EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000022002 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 6194 bases
Position: chrKK498509.1:1936985-1943178
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000030458	ECR1_N	PF14382.6	5.1e-09	1	1
ENSUMAP00000030457	ECR1_N	PF14382.6	6.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000035991	EXOSC1-202	465	-	ENSUMAP00000030458	154 (aa)	-	-
ENSUMAT00000035990	EXOSC1-201	540	-	ENSUMAP00000030457	179 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000022002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000022002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000022002	EXOSC1	100	83.240	ENSG00000171311	EXOSC1	100	81.026	Homo_sapiens
ENSUMAG00000022002	EXOSC1	98	64.398	ENSAPOG00000007822	exosc1	98	64.398	Acanthochromis_polyacanthus
ENSUMAG00000022002	EXOSC1	100	83.077	ENSAMEG00000000129	EXOSC1	100	83.077	Ailuropoda_melanoleuca
ENSUMAG00000022002	EXOSC1	96	63.298	ENSACIG00000018956	exosc1	92	63.298	Amphilophus_citrinellus
ENSUMAG00000022002	EXOSC1	98	64.398	ENSAOCG00000010699	exosc1	98	64.398	Amphiprion_ocellaris
ENSUMAG00000022002	EXOSC1	91	62.874	ENSAPEG00000012690	exosc1	96	62.874	Amphiprion_percula
ENSUMAG00000022002	EXOSC1	98	67.045	ENSATEG00000018683	exosc1	98	67.045	Anabas_testudineus
ENSUMAG00000022002	EXOSC1	99	70.984	ENSACAG00000002101	EXOSC1	99	70.984	Anolis_carolinensis
ENSUMAG00000022002	EXOSC1	100	84.358	ENSANAG00000034669	EXOSC1	100	84.358	Aotus_nancymaae
ENSUMAG00000022002	EXOSC1	97	67.241	ENSACLG00000021243	exosc1	97	67.241	Astatotilapia_calliptera
ENSUMAG00000022002	EXOSC1	98	68.750	ENSAMXG00000011116	exosc1	98	68.750	Astyanax_mexicanus
ENSUMAG00000022002	EXOSC1	100	84.456	ENSBTAG00000012699	EXOSC1	100	84.456	Bos_taurus
ENSUMAG00000022002	EXOSC1	91	30.102	WBGene00012966	exos-1	90	30.102	Caenorhabditis_elegans
ENSUMAG00000022002	EXOSC1	100	84.358	ENSCJAG00000016586	EXOSC1	100	84.358	Callithrix_jacchus
ENSUMAG00000022002	EXOSC1	100	82.564	ENSCAFG00000009068	EXOSC1	94	82.564	Canis_familiaris
ENSUMAG00000022002	EXOSC1	100	82.564	ENSCAFG00020006002	EXOSC1	94	82.564	Canis_lupus_dingo
ENSUMAG00000022002	EXOSC1	100	82.564	ENSCHIG00000015253	EXOSC1	100	82.564	Capra_hircus
ENSUMAG00000022002	EXOSC1	100	83.333	ENSTSYG00000000760	EXOSC1	100	83.333	Carlito_syrichta
ENSUMAG00000022002	EXOSC1	100	83.799	ENSCPOG00000001173	EXOSC1	100	83.799	Cavia_porcellus
ENSUMAG00000022002	EXOSC1	100	59.740	ENSCCAG00000023986	EXOSC1	100	59.740	Cebus_capucinus
ENSUMAG00000022002	EXOSC1	100	83.240	ENSCATG00000034114	EXOSC1	100	83.240	Cercocebus_atys
ENSUMAG00000022002	EXOSC1	100	84.358	ENSCLAG00000002463	EXOSC1	100	84.358	Chinchilla_lanigera
ENSUMAG00000022002	EXOSC1	100	80.513	ENSCSAG00000005870	EXOSC1	100	80.513	Chlorocebus_sabaeus
