EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000024173 (Gene tree)
Gene ID: 103666897
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 46748 bases
Position: chrKK498615.1:25614242-25660989
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000033547	ResIII	PF04851.15	5.7e-08	1	1
ENSUMAP00000033550	ResIII	PF04851.15	6e-08	1	1
ENSUMAP00000033548	ResIII	PF04851.15	7.1e-08	1	1
ENSUMAP00000033546	ResIII	PF04851.15	7.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000039687	CHD5-201	5535	-	ENSUMAP00000033546	1844 (aa)	-	-
ENSUMAT00000039691	CHD5-204	3405	-	ENSUMAP00000033550	1134 (aa)	-	-
ENSUMAT00000039694	CHD5-205	1182	-	ENSUMAP00000033552	393 (aa)	-	-
ENSUMAT00000039689	CHD5-203	5514	-	ENSUMAP00000033548	1837 (aa)	-	-
ENSUMAT00000039688	CHD5-202	5406	-	ENSUMAP00000033547	1801 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000024173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000024173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000024173	CHD5	90	80.476	ENSUMAG00000005336	-	93	77.679
ENSUMAG00000024173	CHD5	59	40.404	ENSUMAG00000002017	CHD6	88	40.691

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000024173	CHD5	98	93.290	ENSG00000116254	CHD5	96	97.547	Homo_sapiens
ENSUMAG00000024173	CHD5	98	96.091	ENSAMEG00000009880	CHD5	99	94.850	Ailuropoda_melanoleuca
ENSUMAG00000024173	CHD5	96	74.986	ENSACIG00000012582	chd5	98	74.601	Amphilophus_citrinellus
ENSUMAG00000024173	CHD5	95	75.917	ENSAOCG00000020356	chd5	94	74.672	Amphiprion_ocellaris
ENSUMAG00000024173	CHD5	96	79.781	ENSAPLG00000015475	CHD5	97	79.514	Anas_platyrhynchos
ENSUMAG00000024173	CHD5	98	79.746	ENSACAG00000002441	CHD5	97	79.361	Anolis_carolinensis
ENSUMAG00000024173	CHD5	89	93.022	ENSANAG00000001078	CHD5	91	93.081	Aotus_nancymaae
ENSUMAG00000024173	CHD5	95	72.031	ENSACLG00000003012	chd5	96	71.776	Astatotilapia_calliptera
ENSUMAG00000024173	CHD5	87	78.013	ENSAMXG00000008921	chd5	91	92.708	Astyanax_mexicanus
ENSUMAG00000024173	CHD5	95	91.731	ENSBTAG00000040477	CHD5	100	91.731	Bos_taurus
ENSUMAG00000024173	CHD5	98	92.965	ENSCJAG00000000101	CHD5	98	91.776	Callithrix_jacchus
ENSUMAG00000024173	CHD5	96	92.416	ENSCAFG00000019545	CHD5	99	93.867	Canis_familiaris
ENSUMAG00000024173	CHD5	98	95.279	ENSCAFG00020008689	CHD5	95	93.874	Canis_lupus_dingo
ENSUMAG00000024173	CHD5	98	93.580	ENSCHIG00000015027	CHD5	95	91.339	Capra_hircus
ENSUMAG00000024173	CHD5	98	88.455	ENSTSYG00000033991	CHD5	98	87.481	Carlito_syrichta
ENSUMAG00000024173	CHD5	98	91.504	ENSCAPG00000009294	CHD5	99	90.204	Cavia_aperea
