EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000023567 (Gene tree)
Gene ID: 103659103
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 41010 bases
Position: chrKK498509.1:6803862-6844871
Accession: 13408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000032793	Suf	PF05843.14	2.1e-10	1	1
ENSUMAP00000032795	Suf	PF05843.14	2.1e-10	1	1
ENSUMAP00000032800	Suf	PF05843.14	2.1e-10	1	1
ENSUMAP00000032787	Suf	PF05843.14	2.1e-10	1	1
ENSUMAP00000032787	S1	PF00575.23	2.7e-66	1	5
ENSUMAP00000032787	S1	PF00575.23	2.7e-66	2	5
ENSUMAP00000032787	S1	PF00575.23	2.7e-66	3	5
ENSUMAP00000032787	S1	PF00575.23	2.7e-66	4	5
ENSUMAP00000032787	S1	PF00575.23	2.7e-66	5	5
ENSUMAP00000032793	S1	PF00575.23	6.2e-66	1	5
ENSUMAP00000032793	S1	PF00575.23	6.2e-66	2	5
ENSUMAP00000032793	S1	PF00575.23	6.2e-66	3	5
ENSUMAP00000032793	S1	PF00575.23	6.2e-66	4	5
ENSUMAP00000032793	S1	PF00575.23	6.2e-66	5	5
ENSUMAP00000032795	S1	PF00575.23	8e-66	1	5
ENSUMAP00000032795	S1	PF00575.23	8e-66	2	5
ENSUMAP00000032795	S1	PF00575.23	8e-66	3	5
ENSUMAP00000032795	S1	PF00575.23	8e-66	4	5
ENSUMAP00000032795	S1	PF00575.23	8e-66	5	5
ENSUMAP00000032800	S1	PF00575.23	5e-65	1	5
ENSUMAP00000032800	S1	PF00575.23	5e-65	2	5
ENSUMAP00000032800	S1	PF00575.23	5e-65	3	5
ENSUMAP00000032800	S1	PF00575.23	5e-65	4	5
ENSUMAP00000032800	S1	PF00575.23	5e-65	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000038784	PDCD11-203	5529	-	ENSUMAP00000032795	1842 (aa)	-	-
ENSUMAT00000038776	PDCD11-201	5601	-	ENSUMAP00000032787	1866 (aa)	-	-
ENSUMAT00000038791	PDCD11-204	5571	-	ENSUMAP00000032800	1856 (aa)	-	-
ENSUMAT00000038782	PDCD11-202	5529	-	ENSUMAP00000032793	1842 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000023567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000023567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000023567	PDCD11	100	86.458	ENSG00000148843	PDCD11	100	86.139	Homo_sapiens
ENSUMAG00000023567	PDCD11	99	43.896	ENSAPOG00000015629	pdcd11	99	43.873	Acanthochromis_polyacanthus
ENSUMAG00000023567	PDCD11	99	95.370	ENSAMEG00000017935	PDCD11	99	95.370	Ailuropoda_melanoleuca
ENSUMAG00000023567	PDCD11	50	41.056	ENSACIG00000006458	-	98	42.151	Amphilophus_citrinellus
ENSUMAG00000023567	PDCD11	99	43.996	ENSAOCG00000015287	pdcd11	99	43.724	Amphiprion_ocellaris
ENSUMAG00000023567	PDCD11	60	42.173	ENSAPEG00000020240	pdcd11	98	41.974	Amphiprion_percula
ENSUMAG00000023567	PDCD11	95	61.376	ENSATEG00000021043	pdcd11	99	43.783	Anabas_testudineus
ENSUMAG00000023567	PDCD11	99	54.213	ENSAPLG00000010301	PDCD11	99	54.083	Anas_platyrhynchos
ENSUMAG00000023567	PDCD11	99	53.248	ENSACAG00000004796	PDCD11	99	53.135	Anolis_carolinensis
ENSUMAG00000023567	PDCD11	99	85.691	ENSANAG00000034576	PDCD11	99	85.372	Aotus_nancymaae
ENSUMAG00000023567	PDCD11	91	65.436	ENSACLG00000018236	pdcd11	99	61.095	Astatotilapia_calliptera
ENSUMAG00000023567	PDCD11	99	39.827	ENSAMXG00000005458	pdcd11	96	45.341	Astyanax_mexicanus