ENSUMAG00000022002	EXOSC1	96	68.817	ENSCHOG00000006477	EXOSC1	100	68.817	Choloepus_hoffmanni
ENSUMAG00000022002	EXOSC1	95	47.059	ENSCING00000022734	-	89	47.059	Ciona_intestinalis
ENSUMAG00000022002	EXOSC1	95	49.198	ENSCSAVG00000010865	-	95	49.198	Ciona_savignyi
ENSUMAG00000022002	EXOSC1	100	83.240	ENSCANG00000034159	EXOSC1	100	83.240	Colobus_angolensis_palliatus
ENSUMAG00000022002	EXOSC1	100	83.974	ENSCGRG00001000335	Exosc1	100	83.974	Cricetulus_griseus_chok1gshd
ENSUMAG00000022002	EXOSC1	100	83.974	ENSCGRG00000011602	Exosc1	100	83.974	Cricetulus_griseus_crigri
ENSUMAG00000022002	EXOSC1	97	59.639	ENSCSEG00000007895	exosc1	95	59.639	Cynoglossus_semilaevis
ENSUMAG00000022002	EXOSC1	98	61.780	ENSCVAG00000016748	exosc1	98	61.780	Cyprinodon_variegatus
ENSUMAG00000022002	EXOSC1	98	65.445	ENSDARG00000059841	exosc1	98	65.445	Danio_rerio
ENSUMAG00000022002	EXOSC1	73	76.351	ENSDNOG00000007983	EXOSC1	100	76.351	Dasypus_novemcinctus
ENSUMAG00000022002	EXOSC1	100	83.240	ENSDORG00000016528	Exosc1	100	83.240	Dipodomys_ordii
ENSUMAG00000022002	EXOSC1	94	39.683	FBgn0032346	Csl4	92	39.683	Drosophila_melanogaster
ENSUMAG00000022002	EXOSC1	100	80.513	ENSETEG00000002469	-	100	80.513	Echinops_telfairi
ENSUMAG00000022002	EXOSC1	97	52.332	ENSEBUG00000008164	exosc1	97	52.332	Eptatretus_burgeri
ENSUMAG00000022002	EXOSC1	100	72.821	ENSEASG00005008684	EXOSC1	100	72.821	Equus_asinus_asinus
ENSUMAG00000022002	EXOSC1	100	81.026	ENSEEUG00000005647	EXOSC1	100	81.026	Erinaceus_europaeus
ENSUMAG00000022002	EXOSC1	97	62.424	ENSELUG00000017369	exosc1	97	62.424	Esox_lucius
ENSUMAG00000022002	EXOSC1	100	83.077	ENSFCAG00000040563	EXOSC1	100	80.663	Felis_catus
ENSUMAG00000022002	EXOSC1	100	68.205	ENSFALG00000008450	EXOSC1	100	68.205	Ficedula_albicollis
ENSUMAG00000022002	EXOSC1	100	83.077	ENSFDAG00000000846	EXOSC1	100	83.077	Fukomys_damarensis
ENSUMAG00000022002	EXOSC1	98	61.780	ENSFHEG00000009154	exosc1	98	61.780	Fundulus_heteroclitus
ENSUMAG00000022002	EXOSC1	98	64.398	ENSGMOG00000008993	exosc1	98	64.398	Gadus_morhua
ENSUMAG00000022002	EXOSC1	100	67.059	ENSGALG00000039917	EXOSC1	100	67.059	Gallus_gallus
ENSUMAG00000022002	EXOSC1	98	61.458	ENSGAFG00000010265	exosc1	94	61.458	Gambusia_affinis
ENSUMAG00000022002	EXOSC1	98	64.921	ENSGACG00000018936	exosc1	98	64.921	Gasterosteus_aculeatus
ENSUMAG00000022002	EXOSC1	100	70.256	ENSGAGG00000019192	EXOSC1	100	70.256	Gopherus_agassizii
ENSUMAG00000022002	EXOSC1	100	78.824	ENSGGOG00000003099	EXOSC1	100	78.824	Gorilla_gorilla
ENSUMAG00000022002	EXOSC1	98	64.398	ENSHBUG00000017857	exosc1	98	64.398	Haplochromis_burtoni
ENSUMAG00000022002	EXOSC1	100	85.475	ENSHGLG00000016927	EXOSC1	100	85.475	Heterocephalus_glaber_female
