EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000024577 (Gene tree)
Gene ID: 103679993
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 43292 bases
Position: chrKK498806.1:4422489-4465780
Accession: 14099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000034153	Exo_endo_phos	PF03372.23	1.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000040417	CNOT6-201	1755	-	ENSUMAP00000034153	584 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000024577's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000024577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000024577	CNOT6	100	75.514	ENSUMAG00000007955	CNOT6L	99	75.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000024577	CNOT6	100	93.322	ENSG00000113300	CNOT6	100	100.000	Homo_sapiens
ENSUMAG00000024577	CNOT6	100	82.935	ENSAPOG00000009994	cnot6b	100	82.935	Acanthochromis_polyacanthus
ENSUMAG00000024577	CNOT6	100	94.881	ENSAMEG00000000949	CNOT6	99	94.881	Ailuropoda_melanoleuca
ENSUMAG00000024577	CNOT6	100	82.082	ENSACIG00000016566	cnot6b	100	82.082	Amphilophus_citrinellus
ENSUMAG00000024577	CNOT6	100	82.935	ENSAOCG00000006893	cnot6b	100	82.935	Amphiprion_ocellaris
ENSUMAG00000024577	CNOT6	100	82.935	ENSAPEG00000016949	cnot6b	100	82.935	Amphiprion_percula
ENSUMAG00000024577	CNOT6	100	81.058	ENSATEG00000007862	cnot6b	100	81.058	Anabas_testudineus
ENSUMAG00000024577	CNOT6	100	92.123	ENSAPLG00000012715	CNOT6	99	92.123	Anas_platyrhynchos
ENSUMAG00000024577	CNOT6	100	89.555	ENSACAG00000016548	CNOT6	100	89.555	Anolis_carolinensis
ENSUMAG00000024577	CNOT6	100	93.664	ENSANAG00000030436	CNOT6	96	93.664	Aotus_nancymaae
ENSUMAG00000024577	CNOT6	100	81.229	ENSACLG00000008279	cnot6b	100	82.082	Astatotilapia_calliptera
ENSUMAG00000024577	CNOT6	100	81.709	ENSAMXG00000034694	cnot6b	100	81.709	Astyanax_mexicanus
ENSUMAG00000024577	CNOT6	100	82.735	ENSAMXG00000019140	cnot6a	100	82.735	Astyanax_mexicanus
ENSUMAG00000024577	CNOT6	100	94.178	ENSBTAG00000017362	CNOT6	100	94.178	Bos_taurus
ENSUMAG00000024577	CNOT6	100	93.493	ENSCJAG00000009795	CNOT6	100	93.493	Callithrix_jacchus
ENSUMAG00000024577	CNOT6	100	94.863	ENSCAFG00000000464	CNOT6	100	94.863	Canis_familiaris
ENSUMAG00000024577	CNOT6	100	94.863	ENSCAFG00020002441	CNOT6	100	94.863	Canis_lupus_dingo
ENSUMAG00000024577	CNOT6	100	94.007	ENSCHIG00000019100	CNOT6	100	94.007	Capra_hircus
ENSUMAG00000024577	CNOT6	100	91.952	ENSTSYG00000003982	CNOT6	100	91.952	Carlito_syrichta
ENSUMAG00000024577	CNOT6	100	88.356	ENSCPOG00000035657	CNOT6	100	88.356	Cavia_porcellus
ENSUMAG00000024577	CNOT6	100	89.212	ENSCCAG00000033670	CNOT6	100	89.212	Cebus_capucinus
ENSUMAG00000024577	CNOT6	100	93.322	ENSCATG00000042014	CNOT6	100	93.322	Cercocebus_atys
ENSUMAG00000024577	CNOT6	100	91.952	ENSCLAG00000010489	CNOT6	100	91.952	Chinchilla_lanigera
