	99	84.957	Macaca_fascicularis
ENSUMAG00000021918	SWT1	99	76.310	ENSMMUG00000013882	SWT1	99	82.302	Macaca_mulatta
ENSUMAG00000021918	SWT1	99	78.414	ENSMNEG00000035502	SWT1	99	84.786	Macaca_nemestrina
ENSUMAG00000021918	SWT1	99	79.337	ENSMLEG00000038692	SWT1	99	85.520	Mandrillus_leucophaeus
ENSUMAG00000021918	SWT1	62	34.000	ENSMZEG00005018489	swt1	68	33.833	Maylandia_zebra
ENSUMAG00000021918	SWT1	64	52.658	ENSMGAG00000000973	SWT1	100	52.658	Meleagris_gallopavo
ENSUMAG00000021918	SWT1	100	65.929	ENSMAUG00000007996	Swt1	97	65.338	Mesocricetus_auratus
ENSUMAG00000021918	SWT1	100	81.236	ENSMICG00000014975	SWT1	100	81.236	Microcebus_murinus
ENSUMAG00000021918	SWT1	100	70.432	ENSMOCG00000009776	Swt1	98	70.210	Microtus_ochrogaster
ENSUMAG00000021918	SWT1	99	60.237	ENSMODG00000007472	SWT1	99	59.978	Monodelphis_domestica
ENSUMAG00000021918	SWT1	61	35.584	ENSMALG00000019308	swt1	57	35.739	Monopterus_albus
ENSUMAG00000021918	SWT1	99	68.625	MGP_CAROLIEiJ_G0014692	Swt1	99	68.625	Mus_caroli
ENSUMAG00000021918	SWT1	99	67.960	ENSMUSG00000052748	Swt1	98	67.960	Mus_musculus
ENSUMAG00000021918	SWT1	100	69.878	MGP_PahariEiJ_G0027928	Swt1	98	69.878	Mus_pahari
ENSUMAG00000021918	SWT1	99	68.625	MGP_SPRETEiJ_G0015499	Swt1	98	68.625	Mus_spretus
ENSUMAG00000021918	SWT1	100	89.690	ENSMPUG00000011913	SWT1	100	89.690	Mustela_putorius_furo
ENSUMAG00000021918	SWT1	99	78.000	ENSMLUG00000001142	SWT1	98	77.913	Myotis_lucifugus
ENSUMAG00000021918	SWT1	100	73.341	ENSNGAG00000021080	Swt1	98	73.562	Nannospalax_galili
ENSUMAG00000021918	SWT1	99	78.343	ENSNLEG00000018031	SWT1	99	77.790	Nomascus_leucogenys
ENSUMAG00000021918	SWT1	100	46.366	ENSMEUG00000000236	-	99	46.476	Notamacropus_eugenii
ENSUMAG00000021918	SWT1	88	69.231	ENSOPRG00000000692	SWT1	88	69.231	Ochotona_princeps
ENSUMAG00000021918	SWT1	68	33.126	ENSONIG00000009994	swt1	99	35.189	Oreochromis_niloticus
ENSUMAG00000021918	SWT1	87	56.522	ENSOANG00000001013	-	100	56.398	Ornithorhynchus_anatinus
ENSUMAG00000021918	SWT1	99	69.095	ENSOCUG00000004901	SWT1	99	69.095	Oryctolagus_cuniculus
ENSUMAG00000021918	SWT1	61	33.215	ENSORLG00000009682	swt1	58	33.448	Oryzias_latipes
ENSUMAG00000021918	SWT1	65	32.779	ENSORLG00020011654	swt1	62	33.011	Oryzias_latipes_hni
ENSUMAG00000021918	SWT1	61	33.215	ENSORLG00015007734	swt1	59	33.448	Oryzias_latipes_hsok
ENSUMAG00000021918	SWT1	61	34.821	ENSOMEG00000006607	swt1	57	35.000	Oryzias_melastigma
ENSUMAG00000021918	SWT1	100	78.650	ENSOGAG00000016195	SWT1	100	78.540	Otolemur_garnettii
ENSUMAG00000021918	SWT1	100	80.531	ENSOARG00000004156	SWT1	98	80.420	Ovis_aries
ENSUMAG00000021918	SWT1	99	78.453	ENSPPAG00000021400	SWT1	99	78.453	Pan_paniscus
ENSUMAG00000021918	SWT1	100	86.726	ENSPPRG00000023754	SWT1	100	86.726	Panthera_pardus
ENSUMAG00000021918	SWT1	100	86.615	ENSPTIG00000021889	SWT1	100	86.615	Panthera_tigris_altaica
ENSUMAG00000021918	SWT1	99	78.453	ENSPTRG00000001777	SWT1	99	78.453	Pan_troglodytes