ENSUMAG00000022002	EXOSC1	100	85.475	ENSHGLG00100012208	EXOSC1	100	85.475	Heterocephalus_glaber_male
ENSUMAG00000022002	EXOSC1	98	63.351	ENSHCOG00000019882	exosc1	98	63.351	Hippocampus_comes
ENSUMAG00000022002	EXOSC1	99	66.102	ENSIPUG00000007685	exosc1	99	66.102	Ictalurus_punctatus
ENSUMAG00000022002	EXOSC1	100	84.516	ENSSTOG00000006615	EXOSC1	100	84.516	Ictidomys_tridecemlineatus
ENSUMAG00000022002	EXOSC1	100	82.051	ENSJJAG00000013311	Exosc1	100	82.051	Jaculus_jaculus
ENSUMAG00000022002	EXOSC1	98	64.062	ENSKMAG00000001202	exosc1	81	64.062	Kryptolebias_marmoratus
ENSUMAG00000022002	EXOSC1	98	68.000	ENSLBEG00000011448	exosc1	98	68.000	Labrus_bergylta
ENSUMAG00000022002	EXOSC1	98	65.823	ENSLOCG00000003776	exosc1	99	65.823	Lepisosteus_oculatus
ENSUMAG00000022002	EXOSC1	100	82.051	ENSLAFG00000015983	EXOSC1	100	82.051	Loxodonta_africana
ENSUMAG00000022002	EXOSC1	100	83.240	ENSMFAG00000001493	EXOSC1	100	83.240	Macaca_fascicularis
ENSUMAG00000022002	EXOSC1	100	83.240	ENSMMUG00000020028	EXOSC1	100	83.240	Macaca_mulatta
ENSUMAG00000022002	EXOSC1	100	81.026	ENSMNEG00000029816	EXOSC1	100	81.026	Macaca_nemestrina
ENSUMAG00000022002	EXOSC1	100	83.240	ENSMLEG00000027643	EXOSC1	100	83.240	Mandrillus_leucophaeus
ENSUMAG00000022002	EXOSC1	98	64.583	ENSMAMG00000012200	exosc1	99	64.583	Mastacembelus_armatus
ENSUMAG00000022002	EXOSC1	97	67.241	ENSMZEG00005007042	exosc1	97	67.241	Maylandia_zebra
ENSUMAG00000022002	EXOSC1	100	80.000	ENSMAUG00000020462	-	100	80.000	Mesocricetus_auratus
ENSUMAG00000022002	EXOSC1	100	83.799	ENSMICG00000007664	EXOSC1	100	83.799	Microcebus_murinus
ENSUMAG00000022002	EXOSC1	100	83.974	ENSMOCG00000006004	-	100	83.974	Microtus_ochrogaster
ENSUMAG00000022002	EXOSC1	97	82.065	ENSMOCG00000017124	-	97	82.065	Microtus_ochrogaster
ENSUMAG00000022002	EXOSC1	99	65.730	ENSMMOG00000021403	exosc1	99	65.730	Mola_mola
ENSUMAG00000022002	EXOSC1	100	76.531	ENSMODG00000004213	EXOSC1	100	76.531	Monodelphis_domestica
ENSUMAG00000022002	EXOSC1	94	64.130	ENSMALG00000007061	exosc1	92	64.130	Monopterus_albus
ENSUMAG00000022002	EXOSC1	100	84.615	MGP_CAROLIEiJ_G0022959	Exosc1	100	84.615	Mus_caroli
ENSUMAG00000022002	EXOSC1	100	83.974	ENSMUSG00000034321	Exosc1	100	83.974	Mus_musculus
ENSUMAG00000022002	EXOSC1	100	83.974	MGP_PahariEiJ_G0014449	Exosc1	100	83.974	Mus_pahari
ENSUMAG00000022002	EXOSC1	100	84.615	MGP_SPRETEiJ_G0023880	Exosc1	100	84.615	Mus_spretus
ENSUMAG00000022002	EXOSC1	100	83.077	ENSMPUG00000017044	EXOSC1	100	83.077	Mustela_putorius_furo
ENSUMAG00000022002	EXOSC1	100	81.538	ENSMLUG00000009228	EXOSC1	100	81.538	Myotis_lucifugus
ENSUMAG00000022002	EXOSC1	100	80.513	ENSNGAG00000022033	Exosc1	100	80.513	Nannospalax_galili