ENSUMAG00000023567	PDCD11	100	85.016	ENSBTAG00000009715	PDCD11	100	84.910	Bos_taurus
ENSUMAG00000023567	PDCD11	99	85.152	ENSCJAG00000018257	PDCD11	99	84.939	Callithrix_jacchus
ENSUMAG00000023567	PDCD11	99	92.160	ENSCAFG00000010411	PDCD11	99	92.000	Canis_familiaris
ENSUMAG00000023567	PDCD11	100	91.862	ENSCAFG00020010369	PDCD11	99	91.702	Canis_lupus_dingo
ENSUMAG00000023567	PDCD11	99	84.423	ENSCHIG00000025218	PDCD11	100	84.423	Capra_hircus
ENSUMAG00000023567	PDCD11	98	75.746	ENSTSYG00000033423	PDCD11	100	75.583	Carlito_syrichta
ENSUMAG00000023567	PDCD11	91	69.493	ENSCAPG00000005386	PDCD11	99	69.171	Cavia_aperea
ENSUMAG00000023567	PDCD11	100	78.526	ENSCPOG00000010957	PDCD11	99	79.933	Cavia_porcellus
ENSUMAG00000023567	PDCD11	99	85.471	ENSCCAG00000018950	PDCD11	99	85.098	Cebus_capucinus
ENSUMAG00000023567	PDCD11	100	86.730	ENSCATG00000044331	PDCD11	100	86.412	Cercocebus_atys
ENSUMAG00000023567	PDCD11	100	79.449	ENSCLAG00000001029	PDCD11	100	79.396	Chinchilla_lanigera
ENSUMAG00000023567	PDCD11	100	86.610	ENSCSAG00000005346	PDCD11	100	86.291	Chlorocebus_sabaeus
ENSUMAG00000023567	PDCD11	85	99.225	ENSCHOG00000004796	PDCD11	90	99.225	Choloepus_hoffmanni
ENSUMAG00000023567	PDCD11	91	71.935	ENSCPBG00000024487	PDCD11	99	75.931	Chrysemys_picta_bellii
ENSUMAG00000023567	PDCD11	93	39.514	ENSCING00000002715	-	99	36.709	Ciona_intestinalis
ENSUMAG00000023567	PDCD11	100	86.185	ENSCANG00000043300	PDCD11	100	86.185	Colobus_angolensis_palliatus
ENSUMAG00000023567	PDCD11	100	78.822	ENSCGRG00001006458	Pdcd11	100	78.662	Cricetulus_griseus_chok1gshd
ENSUMAG00000023567	PDCD11	100	78.822	ENSCGRG00000003583	Pdcd11	100	78.662	Cricetulus_griseus_crigri
ENSUMAG00000023567	PDCD11	94	56.497	ENSCSEG00000010739	pdcd11	99	43.043	Cynoglossus_semilaevis
ENSUMAG00000023567	PDCD11	94	64.035	ENSCVAG00000018903	pdcd11	99	58.000	Cyprinodon_variegatus
ENSUMAG00000023567	PDCD11	99	42.541	ENSDARG00000052480	pdcd11	99	42.624	Danio_rerio
ENSUMAG00000023567	PDCD11	100	84.526	ENSDNOG00000013838	PDCD11	100	84.261	Dasypus_novemcinctus
ENSUMAG00000023567	PDCD11	100	80.244	ENSDORG00000010420	Pdcd11	100	80.679	Dipodomys_ordii
ENSUMAG00000023567	PDCD11	61	38.924	FBgn0039182	CG5728	76	38.924	Drosophila_melanogaster
ENSUMAG00000023567	PDCD11	95	72.275	ENSETEG00000000813	PDCD11	100	72.107	Echinops_telfairi
ENSUMAG00000023567	PDCD11	66	53.767	ENSEBUG00000002358	-	93	53.767	Eptatretus_burgeri
ENSUMAG00000023567	PDCD11	96	90.095	ENSEASG00005015159	PDCD11	100	89.872	Equus_asinus_asinus
ENSUMAG00000023567	PDCD11	100	89.793	ENSECAG00000020507	PDCD11	100	89.686	Equus_caballus
ENSUMAG00000023567	PDCD11	98	86.000	ENSEEUG00000009245	PDCD11	91	86.000	Erinaceus_europaeus
ENSUMAG00000023567	PDCD11	94	63.037	ENSELUG00000004211	pdcd11	99	44.338	Esox_lucius
ENSUMAG00000023567	PDCD11	99	91.485	ENSFCAG00000002384	PDCD11	99	91.538	Felis_catus
ENSUMAG00000023567	PDCD11	99	54.502	ENSFALG00000008775	PDCD11	99	54.478	Ficedula_albicollis
