EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000024092 (Gene tree)
Gene ID: 103674267
Gene Symbol: TRNT1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 17773 bases
Position: chrKK498682.1:18336715-18354487
Accession: 103674267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000033413	PolyA_pol	PF01743.20	3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000039539	TRNT1-201	1311	-	ENSUMAP00000033413	436 (aa)	XP_008701380	UPI0004DFFC8E

Gene Model

Click here to download ENSUMAG00000024092's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000024092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000024092	TRNT1	99	92.396	ENSG00000072756	TRNT1	100	92.396	Homo_sapiens
ENSUMAG00000024092	TRNT1	98	66.667	ENSAPOG00000013687	trnt1	99	66.667	Acanthochromis_polyacanthus
ENSUMAG00000024092	TRNT1	99	98.624	ENSAMEG00000014520	TRNT1	100	98.624	Ailuropoda_melanoleuca
ENSUMAG00000024092	TRNT1	97	68.471	ENSACIG00000021706	trnt1	99	68.471	Amphilophus_citrinellus
ENSUMAG00000024092	TRNT1	97	67.294	ENSAOCG00000024612	trnt1	99	67.294	Amphiprion_ocellaris
ENSUMAG00000024092	TRNT1	96	60.192	ENSAPEG00000022627	trnt1	97	60.192	Amphiprion_percula
ENSUMAG00000024092	TRNT1	92	70.471	ENSATEG00000008928	trnt1	99	70.471	Anabas_testudineus
ENSUMAG00000024092	TRNT1	89	76.227	ENSAPLG00000004258	TRNT1	96	76.227	Anas_platyrhynchos
ENSUMAG00000024092	TRNT1	98	74.651	ENSACAG00000005657	TRNT1	98	74.651	Anolis_carolinensis
ENSUMAG00000024092	TRNT1	99	92.166	ENSANAG00000024802	TRNT1	100	92.166	Aotus_nancymaae
ENSUMAG00000024092	TRNT1	97	67.294	ENSACLG00000022227	trnt1	99	67.294	Astatotilapia_calliptera
ENSUMAG00000024092	TRNT1	99	67.674	ENSAMXG00000003960	trnt1	99	67.674	Astyanax_mexicanus
ENSUMAG00000024092	TRNT1	99	90.783	ENSBTAG00000019534	TRNT1	100	90.783	Bos_taurus
ENSUMAG00000024092	TRNT1	93	44.787	WBGene00010089	hpo-31	95	44.787	Caenorhabditis_elegans
ENSUMAG00000024092	TRNT1	99	92.166	ENSCJAG00000015466	TRNT1	100	92.166	Callithrix_jacchus
ENSUMAG00000024092	TRNT1	100	95.642	ENSCAFG00000005985	TRNT1	100	95.642	Canis_familiaris
ENSUMAG00000024092	TRNT1	100	95.642	ENSCAFG00020014746	TRNT1	100	95.642	Canis_lupus_dingo
ENSUMAG00000024092	TRNT1	99	90.783	ENSCHIG00000007030	TRNT1	99	90.783	Capra_hircus
ENSUMAG00000024092	TRNT1	99	92.166	ENSTSYG00000013390	TRNT1	100	92.166	Carlito_syrichta
ENSUMAG00000024092	TRNT1	87	74.406	ENSCAPG00000006891	TRNT1	100	74.406	Cavia_aperea
ENSUMAG00000024092	TRNT1	99	90.762	ENSCPOG00000007849	TRNT1	99	90.762	Cavia_porcellus
ENSUMAG00000024092	TRNT1	95	89.183	ENSCCAG00000002919	TRNT1	100	91.272	Cebus_capucinus
ENSUMAG00000024092	TRNT1	99	93.303	ENSCATG00000031985	TRNT1	99	93.303	Cercocebus_atys