ENSUMAG00000022002	EXOSC1	98	67.045	ENSNBRG00000024007	exosc1	98	67.045	Neolamprologus_brichardi
ENSUMAG00000022002	EXOSC1	100	83.240	ENSNLEG00000013872	EXOSC1	100	83.240	Nomascus_leucogenys
ENSUMAG00000022002	EXOSC1	100	81.538	ENSOPRG00000005065	EXOSC1	100	81.538	Ochotona_princeps
ENSUMAG00000022002	EXOSC1	100	84.916	ENSODEG00000016709	EXOSC1	100	84.916	Octodon_degus
ENSUMAG00000022002	EXOSC1	98	64.398	ENSONIG00000017683	exosc1	98	64.398	Oreochromis_niloticus
ENSUMAG00000022002	EXOSC1	53	91.358	ENSOANG00000006563	EXOSC1	64	91.358	Ornithorhynchus_anatinus
ENSUMAG00000022002	EXOSC1	100	76.263	ENSOCUG00000026461	-	100	76.263	Oryctolagus_cuniculus
ENSUMAG00000022002	EXOSC1	100	80.612	ENSOCUG00000011898	-	100	80.612	Oryctolagus_cuniculus
ENSUMAG00000022002	EXOSC1	98	63.542	ENSORLG00000011595	exosc1	98	63.542	Oryzias_latipes
ENSUMAG00000022002	EXOSC1	98	63.542	ENSORLG00020005831	exosc1	98	63.542	Oryzias_latipes_hni
ENSUMAG00000022002	EXOSC1	98	63.542	ENSORLG00015004317	exosc1	98	63.542	Oryzias_latipes_hsok
ENSUMAG00000022002	EXOSC1	98	68.000	ENSOMEG00000013907	exosc1	98	68.000	Oryzias_melastigma
ENSUMAG00000022002	EXOSC1	100	81.026	ENSOGAG00000016259	EXOSC1	100	81.026	Otolemur_garnettii
ENSUMAG00000022002	EXOSC1	100	82.564	ENSOARG00000010136	EXOSC1	100	82.564	Ovis_aries
ENSUMAG00000022002	EXOSC1	100	83.249	ENSPPAG00000039842	EXOSC1	100	83.249	Pan_paniscus
ENSUMAG00000022002	EXOSC1	100	83.077	ENSPPRG00000023366	EXOSC1	100	83.077	Panthera_pardus
ENSUMAG00000022002	EXOSC1	100	83.077	ENSPTIG00000017701	EXOSC1	100	83.077	Panthera_tigris_altaica
ENSUMAG00000022002	EXOSC1	100	83.240	ENSPTRG00000002808	EXOSC1	100	83.240	Pan_troglodytes
ENSUMAG00000022002	EXOSC1	100	83.240	ENSPANG00000021324	EXOSC1	100	83.240	Papio_anubis
ENSUMAG00000022002	EXOSC1	98	65.445	ENSPKIG00000016037	exosc1	98	65.445	Paramormyrops_kingsleyae
ENSUMAG00000022002	EXOSC1	53	90.123	ENSPSIG00000013571	EXOSC1	65	90.123	Pelodiscus_sinensis
ENSUMAG00000022002	EXOSC1	97	59.036	ENSPMGG00000014002	exosc1	98	59.036	Periophthalmus_magnuspinnatus
ENSUMAG00000022002	EXOSC1	100	83.974	ENSPEMG00000010710	-	100	83.974	Peromyscus_maniculatus_bairdii
ENSUMAG00000022002	EXOSC1	95	56.150	ENSPMAG00000000195	exosc1	95	56.150	Petromyzon_marinus
ENSUMAG00000022002	EXOSC1	100	77.436	ENSPCIG00000002210	EXOSC1	99	77.436	Phascolarctos_cinereus
ENSUMAG00000022002	EXOSC1	98	60.938	ENSPFOG00000006755	exosc1	94	60.938	Poecilia_formosa
ENSUMAG00000022002	EXOSC1	98	61.257	ENSPLAG00000005880	exosc1	98	61.257	Poecilia_latipinna
ENSUMAG00000022002	EXOSC1	98	60.938	ENSPMEG00000015598	exosc1	94	60.938	Poecilia_mexicana
ENSUMAG00000022002	EXOSC1	98	57.485	ENSPREG00000000405	exosc1	93	57.485	Poecilia_reticulata
ENSUMAG00000022002	EXOSC1	100	80.513	ENSPPYG00000002531	EXOSC1	100	80.513	Pongo_abelii