ENSUMAG00000021918	SWT1	99	78.524	ENSPANG00000005099	SWT1	99	85.009	Papio_anubis
ENSUMAG00000021918	SWT1	62	37.414	ENSPKIG00000005979	swt1	59	37.414	Paramormyrops_kingsleyae
ENSUMAG00000021918	SWT1	97	44.381	ENSPSIG00000008961	SWT1	99	45.307	Pelodiscus_sinensis
ENSUMAG00000021918	SWT1	100	71.318	ENSPEMG00000008208	Swt1	98	70.875	Peromyscus_maniculatus_bairdii
ENSUMAG00000021918	SWT1	100	60.212	ENSPCIG00000002443	SWT1	99	70.803	Phascolarctos_cinereus
ENSUMAG00000021918	SWT1	74	31.065	ENSPFOG00000010988	-	69	33.611	Poecilia_formosa
ENSUMAG00000021918	SWT1	74	31.213	ENSPLAG00000022908	-	68	31.223	Poecilia_latipinna
ENSUMAG00000021918	SWT1	74	31.065	ENSPMEG00000006943	-	68	31.079	Poecilia_mexicana
ENSUMAG00000021918	SWT1	99	78.453	ENSPPYG00000000415	SWT1	99	78.453	Pongo_abelii
ENSUMAG00000021918	SWT1	93	75.194	ENSPCAG00000008337	SWT1	93	75.194	Procavia_capensis
ENSUMAG00000021918	SWT1	69	85.714	ENSPCOG00000018195	-	93	85.714	Propithecus_coquereli
ENSUMAG00000021918	SWT1	87	81.373	ENSPVAG00000005968	SWT1	87	82.113	Pteropus_vampyrus
ENSUMAG00000021918	SWT1	62	34.000	ENSPNYG00000012934	swt1	68	33.833	Pundamilia_nyererei
ENSUMAG00000021918	SWT1	65	38.308	ENSPNAG00000017795	swt1	61	38.308	Pygocentrus_nattereri
ENSUMAG00000021918	SWT1	100	70.055	ENSRNOG00000032258	Swt1	98	70.055	Rattus_norvegicus
ENSUMAG00000021918	SWT1	99	75.801	ENSRBIG00000040630	SWT1	99	81.678	Rhinopithecus_bieti
ENSUMAG00000021918	SWT1	73	76.850	ENSRROG00000028596	SWT1	100	76.850	Rhinopithecus_roxellana
ENSUMAG00000021918	SWT1	99	79.493	ENSSBOG00000028825	SWT1	99	79.493	Saimiri_boliviensis_boliviensis
ENSUMAG00000021918	SWT1	100	59.807	ENSSHAG00000009241	SWT1	99	59.807	Sarcophilus_harrisii
ENSUMAG00000021918	SWT1	62	40.598	ENSSFOG00015004895	swt1	57	40.070	Scleropages_formosus
ENSUMAG00000021918	SWT1	61	34.107	ENSSDUG00000012345	swt1	58	34.310	Seriola_dumerili
ENSUMAG00000021918	SWT1	61	33.929	ENSSLDG00000003821	swt1	58	34.138	Seriola_lalandi_dorsalis
ENSUMAG00000021918	SWT1	60	50.193	ENSSARG00000011524	-	99	50.193	Sorex_araneus
ENSUMAG00000021918	SWT1	78	49.041	ENSSPUG00000003899	SWT1	79	49.378	Sphenodon_punctatus
ENSUMAG00000021918	SWT1	61	31.919	ENSSPAG00000001030	swt1	59	31.919	Stegastes_partitus
ENSUMAG00000021918	SWT1	95	85.129	ENSSSCG00000015569	SWT1	100	83.628	Sus_scrofa
ENSUMAG00000021918	SWT1	62	54.025	ENSTGUG00000003718	-	100	54.025	Taeniopygia_guttata
ENSUMAG00000021918	SWT1	65	34.609	ENSTRUG00000006420	swt1	67	34.560	Takifugu_rubripes
ENSUMAG00000021918	SWT1	54	88.710	ENSTBEG00000016891	-	54	88.710	Tupaia_belangeri
ENSUMAG00000021918	SWT1	100	79.912	ENSTTRG00000005914	SWT1	100	79.581	Tursiops_truncatus
ENSUMAG00000021918	SWT1	100	97.447	ENSUAMG00000020937	SWT1	99	99.272	Ursus_americanus
ENSUMAG00000021918	SWT1	92	88.180	ENSVPAG00000011855	SWT1	92	88.180	Vicugna_pacos
ENSUMAG00000021918	SWT1	100	88.470	ENSVVUG00000009182	SWT1	100	88.581	Vulpes_vulpes
ENSUMAG00000021918	SWT1	74	32.444	ENSXMAG00000023472	-	69	32.528	Xiphophorus_maculatus