ENSUMAG00000024173	CHD5	98	91.558	ENSCPOG00000025080	CHD5	99	90.257	Cavia_porcellus
ENSUMAG00000024173	CHD5	98	92.911	ENSCCAG00000024756	CHD5	98	91.671	Cebus_capucinus
ENSUMAG00000024173	CHD5	98	92.316	ENSCATG00000043011	CHD5	98	91.042	Cercocebus_atys
ENSUMAG00000024173	CHD5	98	91.721	ENSCLAG00000010589	CHD5	99	90.414	Chinchilla_lanigera
ENSUMAG00000024173	CHD5	98	93.344	ENSCSAG00000000733	CHD5	98	92.038	Chlorocebus_sabaeus
ENSUMAG00000024173	CHD5	95	86.052	ENSCPBG00000019363	CHD5	99	86.099	Chrysemys_picta_bellii
ENSUMAG00000024173	CHD5	98	93.344	ENSCANG00000032302	CHD5	98	91.985	Colobus_angolensis_palliatus
ENSUMAG00000024173	CHD5	90	90.472	ENSCGRG00001011042	Chd5	100	90.472	Cricetulus_griseus_chok1gshd
ENSUMAG00000024173	CHD5	98	90.112	ENSCGRG00000011341	Chd5	99	89.785	Cricetulus_griseus_crigri
ENSUMAG00000024173	CHD5	98	74.194	ENSDARG00000105083	chd5	97	76.542	Danio_rerio
ENSUMAG00000024173	CHD5	96	70.086	ENSDARG00000025789	chd4b	95	65.543	Danio_rerio
ENSUMAG00000024173	CHD5	93	93.267	ENSDNOG00000046342	CHD5	98	86.845	Dasypus_novemcinctus
ENSUMAG00000024173	CHD5	98	90.759	ENSDORG00000005923	Chd5	99	90.576	Dipodomys_ordii
ENSUMAG00000024173	CHD5	98	92.091	ENSEASG00005021464	CHD5	96	90.885	Equus_asinus_asinus
ENSUMAG00000024173	CHD5	98	92.241	ENSECAG00000025043	CHD5	97	97.260	Equus_caballus
ENSUMAG00000024173	CHD5	76	99.342	ENSEEUG00000002772	CHD5	72	99.342	Erinaceus_europaeus
ENSUMAG00000024173	CHD5	88	84.000	ENSELUG00000010742	chd5	88	93.846	Esox_lucius
ENSUMAG00000024173	CHD5	98	94.954	ENSFCAG00000006319	CHD5	98	93.750	Felis_catus
ENSUMAG00000024173	CHD5	99	84.623	ENSFALG00000009740	CHD5	97	84.623	Ficedula_albicollis
ENSUMAG00000024173	CHD5	98	91.180	ENSFDAG00000012881	CHD5	94	91.254	Fukomys_damarensis
ENSUMAG00000024173	CHD5	99	84.011	ENSGALG00000000747	CHD5	97	83.852	Gallus_gallus
ENSUMAG00000024173	CHD5	86	76.931	ENSGACG00000004389	chd5	99	76.277	Gasterosteus_aculeatus
ENSUMAG00000024173	CHD5	88	98.324	ENSGAGG00000001590	CHD5	98	96.703	Gopherus_agassizii
ENSUMAG00000024173	CHD5	98	93.236	ENSGGOG00000000708	CHD5	99	91.881	Gorilla_gorilla
ENSUMAG00000024173	CHD5	95	73.158	ENSHBUG00000013453	chd5	96	72.602	Haplochromis_burtoni
ENSUMAG00000024173	CHD5	99	90.047	ENSHGLG00000018184	CHD5	99	90.340	Heterocephalus_glaber_female
ENSUMAG00000024173	CHD5	98	89.940	ENSHGLG00100013261	CHD5	97	88.194	Heterocephalus_glaber_male
ENSUMAG00000024173	CHD5	95	75.014	ENSIPUG00000005446	chd5	98	75.308	Ictalurus_punctatus