ENSUMAG00000023567	PDCD11	100	78.677	ENSFDAG00000009532	PDCD11	100	78.466	Fukomys_damarensis
ENSUMAG00000023567	PDCD11	90	67.568	ENSFHEG00000022997	pdcd11	98	67.568	Fundulus_heteroclitus
ENSUMAG00000023567	PDCD11	88	57.143	ENSGMOG00000004186	pdcd11	92	57.364	Gadus_morhua
ENSUMAG00000023567	PDCD11	75	53.268	ENSGALG00000008265	PDCD11	97	53.184	Gallus_gallus
ENSUMAG00000023567	PDCD11	99	43.440	ENSGAFG00000012806	pdcd11	99	48.547	Gambusia_affinis
ENSUMAG00000023567	PDCD11	99	43.453	ENSGACG00000018233	pdcd11	96	60.105	Gasterosteus_aculeatus
ENSUMAG00000023567	PDCD11	96	57.737	ENSGAGG00000024314	PDCD11	99	58.450	Gopherus_agassizii
ENSUMAG00000023567	PDCD11	100	86.132	ENSGGOG00000011621	PDCD11	100	85.813	Gorilla_gorilla
ENSUMAG00000023567	PDCD11	95	61.478	ENSHBUG00000020226	pdcd11	99	43.328	Haplochromis_burtoni
ENSUMAG00000023567	PDCD11	100	79.766	ENSHGLG00000001462	PDCD11	100	79.395	Heterocephalus_glaber_female
ENSUMAG00000023567	PDCD11	100	79.129	ENSHGLG00100018779	PDCD11	100	78.757	Heterocephalus_glaber_male
ENSUMAG00000023567	PDCD11	99	42.586	ENSHCOG00000016006	pdcd11	99	42.549	Hippocampus_comes
ENSUMAG00000023567	PDCD11	63	40.550	ENSIPUG00000015102	pdcd11	99	41.387	Ictalurus_punctatus
ENSUMAG00000023567	PDCD11	100	82.706	ENSSTOG00000014553	PDCD11	100	82.397	Ictidomys_tridecemlineatus
ENSUMAG00000023567	PDCD11	100	81.306	ENSJJAG00000015523	Pdcd11	100	81.360	Jaculus_jaculus
ENSUMAG00000023567	PDCD11	50	41.068	ENSKMAG00000021182	pdcd11	98	40.696	Kryptolebias_marmoratus
ENSUMAG00000023567	PDCD11	99	48.109	ENSLOCG00000011818	pdcd11	99	48.269	Lepisosteus_oculatus
ENSUMAG00000023567	PDCD11	100	84.183	ENSLAFG00000008398	PDCD11	100	84.130	Loxodonta_africana
ENSUMAG00000023567	PDCD11	100	86.769	ENSMFAG00000044058	PDCD11	100	86.504	Macaca_fascicularis
ENSUMAG00000023567	PDCD11	100	86.769	ENSMMUG00000007058	PDCD11	100	86.504	Macaca_mulatta
ENSUMAG00000023567	PDCD11	100	86.716	ENSMNEG00000040726	PDCD11	99	86.451	Macaca_nemestrina
ENSUMAG00000023567	PDCD11	100	85.388	ENSMLEG00000040978	PDCD11	100	85.069	Mandrillus_leucophaeus
ENSUMAG00000023567	PDCD11	99	43.161	ENSMAMG00000009572	pdcd11	99	43.090	Mastacembelus_armatus
ENSUMAG00000023567	PDCD11	95	61.478	ENSMZEG00005008949	pdcd11	99	43.381	Maylandia_zebra
ENSUMAG00000023567	PDCD11	99	54.747	ENSMGAG00000010482	PDCD11	99	54.714	Meleagris_gallopavo
ENSUMAG00000023567	PDCD11	100	76.781	ENSMAUG00000014924	Pdcd11	100	76.649	Mesocricetus_auratus
ENSUMAG00000023567	PDCD11	100	85.661	ENSMICG00000012421	PDCD11	100	85.343	Microcebus_murinus
ENSUMAG00000023567	PDCD11	100	78.503	ENSMOCG00000021792	Pdcd11	100	78.185	Microtus_ochrogaster
ENSUMAG00000023567	PDCD11	99	38.562	ENSMMOG00000007572	pdcd11	97	42.516	Mola_mola
ENSUMAG00000023567	PDCD11	99	63.446	ENSMODG00000011077	PDCD11	99	63.592	Monodelphis_domestica
ENSUMAG00000023567	PDCD11	99	58.112	ENSMALG00000003859	pdcd11	92	58.112	Monopterus_albus