ENSUMAG00000024577	CNOT6	100	93.322	ENSCSAG00000008165	CNOT6	100	93.322	Chlorocebus_sabaeus
ENSUMAG00000024577	CNOT6	100	92.466	ENSCHOG00000009680	CNOT6	100	92.466	Choloepus_hoffmanni
ENSUMAG00000024577	CNOT6	100	91.610	ENSCPBG00000008908	CNOT6	100	91.610	Chrysemys_picta_bellii
ENSUMAG00000024577	CNOT6	100	93.493	ENSCANG00000026756	CNOT6	100	93.493	Colobus_angolensis_palliatus
ENSUMAG00000024577	CNOT6	100	91.952	ENSCGRG00001011452	Cnot6	100	91.952	Cricetulus_griseus_chok1gshd
ENSUMAG00000024577	CNOT6	100	90.068	ENSCGRG00000010407	Cnot6	100	90.068	Cricetulus_griseus_crigri
ENSUMAG00000024577	CNOT6	100	82.253	ENSCSEG00000010939	cnot6b	100	82.253	Cynoglossus_semilaevis
ENSUMAG00000024577	CNOT6	100	81.709	ENSCVAG00000010538	cnot6b	100	81.709	Cyprinodon_variegatus
ENSUMAG00000024577	CNOT6	100	80.171	ENSDARG00000101072	cnot6b	100	80.171	Danio_rerio
ENSUMAG00000024577	CNOT6	100	82.051	ENSDARG00000008255	cnot6a	100	82.051	Danio_rerio
ENSUMAG00000024577	CNOT6	100	93.151	ENSDNOG00000041644	CNOT6	100	93.151	Dasypus_novemcinctus
ENSUMAG00000024577	CNOT6	100	82.705	ENSDORG00000001708	Cnot6	100	82.705	Dipodomys_ordii
ENSUMAG00000024577	CNOT6	100	74.573	ENSETEG00000006975	CNOT6	100	74.573	Echinops_telfairi
ENSUMAG00000024577	CNOT6	100	93.664	ENSEASG00005012794	-	100	93.664	Equus_asinus_asinus
ENSUMAG00000024577	CNOT6	90	88.235	ENSEASG00005012957	-	99	88.235	Equus_asinus_asinus
ENSUMAG00000024577	CNOT6	100	88.356	ENSECAG00000012704	-	99	88.356	Equus_caballus
ENSUMAG00000024577	CNOT6	100	94.349	ENSECAG00000019325	CNOT6	100	94.349	Equus_caballus
ENSUMAG00000024577	CNOT6	100	93.151	ENSEEUG00000015382	CNOT6	100	93.151	Erinaceus_europaeus
ENSUMAG00000024577	CNOT6	100	79.798	ENSELUG00000015981	cnot6b	99	79.798	Esox_lucius
ENSUMAG00000024577	CNOT6	100	78.291	ENSELUG00000024580	cnot6a	100	78.291	Esox_lucius
ENSUMAG00000024577	CNOT6	100	94.863	ENSFCAG00000001881	CNOT6	100	94.863	Felis_catus
ENSUMAG00000024577	CNOT6	100	92.123	ENSFALG00000007699	CNOT6	100	92.123	Ficedula_albicollis
ENSUMAG00000024577	CNOT6	100	91.781	ENSFDAG00000001999	CNOT6	100	91.781	Fukomys_damarensis
ENSUMAG00000024577	CNOT6	62	88.095	ENSFHEG00000013756	cnot6b	94	92.308	Fundulus_heteroclitus
ENSUMAG00000024577	CNOT6	95	81.115	ENSGMOG00000009767	cnot6b	99	81.115	Gadus_morhua
ENSUMAG00000024577	CNOT6	100	92.123	ENSGALG00000034316	CNOT6	100	92.123	Gallus_gallus
ENSUMAG00000024577	CNOT6	100	81.880	ENSGAFG00000008525	cnot6b	100	81.880	Gambusia_affinis
ENSUMAG00000024577	CNOT6	95	79.317	ENSGACG00000018046	cnot6b	99	79.317	Gasterosteus_aculeatus
ENSUMAG00000024577	CNOT6	100	76.541	ENSGAGG00000012176	CNOT6	100	76.541	Gopherus_agassizii
ENSUMAG00000024577	CNOT6	100	93.322	ENSGGOG00000003675	CNOT6	100	93.322	Gorilla_gorilla