ENSUMAG00000024092	TRNT1	99	90.762	ENSCLAG00000005186	TRNT1	99	90.762	Chinchilla_lanigera
ENSUMAG00000024092	TRNT1	99	93.318	ENSCSAG00000011052	TRNT1	100	93.318	Chlorocebus_sabaeus
ENSUMAG00000024092	TRNT1	84	92.079	ENSCHOG00000005712	TRNT1	85	92.079	Choloepus_hoffmanni
ENSUMAG00000024092	TRNT1	99	77.726	ENSCPBG00000017636	TRNT1	98	77.726	Chrysemys_picta_bellii
ENSUMAG00000024092	TRNT1	93	43.980	ENSCING00000007069	-	100	43.980	Ciona_intestinalis
ENSUMAG00000024092	TRNT1	97	44.706	ENSCSAVG00000007494	-	100	44.706	Ciona_savignyi
ENSUMAG00000024092	TRNT1	99	93.088	ENSCANG00000039030	TRNT1	100	93.088	Colobus_angolensis_palliatus
ENSUMAG00000024092	TRNT1	99	90.553	ENSCGRG00001009998	Trnt1	100	90.553	Cricetulus_griseus_chok1gshd
ENSUMAG00000024092	TRNT1	99	90.553	ENSCGRG00000013410	Trnt1	100	90.553	Cricetulus_griseus_crigri
ENSUMAG00000024092	TRNT1	93	68.227	ENSCSEG00000008157	trnt1	95	68.227	Cynoglossus_semilaevis
ENSUMAG00000024092	TRNT1	95	68.116	ENSCVAG00000019770	trnt1	97	68.116	Cyprinodon_variegatus
ENSUMAG00000024092	TRNT1	94	69.853	ENSDARG00000075297	trnt1	95	69.853	Danio_rerio
ENSUMAG00000024092	TRNT1	99	90.323	ENSDNOG00000008837	TRNT1	100	90.323	Dasypus_novemcinctus
ENSUMAG00000024092	TRNT1	99	89.171	ENSDORG00000014035	Trnt1	100	89.171	Dipodomys_ordii
ENSUMAG00000024092	TRNT1	92	50.000	FBgn0037369	CG2100	83	50.000	Drosophila_melanogaster
ENSUMAG00000024092	TRNT1	57	90.763	ENSETEG00000018177	TRNT1	100	90.763	Echinops_telfairi
ENSUMAG00000024092	TRNT1	92	61.787	ENSEBUG00000012779	-	95	61.787	Eptatretus_burgeri
ENSUMAG00000024092	TRNT1	99	92.857	ENSEASG00005003577	TRNT1	100	92.857	Equus_asinus_asinus
ENSUMAG00000024092	TRNT1	99	93.088	ENSECAG00000014420	TRNT1	100	93.088	Equus_caballus
ENSUMAG00000024092	TRNT1	99	88.018	ENSEEUG00000009567	TRNT1	100	88.018	Erinaceus_europaeus
ENSUMAG00000024092	TRNT1	99	67.361	ENSELUG00000003802	trnt1	99	67.361	Esox_lucius
ENSUMAG00000024092	TRNT1	100	96.101	ENSFCAG00000026805	TRNT1	100	96.101	Felis_catus
ENSUMAG00000024092	TRNT1	88	74.740	ENSFALG00000013539	TRNT1	99	74.740	Ficedula_albicollis
ENSUMAG00000024092	TRNT1	99	90.531	ENSFDAG00000018412	TRNT1	99	90.531	Fukomys_damarensis
ENSUMAG00000024092	TRNT1	93	68.966	ENSFHEG00000019294	trnt1	96	68.966	Fundulus_heteroclitus
ENSUMAG00000024092	TRNT1	94	66.098	ENSGMOG00000007460	trnt1	96	66.098	Gadus_morhua
ENSUMAG00000024092	TRNT1	93	74.815	ENSGALG00000017368	TRNT1	94	74.815	Gallus_gallus
ENSUMAG00000024092	TRNT1	93	68.719	ENSGAFG00000008647	trnt1	96	68.719	Gambusia_affinis
ENSUMAG00000024092	TRNT1	97	64.941	ENSGACG00000011903	trnt1	99	64.941	Gasterosteus_aculeatus
ENSUMAG00000024092	TRNT1	99	78.422	ENSGAGG00000020942	TRNT1	98	78.422	Gopherus_agassizii