ENSUMAG00000022002	EXOSC1	100	81.026	ENSPCAG00000009135	EXOSC1	100	81.026	Procavia_capensis
ENSUMAG00000022002	EXOSC1	100	86.885	ENSPCOG00000027539	EXOSC1	100	86.885	Propithecus_coquereli
ENSUMAG00000022002	EXOSC1	100	82.051	ENSPVAG00000003372	EXOSC1	100	82.051	Pteropus_vampyrus
ENSUMAG00000022002	EXOSC1	98	64.398	ENSPNYG00000021745	exosc1	98	64.398	Pundamilia_nyererei
ENSUMAG00000022002	EXOSC1	98	64.921	ENSPNAG00000001944	exosc1	98	64.921	Pygocentrus_nattereri
ENSUMAG00000022002	EXOSC1	100	83.974	ENSRNOG00000048708	Exosc1	100	83.974	Rattus_norvegicus
ENSUMAG00000022002	EXOSC1	100	83.240	ENSRBIG00000035618	EXOSC1	100	83.240	Rhinopithecus_bieti
ENSUMAG00000022002	EXOSC1	100	83.240	ENSRROG00000032589	EXOSC1	100	83.240	Rhinopithecus_roxellana
ENSUMAG00000022002	EXOSC1	100	82.051	ENSSBOG00000000359	EXOSC1	100	82.051	Saimiri_boliviensis_boliviensis
ENSUMAG00000022002	EXOSC1	53	96.341	ENSSHAG00000018219	EXOSC1	100	74.150	Sarcophilus_harrisii
ENSUMAG00000022002	EXOSC1	98	66.667	ENSSFOG00015009069	exosc1	99	66.667	Scleropages_formosus
ENSUMAG00000022002	EXOSC1	97	64.211	ENSSFOG00015016289	-	98	64.211	Scleropages_formosus
ENSUMAG00000022002	EXOSC1	98	67.614	ENSSMAG00000003721	exosc1	98	67.614	Scophthalmus_maximus
ENSUMAG00000022002	EXOSC1	98	64.921	ENSSDUG00000002993	exosc1	98	64.921	Seriola_dumerili
ENSUMAG00000022002	EXOSC1	98	64.921	ENSSLDG00000025181	exosc1	98	64.921	Seriola_lalandi_dorsalis
ENSUMAG00000022002	EXOSC1	100	67.179	ENSSARG00000000162	EXOSC1	100	67.179	Sorex_araneus
ENSUMAG00000022002	EXOSC1	99	69.388	ENSSPUG00000012263	EXOSC1	99	69.388	Sphenodon_punctatus
ENSUMAG00000022002	EXOSC1	98	62.147	ENSSPAG00000016792	exosc1	82	62.147	Stegastes_partitus
ENSUMAG00000022002	EXOSC1	100	82.051	ENSSSCG00000010518	EXOSC1	91	82.051	Sus_scrofa
ENSUMAG00000022002	EXOSC1	98	65.625	ENSTGUG00000009692	EXOSC1	99	65.625	Taeniopygia_guttata
ENSUMAG00000022002	EXOSC1	97	59.259	ENSTRUG00000007706	exosc1	98	59.259	Takifugu_rubripes
ENSUMAG00000022002	EXOSC1	97	58.333	ENSTNIG00000014079	exosc1	97	58.333	Tetraodon_nigroviridis
ENSUMAG00000022002	EXOSC1	100	73.333	ENSTBEG00000006011	EXOSC1	100	73.333	Tupaia_belangeri
ENSUMAG00000022002	EXOSC1	94	82.065	ENSTTRG00000009887	EXOSC1	100	82.065	Tursiops_truncatus
ENSUMAG00000022002	EXOSC1	100	99.441	ENSUAMG00000010266	EXOSC1	100	99.441	Ursus_americanus
ENSUMAG00000022002	EXOSC1	100	82.564	ENSVVUG00000023192	EXOSC1	63	82.564	Vulpes_vulpes
ENSUMAG00000022002	EXOSC1	98	66.667	ENSXETG00000003434	exosc1	99	66.667	Xenopus_tropicalis
ENSUMAG00000022002	EXOSC1	52	83.750	ENSXCOG00000014499	exosc1	62	83.750	Xiphophorus_couchianus
ENSUMAG00000022002	EXOSC1	98	57.485	ENSXMAG00000023382	exosc1	93	57.485	Xiphophorus_maculatus