ENSUMAG00000023567	PDCD11	100	76.891	MGP_CAROLIEiJ_G0023050	Pdcd11	100	76.996	Mus_caroli
ENSUMAG00000023567	PDCD11	100	76.822	ENSMUSG00000025047	Pdcd11	100	76.756	Mus_musculus
ENSUMAG00000023567	PDCD11	100	77.696	MGP_PahariEiJ_G0014540	Pdcd11	100	77.801	Mus_pahari
ENSUMAG00000023567	PDCD11	100	76.838	MGP_SPRETEiJ_G0023971	Pdcd11	100	76.838	Mus_spretus
ENSUMAG00000023567	PDCD11	99	92.213	ENSMPUG00000016829	PDCD11	99	92.213	Mustela_putorius_furo
ENSUMAG00000023567	PDCD11	100	88.191	ENSMLUG00000004997	PDCD11	100	88.191	Myotis_lucifugus
ENSUMAG00000023567	PDCD11	100	81.891	ENSNGAG00000018143	Pdcd11	100	81.784	Nannospalax_galili
ENSUMAG00000023567	PDCD11	84	57.612	ENSNBRG00000021596	pdcd11	99	56.022	Neolamprologus_brichardi
ENSUMAG00000023567	PDCD11	100	82.997	ENSNLEG00000026700	PDCD11	100	82.678	Nomascus_leucogenys
ENSUMAG00000023567	PDCD11	71	81.659	ENSMEUG00000013719	-	71	81.659	Notamacropus_eugenii
ENSUMAG00000023567	PDCD11	100	78.640	ENSOPRG00000010593	PDCD11	100	78.480	Ochotona_princeps
ENSUMAG00000023567	PDCD11	100	77.842	ENSODEG00000008079	PDCD11	99	77.789	Octodon_degus
ENSUMAG00000023567	PDCD11	95	60.950	ENSONIG00000018835	pdcd11	99	43.249	Oreochromis_niloticus
ENSUMAG00000023567	PDCD11	99	59.197	ENSOANG00000001636	-	99	59.187	Ornithorhynchus_anatinus
ENSUMAG00000023567	PDCD11	100	84.607	ENSOCUG00000006312	PDCD11	100	84.448	Oryctolagus_cuniculus
ENSUMAG00000023567	PDCD11	99	43.061	ENSORLG00020003642	pdcd11	99	43.091	Oryzias_latipes_hni
ENSUMAG00000023567	PDCD11	99	42.963	ENSORLG00015001618	pdcd11	99	43.165	Oryzias_latipes_hsok
ENSUMAG00000023567	PDCD11	74	43.235	ENSOMEG00000010904	pdcd11	98	43.275	Oryzias_melastigma
ENSUMAG00000023567	PDCD11	100	83.879	ENSOGAG00000008683	PDCD11	100	83.721	Otolemur_garnettii
ENSUMAG00000023567	PDCD11	99	84.157	ENSOARG00000003719	PDCD11	100	84.157	Ovis_aries
ENSUMAG00000023567	PDCD11	100	84.973	ENSPPAG00000024593	PDCD11	100	84.574	Pan_paniscus
ENSUMAG00000023567	PDCD11	99	91.698	ENSPPRG00000015133	PDCD11	99	91.751	Panthera_pardus
ENSUMAG00000023567	PDCD11	99	91.591	ENSPTIG00000011433	PDCD11	99	91.644	Panthera_tigris_altaica
ENSUMAG00000023567	PDCD11	100	86.291	ENSPTRG00000002911	PDCD11	100	85.972	Pan_troglodytes
ENSUMAG00000023567	PDCD11	100	86.663	ENSPANG00000020959	PDCD11	100	86.344	Papio_anubis
ENSUMAG00000023567	PDCD11	99	45.469	ENSPKIG00000000973	pdcd11	99	45.180	Paramormyrops_kingsleyae
ENSUMAG00000023567	PDCD11	76	57.014	ENSPSIG00000005102	PDCD11	93	57.597	Pelodiscus_sinensis
ENSUMAG00000023567	PDCD11	76	62.939	ENSPMGG00000007289	pdcd11	90	62.939	Periophthalmus_magnuspinnatus
ENSUMAG00000023567	PDCD11	100	78.386	ENSPEMG00000010315	Pdcd11	100	78.651	Peromyscus_maniculatus_bairdii
ENSUMAG00000023567	PDCD11	99	41.434	ENSPMAG00000003098	pdcd11	99	41.592	Petromyzon_marinus
ENSUMAG00000023567	PDCD11	100	66.631	ENSPCIG00000001118	PDCD11	100	66.579	Phascolarctos_cinereus