ENSUMAG00000024173	CHD5	100	90.733	ENSSTOG00000002778	CHD5	99	91.079	Ictidomys_tridecemlineatus
ENSUMAG00000024173	CHD5	98	90.484	ENSJJAG00000019072	Chd5	98	90.100	Jaculus_jaculus
ENSUMAG00000024173	CHD5	62	82.739	ENSLACG00000022233	-	99	81.641	Latimeria_chalumnae
ENSUMAG00000024173	CHD5	98	78.441	ENSLOCG00000004944	chd5	95	78.370	Lepisosteus_oculatus
ENSUMAG00000024173	CHD5	98	93.019	ENSLAFG00000006348	CHD5	99	91.881	Loxodonta_africana
ENSUMAG00000024173	CHD5	98	93.970	ENSMFAG00000033993	CHD5	100	91.290	Macaca_fascicularis
ENSUMAG00000024173	CHD5	100	91.300	ENSMMUG00000016838	CHD5	99	91.300	Macaca_mulatta
ENSUMAG00000024173	CHD5	98	93.970	ENSMNEG00000040044	CHD5	98	92.038	Macaca_nemestrina
ENSUMAG00000024173	CHD5	99	93.605	ENSMLEG00000039166	CHD5	97	93.605	Mandrillus_leucophaeus
ENSUMAG00000024173	CHD5	95	71.909	ENSMZEG00005000841	chd5	91	77.569	Maylandia_zebra
ENSUMAG00000024173	CHD5	98	84.180	ENSMGAG00000001055	CHD5	97	83.922	Meleagris_gallopavo
ENSUMAG00000024173	CHD5	98	89.897	ENSMICG00000017862	CHD5	98	88.155	Microcebus_murinus
ENSUMAG00000024173	CHD5	98	89.899	ENSMOCG00000011049	Chd5	98	89.838	Microtus_ochrogaster
ENSUMAG00000024173	CHD5	91	81.643	ENSMODG00000006294	CHD5	77	91.101	Monodelphis_domestica
ENSUMAG00000024173	CHD5	95	74.973	ENSMALG00000002831	chd5	99	72.219	Monopterus_albus
ENSUMAG00000024173	CHD5	98	90.112	MGP_CAROLIEiJ_G0026857	Chd5	98	89.733	Mus_caroli
ENSUMAG00000024173	CHD5	98	89.751	ENSMUSG00000005045	Chd5	98	89.316	Mus_musculus
ENSUMAG00000024173	CHD5	98	90.114	MGP_PahariEiJ_G0029205	Chd5	98	89.781	Mus_pahari
ENSUMAG00000024173	CHD5	98	90.060	MGP_SPRETEiJ_G0027850	Chd5	98	89.674	Mus_spretus
ENSUMAG00000024173	CHD5	98	90.671	ENSMPUG00000007122	CHD5	99	93.548	Mustela_putorius_furo
ENSUMAG00000024173	CHD5	98	89.650	ENSNGAG00000019812	Chd5	95	89.733	Nannospalax_galili
ENSUMAG00000024173	CHD5	98	90.963	ENSNLEG00000010320	CHD5	99	89.209	Nomascus_leucogenys
ENSUMAG00000024173	CHD5	88	90.987	ENSOPRG00000004304	CHD5	86	90.204	Ochotona_princeps
ENSUMAG00000024173	CHD5	98	91.396	ENSODEG00000010262	CHD5	99	90.204	Octodon_degus
ENSUMAG00000024173	CHD5	95	74.672	ENSONIG00000000619	chd5	97	73.637	Oreochromis_niloticus
ENSUMAG00000024173	CHD5	97	69.936	ENSOANG00000001819	CHD5	98	69.936	Ornithorhynchus_anatinus
ENSUMAG00000024173	CHD5	98	90.968	ENSOGAG00000005703	CHD5	98	89.738	Otolemur_garnettii
ENSUMAG00000024173	CHD5	100	90.733	ENSOARG00000013425	CHD5	99	90.733	Ovis_aries
ENSUMAG00000024173	CHD5	98	93.294	ENSPPAG00000034048	CHD5	99	91.937	Pan_paniscus