ENSUMAG00000024092	TRNT1	99	92.857	ENSGGOG00000015286	TRNT1	100	92.857	Gorilla_gorilla
ENSUMAG00000024092	TRNT1	97	67.294	ENSHBUG00000002797	trnt1	99	67.294	Haplochromis_burtoni
ENSUMAG00000024092	TRNT1	99	90.531	ENSHGLG00000003649	TRNT1	99	90.531	Heterocephalus_glaber_female
ENSUMAG00000024092	TRNT1	99	85.714	ENSHGLG00000000221	-	99	85.714	Heterocephalus_glaber_female
ENSUMAG00000024092	TRNT1	99	89.376	ENSHGLG00100016421	TRNT1	99	89.376	Heterocephalus_glaber_male
ENSUMAG00000024092	TRNT1	97	64.706	ENSHCOG00000010618	trnt1	99	64.706	Hippocampus_comes
ENSUMAG00000024092	TRNT1	95	68.510	ENSIPUG00000000971	trnt1	97	68.510	Ictalurus_punctatus
ENSUMAG00000024092	TRNT1	100	86.927	ENSSTOG00000000150	TRNT1	98	91.089	Ictidomys_tridecemlineatus
ENSUMAG00000024092	TRNT1	99	89.862	ENSJJAG00000018561	Trnt1	99	89.862	Jaculus_jaculus
ENSUMAG00000024092	TRNT1	97	67.059	ENSKMAG00000011307	trnt1	99	67.059	Kryptolebias_marmoratus
ENSUMAG00000024092	TRNT1	94	62.927	ENSLBEG00000019457	trnt1	97	62.927	Labrus_bergylta
ENSUMAG00000024092	TRNT1	100	70.872	ENSLACG00000013227	TRNT1	99	70.872	Latimeria_chalumnae
ENSUMAG00000024092	TRNT1	98	69.231	ENSLOCG00000011105	trnt1	98	69.231	Lepisosteus_oculatus
ENSUMAG00000024092	TRNT1	99	91.935	ENSLAFG00000023191	TRNT1	100	91.935	Loxodonta_africana
ENSUMAG00000024092	TRNT1	99	93.303	ENSMFAG00000045113	TRNT1	99	93.303	Macaca_fascicularis
ENSUMAG00000024092	TRNT1	99	93.303	ENSMMUG00000017983	TRNT1	99	93.303	Macaca_mulatta
ENSUMAG00000024092	TRNT1	99	93.303	ENSMNEG00000037805	TRNT1	99	93.303	Macaca_nemestrina
ENSUMAG00000024092	TRNT1	88	94.503	ENSMLEG00000033671	TRNT1	99	94.503	Mandrillus_leucophaeus
ENSUMAG00000024092	TRNT1	97	68.235	ENSMAMG00000023401	trnt1	99	68.235	Mastacembelus_armatus
ENSUMAG00000024092	TRNT1	97	67.294	ENSMZEG00005009141	trnt1	99	67.294	Maylandia_zebra
ENSUMAG00000024092	TRNT1	73	75.000	ENSMGAG00000009971	TRNT1	99	75.000	Meleagris_gallopavo
ENSUMAG00000024092	TRNT1	99	90.783	ENSMAUG00000020707	Trnt1	100	90.783	Mesocricetus_auratus
ENSUMAG00000024092	TRNT1	99	91.244	ENSMICG00000016615	TRNT1	100	91.244	Microcebus_murinus
ENSUMAG00000024092	TRNT1	99	89.862	ENSMOCG00000004539	Trnt1	100	89.862	Microtus_ochrogaster
ENSUMAG00000024092	TRNT1	95	67.554	ENSMMOG00000010742	trnt1	97	67.554	Mola_mola
ENSUMAG00000024092	TRNT1	99	83.180	ENSMODG00000004368	TRNT1	100	83.180	Monodelphis_domestica
ENSUMAG00000024092	TRNT1	97	66.353	ENSMALG00000008376	trnt1	99	66.353	Monopterus_albus
ENSUMAG00000024092	TRNT1	99	90.783	MGP_CAROLIEiJ_G0028698	Trnt1	100	90.783	Mus_caroli
ENSUMAG00000024092	TRNT1	99	90.323	ENSMUSG00000013736	Trnt1	100	90.323	Mus_musculus
ENSUMAG00000024092	TRNT1	99	90.323	MGP_PahariEiJ_G0022449	Trnt1	100	90.323	Mus_pahari