ENSUMAG00000023567	PDCD11	99	43.886	ENSPFOG00000006012	pdcd11	99	44.144	Poecilia_formosa
ENSUMAG00000023567	PDCD11	99	41.430	ENSPLAG00000014494	pdcd11	99	41.684	Poecilia_latipinna
ENSUMAG00000023567	PDCD11	88	53.162	ENSPMEG00000018177	pdcd11	93	53.831	Poecilia_mexicana
ENSUMAG00000023567	PDCD11	99	43.605	ENSPREG00000000475	pdcd11	99	43.697	Poecilia_reticulata
ENSUMAG00000023567	PDCD11	100	84.665	ENSPPYG00000002621	PDCD11	100	84.237	Pongo_abelii
ENSUMAG00000023567	PDCD11	85	85.376	ENSPCAG00000011663	PDCD11	71	83.430	Procavia_capensis
ENSUMAG00000023567	PDCD11	100	79.644	ENSPCOG00000023327	PDCD11	100	79.359	Propithecus_coquereli
ENSUMAG00000023567	PDCD11	100	87.181	ENSPVAG00000004176	PDCD11	100	87.021	Pteropus_vampyrus
ENSUMAG00000023567	PDCD11	95	61.478	ENSPNYG00000003979	pdcd11	99	43.488	Pundamilia_nyererei
ENSUMAG00000023567	PDCD11	95	45.571	ENSPNAG00000017225	pdcd11	99	45.531	Pygocentrus_nattereri
ENSUMAG00000023567	PDCD11	100	77.424	ENSRNOG00000020304	Pdcd11	99	77.371	Rattus_norvegicus
ENSUMAG00000023567	PDCD11	100	86.451	ENSRBIG00000011889	PDCD11	100	86.451	Rhinopithecus_bieti
ENSUMAG00000023567	PDCD11	100	86.397	ENSRROG00000030483	PDCD11	100	86.397	Rhinopithecus_roxellana
ENSUMAG00000023567	PDCD11	88	48.327	YMR229C	-	94	42.773	Saccharomyces_cerevisiae
ENSUMAG00000023567	PDCD11	99	85.333	ENSSBOG00000030308	PDCD11	99	85.333	Saimiri_boliviensis_boliviensis
ENSUMAG00000023567	PDCD11	99	65.589	ENSSHAG00000018258	PDCD11	99	65.206	Sarcophilus_harrisii
ENSUMAG00000023567	PDCD11	99	46.064	ENSSFOG00015003881	pdcd11	99	46.039	Scleropages_formosus
ENSUMAG00000023567	PDCD11	99	43.671	ENSSMAG00000006612	pdcd11	99	43.356	Scophthalmus_maximus
ENSUMAG00000023567	PDCD11	93	50.519	ENSSDUG00000021302	pdcd11	96	50.927	Seriola_dumerili
ENSUMAG00000023567	PDCD11	77	89.286	ENSSARG00000002540	PDCD11	71	89.286	Sorex_araneus
ENSUMAG00000023567	PDCD11	97	42.295	ENSSPAG00000017558	pdcd11	100	42.429	Stegastes_partitus
ENSUMAG00000023567	PDCD11	100	85.957	ENSSSCG00000010599	PDCD11	100	86.144	Sus_scrofa
ENSUMAG00000023567	PDCD11	69	40.565	ENSTRUG00000014291	pdcd11	99	40.670	Takifugu_rubripes
ENSUMAG00000023567	PDCD11	99	43.379	ENSTNIG00000012085	pdcd11	99	43.008	Tetraodon_nigroviridis
ENSUMAG00000023567	PDCD11	100	80.106	ENSTBEG00000001893	PDCD11	100	80.160	Tupaia_belangeri
ENSUMAG00000023567	PDCD11	99	81.712	ENSTTRG00000003356	PDCD11	99	81.712	Tursiops_truncatus
ENSUMAG00000023567	PDCD11	99	97.548	ENSUAMG00000018015	PDCD11	99	97.548	Ursus_americanus
ENSUMAG00000023567	PDCD11	68	87.786	ENSVPAG00000007405	PDCD11	83	87.786	Vicugna_pacos
ENSUMAG00000023567	PDCD11	99	92.213	ENSVVUG00000004457	PDCD11	99	92.053	Vulpes_vulpes
ENSUMAG00000023567	PDCD11	99	49.021	ENSXETG00000009482	pdcd11	99	49.074	Xenopus_tropicalis
ENSUMAG00000023567	PDCD11	99	38.625	ENSXCOG00000012420	pdcd11	99	38.625	Xiphophorus_couchianus
ENSUMAG00000023567	PDCD11	99	44.116	ENSXMAG00000004638	pdcd11	99	43.786	Xiphophorus_maculatus