EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000024957 (Gene tree)
Gene ID: 103680536
Gene Symbol: CRNKL1
Alias: -
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 15404 bases
Position: chrKK499007.1:4751174-4766577
Accession: 103680536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000034670	HAT	PF02184.16	1e-42	1	2
ENSUMAP00000034670	HAT	PF02184.16	1e-42	2	2
ENSUMAP00000034668	HAT	PF02184.16	2.4e-42	1	2
ENSUMAP00000034668	HAT	PF02184.16	2.4e-42	2	2
ENSUMAP00000034669	HAT	PF02184.16	1.8e-35	1	2
ENSUMAP00000034669	HAT	PF02184.16	1.8e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000041015	CRNKL1-203	2410	-	ENSUMAP00000034670	649 (aa)	-	-
ENSUMAT00000041014	CRNKL1-202	1922	-	ENSUMAP00000034669	607 (aa)	-	-
ENSUMAT00000041013	CRNKL1-201	2162	XM_008710041	ENSUMAP00000034668	687 (aa)	XP_008708263	UPI0004DFFD1B

Gene Model

Click here to download ENSUMAG00000024957's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000024957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000024957	CRNKL1	100	97.089	ENSG00000101343	CRNKL1	100	97.089	Homo_sapiens
ENSUMAG00000024957	CRNKL1	99	86.569	ENSAPOG00000009705	crnkl1	97	86.519	Acanthochromis_polyacanthus
ENSUMAG00000024957	CRNKL1	100	100.000	ENSAMEG00000000270	CRNKL1	83	100.000	Ailuropoda_melanoleuca
ENSUMAG00000024957	CRNKL1	98	86.647	ENSACIG00000015267	crnkl1	89	86.647	Amphilophus_citrinellus
ENSUMAG00000024957	CRNKL1	99	86.715	ENSAOCG00000021964	crnkl1	91	86.715	Amphiprion_ocellaris
ENSUMAG00000024957	CRNKL1	99	86.569	ENSAPEG00000015041	crnkl1	91	86.569	Amphiprion_percula
ENSUMAG00000024957	CRNKL1	99	86.618	ENSATEG00000001068	crnkl1	89	86.618	Anabas_testudineus
ENSUMAG00000024957	CRNKL1	99	90.975	ENSAPLG00000013105	CRNKL1	99	90.975	Anas_platyrhynchos
ENSUMAG00000024957	CRNKL1	99	93.119	ENSACAG00000005284	CRNKL1	99	93.119	Anolis_carolinensis
ENSUMAG00000024957	CRNKL1	97	97.943	ENSANAG00000024889	CRNKL1	100	97.943	Aotus_nancymaae
ENSUMAG00000024957	CRNKL1	99	87.740	ENSACLG00000010813	crnkl1	90	87.740	Astatotilapia_calliptera
ENSUMAG00000024957	CRNKL1	97	88.102	ENSAMXG00000018334	crnkl1	92	86.131	Astyanax_mexicanus
ENSUMAG00000024957	CRNKL1	100	98.399	ENSBTAG00000008472	CRNKL1	99	98.399	Bos_taurus
ENSUMAG00000024957	CRNKL1	94	62.520	WBGene00019762	M03F8.3	92	61.248	Caenorhabditis_elegans
ENSUMAG00000024957	CRNKL1	100	97.234	ENSCJAG00000005393	CRNKL1	100	97.234	Callithrix_jacchus
ENSUMAG00000024957	CRNKL1	100	99.709	ENSCAFG00000005333	CRNKL1	94	99.709	Canis_familiaris
ENSUMAG00000024957	CRNKL1	100	99.709	ENSCAFG00020027488	CRNKL1	100	99.709	Canis_lupus_dingo
ENSUMAG00000024957	CRNKL1	100	97.234	ENSCHIG00000013171	CRNKL1	99	97.234	Capra_hircus