ENSUMAG00000024173	CHD5	98	94.357	ENSPPRG00000009453	CHD5	98	93.172	Panthera_pardus
ENSUMAG00000024173	CHD5	98	89.122	ENSPTIG00000013926	CHD5	99	86.392	Panthera_tigris_altaica
ENSUMAG00000024173	CHD5	98	93.294	ENSPTRG00000000075	CHD5	98	91.937	Pan_troglodytes
ENSUMAG00000024173	CHD5	98	93.970	ENSPANG00000006765	CHD5	98	91.985	Papio_anubis
ENSUMAG00000024173	CHD5	96	76.204	ENSPKIG00000004282	chd5	96	75.475	Paramormyrops_kingsleyae
ENSUMAG00000024173	CHD5	97	78.773	ENSPSIG00000006414	CHD5	99	79.204	Pelodiscus_sinensis
ENSUMAG00000024173	CHD5	92	89.732	ENSPEMG00000014799	Chd5	99	91.261	Peromyscus_maniculatus_bairdii
ENSUMAG00000024173	CHD5	99	87.433	ENSPCIG00000028310	CHD5	97	87.311	Phascolarctos_cinereus
ENSUMAG00000024173	CHD5	95	73.159	ENSPLAG00000005343	chd5	99	72.434	Poecilia_latipinna
ENSUMAG00000024173	CHD5	98	90.098	ENSPPYG00000001952	CHD5	99	88.294	Pongo_abelii
ENSUMAG00000024173	CHD5	98	93.236	ENSPCOG00000022930	CHD5	98	91.985	Propithecus_coquereli
ENSUMAG00000024173	CHD5	95	75.069	ENSPNYG00000003183	chd5	98	73.705	Pundamilia_nyererei
ENSUMAG00000024173	CHD5	98	90.005	ENSRNOG00000011268	Chd5	99	89.634	Rattus_norvegicus
ENSUMAG00000024173	CHD5	96	92.568	ENSRBIG00000032140	CHD5	95	92.988	Rhinopithecus_bieti
ENSUMAG00000024173	CHD5	98	93.131	ENSRROG00000041146	CHD5	98	91.723	Rhinopithecus_roxellana
ENSUMAG00000024173	CHD5	98	88.667	ENSSBOG00000001955	CHD5	100	90.488	Saimiri_boliviensis_boliviensis
ENSUMAG00000024173	CHD5	98	83.289	ENSSHAG00000018641	CHD5	99	83.449	Sarcophilus_harrisii
ENSUMAG00000024173	CHD5	90	90.233	ENSSFOG00015006296	chd5	89	95.312	Scleropages_formosus
ENSUMAG00000024173	CHD5	95	75.219	ENSSDUG00000017526	chd5	90	92.105	Seriola_dumerili
ENSUMAG00000024173	CHD5	98	77.555	ENSSPUG00000010622	CHD5	98	76.366	Sphenodon_punctatus
ENSUMAG00000024173	CHD5	96	93.774	ENSSSCG00000003366	CHD5	99	92.397	Sus_scrofa
ENSUMAG00000024173	CHD5	95	84.770	ENSTGUG00000002634	-	99	85.033	Taeniopygia_guttata
ENSUMAG00000024173	CHD5	86	77.579	ENSTNIG00000004346	chd5	99	77.910	Tetraodon_nigroviridis
ENSUMAG00000024173	CHD5	99	90.590	ENSTTRG00000010468	CHD5	98	90.590	Tursiops_truncatus
ENSUMAG00000024173	CHD5	100	95.291	ENSUAMG00000024509	CHD5	99	95.291	Ursus_americanus
ENSUMAG00000024173	CHD5	98	95.792	ENSVVUG00000026480	CHD5	96	97.248	Vulpes_vulpes
ENSUMAG00000024173	CHD5	98	76.812	ENSXETG00000002904	chd5	100	76.865	Xenopus_tropicalis
ENSUMAG00000024173	CHD5	86	75.612	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus