EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000024458 (Gene tree)
Gene ID: -
Gene Symbol: SNAI1
Alias: SLUGH2|SNA|SNAH|SNAIL|SNAIL1
Full Name: snail family transcriptional repressor 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 5593 bases
Position: chrKK498640.1:3617483-3623075
Accession: 11128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000033936	zf-C2H2	PF00096.26	2.7e-19	1	3
ENSUMAP00000033936	zf-C2H2	PF00096.26	2.7e-19	2	3
ENSUMAP00000033936	zf-C2H2	PF00096.26	2.7e-19	3	3
ENSUMAP00000033936	zf-met	PF12874.7	8.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000040161	SNAI1-201	741	-	ENSUMAP00000033936	246 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000024458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000024458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000024458	SNAI1	51	41.600	ENSUMAG00000007135	-	74	46.667
ENSUMAG00000024458	SNAI1	79	42.991	ENSUMAG00000019336	-	91	42.991
ENSUMAG00000024458	SNAI1	50	43.810	ENSUMAG00000007577	-	93	43.810
ENSUMAG00000024458	SNAI1	96	44.118	ENSUMAG00000003733	PRDM5	79	44.118
ENSUMAG00000024458	SNAI1	51	40.385	ENSUMAG00000004061	-	75	40.385
ENSUMAG00000024458	SNAI1	57	38.095	ENSUMAG00000017894	-	72	38.095
ENSUMAG00000024458	SNAI1	83	44.118	ENSUMAG00000007151	-	67	43.810
ENSUMAG00000024458	SNAI1	84	39.252	ENSUMAG00000024271	ZFP64	56	39.252
ENSUMAG00000024458	SNAI1	91	53.191	ENSUMAG00000006525	SNAI2	87	53.191
ENSUMAG00000024458	SNAI1	50	41.053	ENSUMAG00000019496	-	84	41.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000024458	SNAI1	96	89.831	ENSG00000124216	SNAI1	89	89.831	Homo_sapiens
ENSUMAG00000024458	SNAI1	89	56.277	ENSAPOG00000003886	snai2	66	55.844	Acanthochromis_polyacanthus
ENSUMAG00000024458	SNAI1	96	99.576	ENSAMEG00000013478	SNAI1	89	99.576	Ailuropoda_melanoleuca
ENSUMAG00000024458	SNAI1	89	56.710	ENSACIG00000018641	snai2	84	56.277	Amphilophus_citrinellus
ENSUMAG00000024458	SNAI1	82	54.128	ENSACIG00000009443	-	79	53.991	Amphilophus_citrinellus
ENSUMAG00000024458	SNAI1	89	56.710	ENSAOCG00000017968	snai2	84	56.277	Amphiprion_ocellaris
ENSUMAG00000024458	SNAI1	89	56.710	ENSAPEG00000002983	snai2	84	56.277	Amphiprion_percula
ENSUMAG00000024458	SNAI1	85	56.561	ENSATEG00000006892	snai2	84	56.710	Anabas_testudineus
ENSUMAG00000024458	SNAI1	88	53.219	ENSAPLG00000003920	-	86	53.419	Anas_platyrhynchos
ENSUMAG00000024458	SNAI1	90	64.865	ENSAPLG00000014633	-	93	64.865	Anas_platyrhynchos