ENSUMAG00000024577	CNOT6	100	81.399	ENSHBUG00000002819	cnot6b	100	82.253	Haplochromis_burtoni
ENSUMAG00000024577	CNOT6	100	92.123	ENSHGLG00000017756	CNOT6	100	92.123	Heterocephalus_glaber_female
ENSUMAG00000024577	CNOT6	100	92.123	ENSHGLG00100005747	CNOT6	100	92.123	Heterocephalus_glaber_male
ENSUMAG00000024577	CNOT6	100	80.034	ENSHCOG00000016176	cnot6b	100	80.887	Hippocampus_comes
ENSUMAG00000024577	CNOT6	100	81.709	ENSIPUG00000019831	cnot6a	100	81.709	Ictalurus_punctatus
ENSUMAG00000024577	CNOT6	100	80.855	ENSIPUG00000017482	cnot6b	100	80.855	Ictalurus_punctatus
ENSUMAG00000024577	CNOT6	100	93.151	ENSSTOG00000002803	CNOT6	100	93.151	Ictidomys_tridecemlineatus
ENSUMAG00000024577	CNOT6	100	91.438	ENSJJAG00000012296	Cnot6	100	91.438	Jaculus_jaculus
ENSUMAG00000024577	CNOT6	100	82.735	ENSKMAG00000004640	cnot6b	100	82.735	Kryptolebias_marmoratus
ENSUMAG00000024577	CNOT6	100	80.205	ENSLBEG00000027917	cnot6b	100	81.058	Labrus_bergylta
ENSUMAG00000024577	CNOT6	100	85.983	ENSLOCG00000010102	cnot6b	99	85.983	Lepisosteus_oculatus
ENSUMAG00000024577	CNOT6	100	93.664	ENSLAFG00000016742	CNOT6	100	93.664	Loxodonta_africana
ENSUMAG00000024577	CNOT6	100	93.322	ENSMFAG00000030867	CNOT6	100	93.322	Macaca_fascicularis
ENSUMAG00000024577	CNOT6	100	93.322	ENSMMUG00000018690	CNOT6	100	93.322	Macaca_mulatta
ENSUMAG00000024577	CNOT6	100	93.322	ENSMNEG00000038565	CNOT6	100	93.322	Macaca_nemestrina
ENSUMAG00000024577	CNOT6	100	93.322	ENSMLEG00000010555	CNOT6	100	93.322	Mandrillus_leucophaeus
ENSUMAG00000024577	CNOT6	100	83.106	ENSMAMG00000007515	cnot6b	100	83.106	Mastacembelus_armatus
ENSUMAG00000024577	CNOT6	100	81.229	ENSMZEG00005012899	cnot6b	100	82.082	Maylandia_zebra
ENSUMAG00000024577	CNOT6	100	92.637	ENSMAUG00000019798	Cnot6	100	92.637	Mesocricetus_auratus
ENSUMAG00000024577	CNOT6	100	91.952	ENSMICG00000013018	-	100	91.952	Microcebus_murinus
ENSUMAG00000024577	CNOT6	98	83.538	ENSMICG00000028378	-	99	83.538	Microcebus_murinus
ENSUMAG00000024577	CNOT6	100	92.295	ENSMOCG00000021662	Cnot6	100	92.295	Microtus_ochrogaster
ENSUMAG00000024577	CNOT6	100	80.342	ENSMMOG00000003227	cnot6b	100	80.342	Mola_mola
ENSUMAG00000024577	CNOT6	100	92.295	ENSMODG00000003979	CNOT6	100	92.295	Monodelphis_domestica
ENSUMAG00000024577	CNOT6	100	82.935	ENSMALG00000014251	cnot6b	100	82.935	Monopterus_albus
ENSUMAG00000024577	CNOT6	100	92.466	MGP_CAROLIEiJ_G0016277	Cnot6	100	92.466	Mus_caroli
ENSUMAG00000024577	CNOT6	100	92.466	ENSMUSG00000020362	Cnot6	100	92.466	Mus_musculus
ENSUMAG00000024577	CNOT6	100	92.466	MGP_PahariEiJ_G0017413	Cnot6	100	92.466	Mus_pahari
ENSUMAG00000024577	CNOT6	100	92.466	MGP_SPRETEiJ_G0017122	Cnot6	100	92.466	Mus_spretus
ENSUMAG00000024577	CNOT6	100	94.692	ENSMPUG00000000587	CNOT6	96	94.692	Mustela_putorius_furo
ENSUMAG00000024577	CNOT6	100	91.681	ENSMLUG00000010257	CNOT6	100	91.681	Myotis_lucifugus
ENSUMAG00000024577	CNOT6	100	91.267	ENSNGAG00000008269	Cnot6	100	91.267	Nannospalax_galili
ENSUMAG00000024577	CNOT6	100	81.399	ENSNBRG00000010798	cnot6b	100	82.253	Neolamprologus_brichardi
ENSUMAG00000024577	CNOT6	100	92.466	ENSNLEG00000002322	CNOT6	100	92.466	Nomascus_leucogenys
ENSUMAG00000024577	CNOT6	82	96.262	ENSMEUG00000000025	CNOT6	81	96.262	Notamacropus_eugenii
ENSUMAG00000024577	CNOT6	88	94.286	ENSOPRG00000008244	-	88	94.286	Ochotona_princeps
ENSUMAG00000024577	CNOT6	100	91.096	ENSODEG00000007041	CNOT6	100	91.096	Octodon_degus
ENSUMAG00000024577	CNOT6	77	80.804	ENSONIG00000013027	cnot6b	99	80.804	Oreochromis_niloticus
ENSUMAG00000024577	CNOT6	100	91.096	ENSOANG00000010226	CNOT6	100	91.096	Ornithorhynchus_anatinus
ENSUMAG00000024577	CNOT6	100	92.491	ENSOCUG00000011083	CNOT6	100	92.491	Oryctolagus_cuniculus
ENSUMAG00000024577	CNOT6	100	81.570	ENSORLG00000005059	cnot6b	100	81.570	Oryzias_latipes
ENSUMAG00000024577	CNOT6	100	81.570	ENSORLG00020012784	cnot6b	100	81.570	Oryzias_latipes_hni
ENSUMAG00000024577	CNOT6	94	80.545	ENSORLG00015022658	cnot6b	98	80.545	Oryzias_latipes_hsok
ENSUMAG00000024577	CNOT6	100	81.741	ENSOMEG00000005295	cnot6b	100	81.741	Oryzias_melastigma
ENSUMAG00000024577	CNOT6	94	92.922	ENSOGAG00000032470	CNOT6	100	92.922	Otolemur_garnettii
ENSUMAG00000024577	CNOT6	97	93.673	ENSOARG00000001003	CNOT6	100	93.673	Ovis_aries
ENSUMAG00000024577	CNOT6	100	93.322	ENSPPAG00000032253	CNOT6	100	93.322	Pan_paniscus
ENSUMAG00000024577	CNOT6	100	94.692	ENSPPRG00000011912	CNOT6	100	94.692	Panthera_pardus
ENSUMAG00000024577	CNOT6	100	94.692	ENSPTIG00000016794	CNOT6	100	94.692	Panthera_tigris_altaica
ENSUMAG00000024577	CNOT6	100	93.322	ENSPTRG00000017636	CNOT6	100	93.322	Pan_troglodytes
ENSUMAG00000024577	CNOT6	100	93.322	ENSPANG00000016191	CNOT6	100	93.322	Papio_anubis
ENSUMAG00000024577	CNOT6	100	82.906	ENSPKIG00000021368	cnot6b	100	82.906	Paramormyrops_kingsleyae
ENSUMAG00000024577	CNOT6	98	91.944	ENSPSIG00000017307	CNOT6	100	91.944	Pelodiscus_sinensis
ENSUMAG00000024577	CNOT6	100	81.911	ENSPMGG00000011238	cnot6b	100	81.911	Periophthalmus_magnuspinnatus
ENSUMAG00000024577	CNOT6	100	91.438	ENSPEMG00000000627	Cnot6	100	91.438	Peromyscus_maniculatus_bairdii
ENSUMAG00000024577	CNOT6	100	91.952	ENSPCIG00000020319	CNOT6	99	91.952	Phascolarctos_cinereus
ENSUMAG00000024577	CNOT6	100	81.709	ENSPFOG00000006291	cnot6b	100	81.709	Poecilia_formosa
ENSUMAG00000024577	CNOT6	100	69.717	ENSPLAG00000008266	cnot6b	100	78.462	Poecilia_latipinna
ENSUMAG00000024577	CNOT6	100	81.880	ENSPMEG00000009091	cnot6b	100	81.880	Poecilia_mexicana
ENSUMAG00000024577	CNOT6	100	80.855	ENSPREG00000003713	cnot6b	100	80.855	Poecilia_reticulata
ENSUMAG00000024577	CNOT6	100	93.322	ENSPPYG00000016137	CNOT6	100	93.322	Pongo_abelii
ENSUMAG00000024577	CNOT6	67	96.617	ENSPCAG00000005599	-	71	96.617	Procavia_capensis
ENSUMAG00000024577	CNOT6	100	88.014	ENSPCOG00000017359	CNOT6	100	88.699	Propithecus_coquereli
ENSUMAG00000024577	CNOT6	100	89.041	ENSPVAG00000003069	CNOT6	100	89.041	Pteropus_vampyrus
ENSUMAG00000024577	CNOT6	100	81.058	ENSPNYG00000000321	cnot6b	100	81.911	Pundamilia_nyererei
ENSUMAG00000024577	CNOT6	100	81.538	ENSPNAG00000028816	cnot6b	100	81.538	Pygocentrus_nattereri
ENSUMAG00000024577	CNOT6	100	82.906	ENSPNAG00000029586	cnot6a	100	82.906	Pygocentrus_nattereri
ENSUMAG00000024577	CNOT6	100	91.438	ENSRNOG00000054891	Cnot6	100	91.438	Rattus_norvegicus
ENSUMAG00000024577	CNOT6	100	96.575	ENSRBIG00000004309	CNOT6	100	96.575	Rhinopithecus_bieti
ENSUMAG00000024577	CNOT6	100	96.575	ENSRROG00000035378	CNOT6	100	96.575	Rhinopithecus_roxellana
ENSUMAG00000024577	CNOT6	100	93.493	ENSSBOG00000030494	CNOT6	100	93.493	Saimiri_boliviensis_boliviensis
ENSUMAG00000024577	CNOT6	100	92.123	ENSSHAG00000017436	CNOT6	100	92.123	Sarcophilus_harrisii
ENSUMAG00000024577	CNOT6	100	84.274	ENSSFOG00015015133	CNOT6	100	84.274	Scleropages_formosus
ENSUMAG00000024577	CNOT6	100	82.222	ENSSFOG00015022383	cnot6a	96	82.222	Scleropages_formosus
ENSUMAG00000024577	CNOT6	100	81.058	ENSSMAG00000003084	cnot6b	100	81.058	Scophthalmus_maximus
ENSUMAG00000024577	CNOT6	100	82.594	ENSSDUG00000004151	cnot6b	100	82.594	Seriola_dumerili
ENSUMAG00000024577	CNOT6	100	81.911	ENSSLDG00000004448	cnot6b	100	82.765	Seriola_lalandi_dorsalis
ENSUMAG00000024577	CNOT6	66	72.208	ENSSARG00000012650	-	100	72.208	Sorex_araneus
ENSUMAG00000024577	CNOT6	100	90.925	ENSSPUG00000007893	CNOT6	100	90.925	Sphenodon_punctatus
ENSUMAG00000024577	CNOT6	100	82.765	ENSSPAG00000000149	cnot6b	100	82.765	Stegastes_partitus
ENSUMAG00000024577	CNOT6	100	94.007	ENSSSCG00000014009	CNOT6	100	94.007	Sus_scrofa
ENSUMAG00000024577	CNOT6	100	91.781	ENSTGUG00000001119	CNOT6	100	91.781	Taeniopygia_guttata
ENSUMAG00000024577	CNOT6	100	80.308	ENSTRUG00000002818	cnot6b	100	80.308	Takifugu_rubripes
ENSUMAG00000024577	CNOT6	100	80.651	ENSTNIG00000004443	cnot6b	99	80.651	Tetraodon_nigroviridis
ENSUMAG00000024577	CNOT6	73	94.531	ENSTBEG00000017094	-	88	94.531	Tupaia_belangeri
ENSUMAG00000024577	CNOT6	100	94.178	ENSTTRG00000009363	CNOT6	100	94.178	Tursiops_truncatus
ENSUMAG00000024577	CNOT6	78	93.860	ENSUAMG00000004579	CNOT6	88	93.860	Ursus_americanus
ENSUMAG00000024577	CNOT6	84	94.595	ENSVPAG00000003593	CNOT6	83	94.595	Vicugna_pacos
ENSUMAG00000024577	CNOT6	100	94.863	ENSVVUG00000026940	CNOT6	100	94.863	Vulpes_vulpes
ENSUMAG00000024577	CNOT6	100	70.050	ENSXCOG00000003360	cnot6b	100	78.803	Xiphophorus_couchianus
ENSUMAG00000024577	CNOT6	100	81.880	ENSXMAG00000008730	cnot6b	100	81.880	Xiphophorus_maculatus