ENSUMAG00000024092	TRNT1	99	90.323	MGP_SPRETEiJ_G0029726	Trnt1	100	90.323	Mus_spretus
ENSUMAG00000024092	TRNT1	100	96.560	ENSMPUG00000017017	TRNT1	100	96.560	Mustela_putorius_furo
ENSUMAG00000024092	TRNT1	89	87.824	ENSMLUG00000011864	TRNT1	100	87.824	Myotis_lucifugus
ENSUMAG00000024092	TRNT1	99	89.171	ENSNGAG00000000537	Trnt1	100	89.171	Nannospalax_galili
ENSUMAG00000024092	TRNT1	79	67.246	ENSNBRG00000023606	trnt1	99	67.246	Neolamprologus_brichardi
ENSUMAG00000024092	TRNT1	99	92.627	ENSNLEG00000003226	TRNT1	100	92.627	Nomascus_leucogenys
ENSUMAG00000024092	TRNT1	99	83.641	ENSMEUG00000004684	TRNT1	100	83.641	Notamacropus_eugenii
ENSUMAG00000024092	TRNT1	88	78.329	ENSOPRG00000015067	TRNT1	99	78.329	Ochotona_princeps
ENSUMAG00000024092	TRNT1	99	89.838	ENSODEG00000007597	TRNT1	99	89.838	Octodon_degus
ENSUMAG00000024092	TRNT1	97	67.294	ENSONIG00000020273	trnt1	98	67.294	Oreochromis_niloticus
ENSUMAG00000024092	TRNT1	99	73.843	ENSOANG00000007514	TRNT1	99	73.843	Ornithorhynchus_anatinus
ENSUMAG00000024092	TRNT1	100	84.862	ENSOCUG00000008580	TRNT1	100	84.862	Oryctolagus_cuniculus
ENSUMAG00000024092	TRNT1	93	66.749	ENSORLG00000003165	trnt1	96	66.749	Oryzias_latipes
ENSUMAG00000024092	TRNT1	93	66.995	ENSORLG00020022060	trnt1	96	66.995	Oryzias_latipes_hni
ENSUMAG00000024092	TRNT1	93	66.256	ENSORLG00015018915	trnt1	95	66.256	Oryzias_latipes_hsok
ENSUMAG00000024092	TRNT1	94	64.806	ENSOMEG00000003331	trnt1	97	64.806	Oryzias_melastigma
ENSUMAG00000024092	TRNT1	99	90.553	ENSOARG00000008631	TRNT1	99	90.553	Ovis_aries
ENSUMAG00000024092	TRNT1	99	92.857	ENSPPAG00000043566	TRNT1	100	92.857	Pan_paniscus
ENSUMAG00000024092	TRNT1	100	95.413	ENSPPRG00000001327	TRNT1	100	95.413	Panthera_pardus
ENSUMAG00000024092	TRNT1	100	95.642	ENSPTIG00000011448	TRNT1	100	95.642	Panthera_tigris_altaica
ENSUMAG00000024092	TRNT1	99	92.396	ENSPTRG00000014564	TRNT1	100	92.396	Pan_troglodytes
ENSUMAG00000024092	TRNT1	99	93.303	ENSPANG00000025944	TRNT1	99	93.303	Papio_anubis
ENSUMAG00000024092	TRNT1	98	68.605	ENSPKIG00000020015	trnt1	99	68.605	Paramormyrops_kingsleyae
ENSUMAG00000024092	TRNT1	91	80.101	ENSPSIG00000017356	TRNT1	99	81.944	Pelodiscus_sinensis
ENSUMAG00000024092	TRNT1	97	66.118	ENSPMGG00000008888	trnt1	98	66.118	Periophthalmus_magnuspinnatus
ENSUMAG00000024092	TRNT1	99	90.783	ENSPEMG00000019845	Trnt1	100	90.783	Peromyscus_maniculatus_bairdii
ENSUMAG00000024092	TRNT1	99	83.871	ENSPCIG00000030436	TRNT1	100	83.871	Phascolarctos_cinereus
ENSUMAG00000024092	TRNT1	93	68.473	ENSPFOG00000006194	trnt1	95	68.473	Poecilia_formosa
ENSUMAG00000024092	TRNT1	93	68.473	ENSPLAG00000015623	trnt1	99	68.238	Poecilia_latipinna
ENSUMAG00000024092	TRNT1	93	68.473	ENSPMEG00000012216	trnt1	99	68.238	Poecilia_mexicana