ENSUMAG00000024458	SNAI1	90	56.332	ENSACAG00000015607	SNAI1	89	54.894	Anolis_carolinensis
ENSUMAG00000024458	SNAI1	91	53.846	ENSACAG00000012332	-	86	53.846	Anolis_carolinensis
ENSUMAG00000024458	SNAI1	96	90.254	ENSANAG00000028666	SNAI1	89	90.254	Aotus_nancymaae
ENSUMAG00000024458	SNAI1	89	58.636	ENSACLG00000018551	snai2	83	57.727	Astatotilapia_calliptera
ENSUMAG00000024458	SNAI1	93	56.540	ENSAMXG00000038235	snai2	88	54.545	Astyanax_mexicanus
ENSUMAG00000024458	SNAI1	96	94.915	ENSBTAG00000014554	SNAI1	89	94.915	Bos_taurus
ENSUMAG00000024458	SNAI1	96	89.407	ENSCJAG00000000518	SNAI1	89	89.407	Callithrix_jacchus
ENSUMAG00000024458	SNAI1	96	98.729	ENSCAFG00000011499	SNAI1	99	98.729	Canis_familiaris
ENSUMAG00000024458	SNAI1	96	98.729	ENSCAFG00020017479	SNAI1	89	98.729	Canis_lupus_dingo
ENSUMAG00000024458	SNAI1	96	94.915	ENSCHIG00000014308	SNAI1	89	94.915	Capra_hircus
ENSUMAG00000024458	SNAI1	96	90.678	ENSTSYG00000010834	SNAI1	89	90.678	Carlito_syrichta
ENSUMAG00000024458	SNAI1	100	86.400	ENSCAPG00000014002	SNAI1	97	86.400	Cavia_aperea
ENSUMAG00000024458	SNAI1	96	89.407	ENSCPOG00000026663	SNAI1	89	89.407	Cavia_porcellus
ENSUMAG00000024458	SNAI1	91	53.191	ENSCPOG00000033449	-	86	53.191	Cavia_porcellus
ENSUMAG00000024458	SNAI1	96	90.254	ENSCCAG00000029550	SNAI1	89	90.254	Cebus_capucinus
ENSUMAG00000024458	SNAI1	96	90.678	ENSCATG00000041452	SNAI1	89	90.678	Cercocebus_atys
ENSUMAG00000024458	SNAI1	96	89.831	ENSCLAG00000012285	SNAI1	89	89.831	Chinchilla_lanigera
ENSUMAG00000024458	SNAI1	96	90.678	ENSCSAG00000015065	SNAI1	89	90.678	Chlorocebus_sabaeus
ENSUMAG00000024458	SNAI1	89	54.545	ENSCHOG00000007046	-	88	53.617	Choloepus_hoffmanni
ENSUMAG00000024458	SNAI1	96	90.254	ENSCANG00000036400	SNAI1	89	90.254	Colobus_angolensis_palliatus
ENSUMAG00000024458	SNAI1	96	88.559	ENSCGRG00001007749	Snai1	89	88.559	Cricetulus_griseus_chok1gshd
ENSUMAG00000024458	SNAI1	96	88.559	ENSCGRG00000009080	Snai1	89	88.559	Cricetulus_griseus_crigri
ENSUMAG00000024458	SNAI1	89	53.712	ENSCSEG00000010311	snai2	84	56.466	Cynoglossus_semilaevis
ENSUMAG00000024458	SNAI1	89	54.386	ENSCVAG00000016483	snai2	81	54.545	Cyprinodon_variegatus
ENSUMAG00000024458	SNAI1	93	56.250	ENSDARG00000040046	snai2	88	56.118	Danio_rerio
ENSUMAG00000024458	SNAI1	91	53.617	ENSDNOG00000035997	-	86	53.617	Dasypus_novemcinctus
ENSUMAG00000024458	SNAI1	96	91.102	ENSDNOG00000023834	-	89	91.102	Dasypus_novemcinctus
ENSUMAG00000024458	SNAI1	96	75.105	ENSDNOG00000024891	-	89	73.418	Dasypus_novemcinctus
ENSUMAG00000024458	SNAI1	96	86.192	ENSDORG00000025372	Snai1	99	86.192	Dipodomys_ordii
ENSUMAG00000024458	SNAI1	91	48.085	ENSETEG00000005777	-	86	47.881	Echinops_telfairi
ENSUMAG00000024458	SNAI1	91	53.191	ENSEASG00005009186	-	86	53.191	Equus_asinus_asinus
ENSUMAG00000024458	SNAI1	91	53.191	ENSECAG00000010120	SNAI2	86	53.191	Equus_caballus
ENSUMAG00000024458	SNAI1	96	94.093	ENSECAG00000009787	SNAI1	89	94.093	Equus_caballus
ENSUMAG00000024458	SNAI1	91	50.000	ENSFCAG00000015779	-	86	52.766	Felis_catus
ENSUMAG00000024458	SNAI1	96	97.458	ENSFCAG00000010558	SNAI1	89	97.458	Felis_catus
ENSUMAG00000024458	SNAI1	88	53.219	ENSFALG00000005762	-	86	53.419	Ficedula_albicollis
ENSUMAG00000024458	SNAI1	96	90.678	ENSFDAG00000005851	SNAI1	89	90.678	Fukomys_damarensis
ENSUMAG00000024458	SNAI1	89	54.783	ENSFHEG00000012561	snai2	84	54.545	Fundulus_heteroclitus
ENSUMAG00000024458	SNAI1	93	54.508	ENSGMOG00000002669	snai2	88	53.689	Gadus_morhua
ENSUMAG00000024458	SNAI1	68	60.119	ENSGMOG00000000127	-	55	68.382	Gadus_morhua
ENSUMAG00000024458	SNAI1	69	65.680	ENSGALG00000030902	-	55	73.611	Gallus_gallus
ENSUMAG00000024458	SNAI1	90	62.667	ENSGALG00000008018	SNAI1	85	62.667	Gallus_gallus
ENSUMAG00000024458	SNAI1	89	55.652	ENSGAFG00000021427	snai2	84	56.277	Gambusia_affinis
ENSUMAG00000024458	SNAI1	88	53.304	ENSGACG00000017935	snai2	83	55.652	Gasterosteus_aculeatus
ENSUMAG00000024458	SNAI1	90	62.174	ENSGAGG00000022705	SNAI1	87	62.174	Gopherus_agassizii
ENSUMAG00000024458	SNAI1	96	91.102	ENSGGOG00000024422	SNAI1	89	91.102	Gorilla_gorilla
ENSUMAG00000024458	SNAI1	89	58.636	ENSHBUG00000007764	snai2	83	57.727	Haplochromis_burtoni
ENSUMAG00000024458	SNAI1	96	92.797	ENSHGLG00000005310	SNAI1	89	92.797	Heterocephalus_glaber_female
ENSUMAG00000024458	SNAI1	91	53.191	ENSHGLG00000009439	SNAI2	86	53.191	Heterocephalus_glaber_female
ENSUMAG00000024458	SNAI1	96	92.797	ENSHGLG00100018390	SNAI1	89	92.797	Heterocephalus_glaber_male
ENSUMAG00000024458	SNAI1	91	53.191	ENSHGLG00100007484	SNAI2	86	53.191	Heterocephalus_glaber_male
ENSUMAG00000024458	SNAI1	96	92.373	ENSSTOG00000005866	SNAI1	89	92.373	Ictidomys_tridecemlineatus
ENSUMAG00000024458	SNAI1	91	53.191	ENSJJAG00000017495	-	86	53.191	Jaculus_jaculus
ENSUMAG00000024458	SNAI1	96	86.441	ENSJJAG00000017317	Snai1	89	88.559	Jaculus_jaculus
ENSUMAG00000024458	SNAI1	89	53.947	ENSKMAG00000005164	snai2	84	56.034	Kryptolebias_marmoratus
ENSUMAG00000024458	SNAI1	89	56.637	ENSLBEG00000000972	snai2	89	56.828	Labrus_bergylta
ENSUMAG00000024458	SNAI1	90	59.483	ENSLACG00000017707	SNAI1	85	56.828	Latimeria_chalumnae
ENSUMAG00000024458	SNAI1	88	55.556	ENSLACG00000005413	snai2	84	55.217	Latimeria_chalumnae
ENSUMAG00000024458	SNAI1	96	90.678	ENSLAFG00000030265	SNAI1	89	90.678	Loxodonta_africana
ENSUMAG00000024458	SNAI1	96	90.678	ENSMFAG00000000994	SNAI1	89	90.678	Macaca_fascicularis
ENSUMAG00000024458	SNAI1	96	90.254	ENSMNEG00000036933	SNAI1	89	90.254	Macaca_nemestrina
ENSUMAG00000024458	SNAI1	96	90.678	ENSMLEG00000039236	SNAI1	89	90.678	Mandrillus_leucophaeus
ENSUMAG00000024458	SNAI1	89	56.710	ENSMAMG00000015632	snai2	84	56.277	Mastacembelus_armatus
ENSUMAG00000024458	SNAI1	89	58.636	ENSMZEG00005025060	snai2	83	57.727	Maylandia_zebra
ENSUMAG00000024458	SNAI1	90	62.667	ENSMGAG00000009447	SNAI1	85	62.667	Meleagris_gallopavo
ENSUMAG00000024458	SNAI1	88	53.219	ENSMGAG00000010813	-	86	53.419	Meleagris_gallopavo
ENSUMAG00000024458	SNAI1	96	89.407	ENSMAUG00000021592	Snai1	89	89.407	Mesocricetus_auratus
ENSUMAG00000024458	SNAI1	91	54.043	ENSMICG00000000335	-	86	54.043	Microcebus_murinus
ENSUMAG00000024458	SNAI1	96	91.525	ENSMICG00000042228	SNAI1	89	91.525	Microcebus_murinus
ENSUMAG00000024458	SNAI1	96	89.831	ENSMOCG00000007847	Snai1	89	89.831	Microtus_ochrogaster
ENSUMAG00000024458	SNAI1	92	64.348	ENSMODG00000016309	SNAI1	87	60.699	Monodelphis_domestica
ENSUMAG00000024458	SNAI1	89	58.636	ENSMALG00000021318	snai2	83	57.727	Monopterus_albus
ENSUMAG00000024458	SNAI1	94	50.000	ENSMALG00000001010	-	94	50.000	Monopterus_albus
ENSUMAG00000024458	SNAI1	96	88.559	MGP_CAROLIEiJ_G0024709	Snai1	89	88.559	Mus_caroli
ENSUMAG00000024458	SNAI1	96	88.983	ENSMUSG00000042821	Snai1	89	88.983	Mus_musculus
ENSUMAG00000024458	SNAI1	96	88.559	MGP_PahariEiJ_G0026151	Snai1	89	88.559	Mus_pahari
ENSUMAG00000024458	SNAI1	96	88.559	MGP_SPRETEiJ_G0025629	Snai1	89	88.559	Mus_spretus
ENSUMAG00000024458	SNAI1	96	100.000	ENSMPUG00000017558	SNAI1	89	100.000	Mustela_putorius_furo
ENSUMAG00000024458	SNAI1	96	86.383	ENSMLUG00000011649	-	89	85.106	Myotis_lucifugus
ENSUMAG00000024458	SNAI1	96	93.644	ENSMLUG00000015053	-	89	93.644	Myotis_lucifugus
ENSUMAG00000024458	SNAI1	96	91.525	ENSNGAG00000017185	Snai1	89	91.525	Nannospalax_galili
ENSUMAG00000024458	SNAI1	91	52.282	ENSNGAG00000009442	-	86	52.766	Nannospalax_galili
ENSUMAG00000024458	SNAI1	89	58.636	ENSNBRG00000011785	snai2	83	57.727	Neolamprologus_brichardi