ENSUMAG00000024092	TRNT1	93	68.227	ENSPREG00000021470	trnt1	96	68.227	Poecilia_reticulata
ENSUMAG00000024092	TRNT1	99	92.396	ENSPPYG00000013702	TRNT1	100	92.396	Pongo_abelii
ENSUMAG00000024092	TRNT1	88	91.123	ENSPCAG00000001951	TRNT1	100	91.123	Procavia_capensis
ENSUMAG00000024092	TRNT1	99	93.318	ENSPCOG00000022228	TRNT1	100	93.318	Propithecus_coquereli
ENSUMAG00000024092	TRNT1	88	91.406	ENSPVAG00000008784	TRNT1	100	91.406	Pteropus_vampyrus
ENSUMAG00000024092	TRNT1	97	67.294	ENSPNYG00000003120	trnt1	99	67.294	Pundamilia_nyererei
ENSUMAG00000024092	TRNT1	98	66.977	ENSPNAG00000000565	trnt1	99	66.977	Pygocentrus_nattereri
ENSUMAG00000024092	TRNT1	99	90.092	ENSRNOG00000006432	Trnt1	100	90.092	Rattus_norvegicus
ENSUMAG00000024092	TRNT1	99	90.783	ENSRBIG00000042632	TRNT1	100	90.783	Rhinopithecus_bieti
ENSUMAG00000024092	TRNT1	99	93.088	ENSRROG00000036866	TRNT1	100	93.088	Rhinopithecus_roxellana
ENSUMAG00000024092	TRNT1	99	92.166	ENSSBOG00000021208	TRNT1	100	92.166	Saimiri_boliviensis_boliviensis
ENSUMAG00000024092	TRNT1	99	83.180	ENSSHAG00000018861	TRNT1	100	83.180	Sarcophilus_harrisii
ENSUMAG00000024092	TRNT1	99	67.198	ENSSFOG00015020844	trnt1	99	67.667	Scleropages_formosus
ENSUMAG00000024092	TRNT1	97	66.824	ENSSMAG00000015432	trnt1	97	66.824	Scophthalmus_maximus
ENSUMAG00000024092	TRNT1	97	66.353	ENSSDUG00000012320	trnt1	99	66.353	Seriola_dumerili
ENSUMAG00000024092	TRNT1	97	66.353	ENSSLDG00000009325	trnt1	99	66.353	Seriola_lalandi_dorsalis
ENSUMAG00000024092	TRNT1	55	64.435	ENSSLDG00000016463	-	91	64.435	Seriola_lalandi_dorsalis
ENSUMAG00000024092	TRNT1	88	82.245	ENSSPUG00000014153	TRNT1	99	82.245	Sphenodon_punctatus
ENSUMAG00000024092	TRNT1	97	67.059	ENSSPAG00000021005	trnt1	99	67.059	Stegastes_partitus
ENSUMAG00000024092	TRNT1	99	91.705	ENSSSCG00000011529	TRNT1	100	91.705	Sus_scrofa
ENSUMAG00000024092	TRNT1	93	74.321	ENSTGUG00000010192	TRNT1	99	74.321	Taeniopygia_guttata
ENSUMAG00000024092	TRNT1	97	67.294	ENSTRUG00000001088	trnt1	99	67.294	Takifugu_rubripes
ENSUMAG00000024092	TRNT1	93	69.704	ENSTNIG00000007363	trnt1	94	69.704	Tetraodon_nigroviridis
ENSUMAG00000024092	TRNT1	70	77.903	ENSTBEG00000006367	TRNT1	100	77.903	Tupaia_belangeri
ENSUMAG00000024092	TRNT1	99	90.553	ENSTTRG00000007803	TRNT1	100	90.553	Tursiops_truncatus
ENSUMAG00000024092	TRNT1	100	99.541	ENSUAMG00000022574	TRNT1	100	99.541	Ursus_americanus
ENSUMAG00000024092	TRNT1	100	95.872	ENSVVUG00000012810	TRNT1	100	95.872	Vulpes_vulpes
ENSUMAG00000024092	TRNT1	96	63.744	ENSXETG00000025091	trnt1	99	65.672	Xenopus_tropicalis
ENSUMAG00000024092	TRNT1	93	68.719	ENSXCOG00000010150	trnt1	96	68.719	Xiphophorus_couchianus
ENSUMAG00000024092	TRNT1	93	68.227	ENSXMAG00000002227	trnt1	96	68.227	Xiphophorus_maculatus