ENSUMAG00000024458	SNAI1	96	91.102	ENSNLEG00000006985	SNAI1	89	91.102	Nomascus_leucogenys
ENSUMAG00000024458	SNAI1	91	53.191	ENSODEG00000003654	-	86	53.191	Octodon_degus
ENSUMAG00000024458	SNAI1	96	89.873	ENSODEG00000007856	SNAI1	89	89.873	Octodon_degus
ENSUMAG00000024458	SNAI1	89	56.277	ENSONIG00000009542	snai2	84	55.844	Oreochromis_niloticus
ENSUMAG00000024458	SNAI1	93	60.581	ENSOANG00000008681	SNAI1	91	59.917	Ornithorhynchus_anatinus
ENSUMAG00000024458	SNAI1	96	86.441	ENSOCUG00000005422	SNAI1	97	86.441	Oryctolagus_cuniculus
ENSUMAG00000024458	SNAI1	91	53.191	ENSOCUG00000012254	-	86	53.191	Oryctolagus_cuniculus
ENSUMAG00000024458	SNAI1	89	56.140	ENSORLG00000017475	snai2	84	55.702	Oryzias_latipes
ENSUMAG00000024458	SNAI1	89	56.140	ENSORLG00020008787	snai2	84	55.702	Oryzias_latipes_hni
ENSUMAG00000024458	SNAI1	89	56.140	ENSORLG00015008609	snai2	84	55.702	Oryzias_latipes_hsok
ENSUMAG00000024458	SNAI1	89	57.919	ENSOMEG00000006591	snai2	83	57.466	Oryzias_melastigma
ENSUMAG00000024458	SNAI1	91	52.500	ENSOGAG00000010500	-	86	52.500	Otolemur_garnettii
ENSUMAG00000024458	SNAI1	96	90.254	ENSOGAG00000030111	SNAI1	89	90.254	Otolemur_garnettii
ENSUMAG00000024458	SNAI1	96	91.525	ENSOARG00000013174	SNAI1	68	94.492	Ovis_aries
ENSUMAG00000024458	SNAI1	96	91.102	ENSPPAG00000041096	SNAI1	89	91.102	Pan_paniscus
ENSUMAG00000024458	SNAI1	96	97.458	ENSPPRG00000013272	SNAI1	89	97.458	Panthera_pardus
ENSUMAG00000024458	SNAI1	96	91.102	ENSPTRG00000050285	SNAI1	89	91.102	Pan_troglodytes
ENSUMAG00000024458	SNAI1	96	90.678	ENSPANG00000007536	SNAI1	89	90.678	Papio_anubis
ENSUMAG00000024458	SNAI1	90	61.304	ENSPSIG00000003607	SNAI1	84	60.515	Pelodiscus_sinensis
ENSUMAG00000024458	SNAI1	96	89.407	ENSPEMG00000023213	Snai1	89	89.407	Peromyscus_maniculatus_bairdii
ENSUMAG00000024458	SNAI1	92	64.348	ENSPCIG00000023282	SNAI1	87	60.699	Phascolarctos_cinereus
ENSUMAG00000024458	SNAI1	89	55.217	ENSPFOG00000014336	snai2	84	55.844	Poecilia_formosa
ENSUMAG00000024458	SNAI1	89	55.217	ENSPLAG00000009941	snai2	84	55.844	Poecilia_latipinna
ENSUMAG00000024458	SNAI1	89	55.217	ENSPMEG00000024022	snai2	84	55.844	Poecilia_mexicana
ENSUMAG00000024458	SNAI1	96	90.678	ENSPPYG00000011122	SNAI1	89	90.678	Pongo_abelii
ENSUMAG00000024458	SNAI1	96	90.678	ENSPCAG00000011934	SNAI1	99	90.678	Procavia_capensis
ENSUMAG00000024458	SNAI1	96	91.525	ENSPCOG00000020538	SNAI1	89	91.525	Propithecus_coquereli
ENSUMAG00000024458	SNAI1	96	93.277	ENSPVAG00000004119	SNAI1	89	93.277	Pteropus_vampyrus
ENSUMAG00000024458	SNAI1	89	58.636	ENSPNYG00000015217	snai2	83	57.727	Pundamilia_nyererei
ENSUMAG00000024458	SNAI1	93	56.250	ENSPNAG00000015896	snai2	88	54.286	Pygocentrus_nattereri
ENSUMAG00000024458	SNAI1	97	88.285	ENSRNOG00000009594	Snai1	94	88.285	Rattus_norvegicus
ENSUMAG00000024458	SNAI1	91	53.191	ENSRNOG00000047699	Snai2	86	53.191	Rattus_norvegicus
ENSUMAG00000024458	SNAI1	96	89.831	ENSRBIG00000026992	SNAI1	89	89.831	Rhinopithecus_bieti
ENSUMAG00000024458	SNAI1	96	89.831	ENSRROG00000043753	SNAI1	89	89.831	Rhinopithecus_roxellana
ENSUMAG00000024458	SNAI1	96	89.873	ENSSBOG00000034760	SNAI1	89	89.873	Saimiri_boliviensis_boliviensis
ENSUMAG00000024458	SNAI1	93	63.948	ENSSHAG00000011015	SNAI1	87	60.262	Sarcophilus_harrisii
ENSUMAG00000024458	SNAI1	89	57.589	ENSSFOG00015021578	snai1a	86	54.386	Scleropages_formosus
ENSUMAG00000024458	SNAI1	68	62.428	ENSSMAG00000008834	-	52	69.930	Scophthalmus_maximus
ENSUMAG00000024458	SNAI1	89	54.386	ENSSMAG00000019364	snai2	84	55.411	Scophthalmus_maximus
ENSUMAG00000024458	SNAI1	89	56.710	ENSSDUG00000018060	snai2	84	56.277	Seriola_dumerili
ENSUMAG00000024458	SNAI1	89	58.636	ENSSLDG00000012852	snai2	83	57.727	Seriola_lalandi_dorsalis
ENSUMAG00000024458	SNAI1	90	59.825	ENSSPUG00000018057	SNAI1	85	56.444	Sphenodon_punctatus
ENSUMAG00000024458	SNAI1	89	56.710	ENSSPAG00000022061	snai2	84	56.277	Stegastes_partitus
ENSUMAG00000024458	SNAI1	96	96.610	ENSSSCG00000032613	SNAI1	96	95.417	Sus_scrofa
ENSUMAG00000024458	SNAI1	90	60.633	ENSTGUG00000008724	SNAI1	84	60.633	Taeniopygia_guttata
ENSUMAG00000024458	SNAI1	88	53.219	ENSTGUG00000010914	-	86	53.419	Taeniopygia_guttata
ENSUMAG00000024458	SNAI1	89	54.825	ENSTRUG00000025588	snai2	84	55.844	Takifugu_rubripes
ENSUMAG00000024458	SNAI1	89	55.844	ENSTNIG00000008504	snai2	84	56.277	Tetraodon_nigroviridis
ENSUMAG00000024458	SNAI1	78	87.565	ENSTBEG00000012262	SNAI1	99	85.492	Tupaia_belangeri
ENSUMAG00000024458	SNAI1	96	96.186	ENSTTRG00000002029	SNAI1	89	96.186	Tursiops_truncatus
ENSUMAG00000024458	SNAI1	96	94.958	ENSUAMG00000026603	SNAI1	89	94.958	Ursus_americanus
ENSUMAG00000024458	SNAI1	96	99.153	ENSVVUG00000022410	SNAI1	89	99.153	Vulpes_vulpes
ENSUMAG00000024458	SNAI1	93	56.846	ENSXETG00000027366	snai1	87	54.852	Xenopus_tropicalis
ENSUMAG00000024458	SNAI1	89	55.217	ENSXCOG00000015084	snai2	84	55.844	Xiphophorus_couchianus
ENSUMAG00000024458	SNAI1	89	55.217	ENSXMAG00000019030	snai2	84	55.844	Xiphophorus_maculatus