ENSUMAG00000024957	CRNKL1	100	98.253	ENSTSYG00000004197	CRNKL1	100	98.253	Carlito_syrichta
ENSUMAG00000024957	CRNKL1	95	96.284	ENSCAPG00000010501	CRNKL1	99	96.284	Cavia_aperea
ENSUMAG00000024957	CRNKL1	100	96.507	ENSCPOG00000004418	CRNKL1	100	96.507	Cavia_porcellus
ENSUMAG00000024957	CRNKL1	100	97.234	ENSCCAG00000027037	CRNKL1	100	97.234	Cebus_capucinus
ENSUMAG00000024957	CRNKL1	100	97.380	ENSCATG00000034247	CRNKL1	100	97.380	Cercocebus_atys
ENSUMAG00000024957	CRNKL1	100	97.234	ENSCLAG00000013859	CRNKL1	100	97.234	Chinchilla_lanigera
ENSUMAG00000024957	CRNKL1	100	97.380	ENSCSAG00000011434	CRNKL1	100	97.380	Chlorocebus_sabaeus
ENSUMAG00000024957	CRNKL1	100	99.127	ENSCHOG00000006371	CRNKL1	84	99.127	Choloepus_hoffmanni
ENSUMAG00000024957	CRNKL1	99	94.161	ENSCPBG00000023501	CRNKL1	99	94.161	Chrysemys_picta_bellii
ENSUMAG00000024957	CRNKL1	97	69.048	ENSCING00000002709	-	99	67.982	Ciona_intestinalis
ENSUMAG00000024957	CRNKL1	100	97.525	ENSCANG00000038789	CRNKL1	100	97.525	Colobus_angolensis_palliatus
ENSUMAG00000024957	CRNKL1	100	98.108	ENSCGRG00001000687	-	99	98.108	Cricetulus_griseus_chok1gshd
ENSUMAG00000024957	CRNKL1	100	98.108	ENSCGRG00001001115	-	99	98.108	Cricetulus_griseus_chok1gshd
ENSUMAG00000024957	CRNKL1	100	98.108	ENSCGRG00000007854	Crnkl1	99	98.108	Cricetulus_griseus_crigri
ENSUMAG00000024957	CRNKL1	98	86.370	ENSCSEG00000005594	crnkl1	86	86.370	Cynoglossus_semilaevis
ENSUMAG00000024957	CRNKL1	97	87.688	ENSCVAG00000015172	crnkl1	92	85.693	Cyprinodon_variegatus
ENSUMAG00000024957	CRNKL1	97	86.667	ENSDARG00000007901	crnkl1	90	85.819	Danio_rerio
ENSUMAG00000024957	CRNKL1	99	99.123	ENSDNOG00000016226	CRNKL1	95	99.123	Dasypus_novemcinctus
ENSUMAG00000024957	CRNKL1	100	96.681	ENSDORG00000000394	-	100	96.681	Dipodomys_ordii
ENSUMAG00000024957	CRNKL1	97	88.766	ENSDORG00000023724	-	99	88.507	Dipodomys_ordii
ENSUMAG00000024957	CRNKL1	97	88.291	ENSDORG00000030174	-	99	88.060	Dipodomys_ordii
ENSUMAG00000024957	CRNKL1	97	69.083	FBgn0000377	crn	95	69.670	Drosophila_melanogaster
ENSUMAG00000024957	CRNKL1	100	89.433	ENSETEG00000003711	CRNKL1	84	85.590	Echinops_telfairi
ENSUMAG00000024957	CRNKL1	99	61.155	ENSEBUG00000013461	crnkl1	96	58.419	Eptatretus_burgeri
ENSUMAG00000024957	CRNKL1	100	99.709	ENSEASG00005002072	CRNKL1	100	99.709	Equus_asinus_asinus
ENSUMAG00000024957	CRNKL1	100	99.709	ENSECAG00000022215	CRNKL1	100	99.709	Equus_caballus
ENSUMAG00000024957	CRNKL1	100	96.507	ENSEEUG00000000413	CRNKL1	92	96.507	Erinaceus_europaeus
ENSUMAG00000024957	CRNKL1	98	86.119	ENSELUG00000015424	crnkl1	97	85.007	Esox_lucius
ENSUMAG00000024957	CRNKL1	100	100.000	ENSFCAG00000000714	CRNKL1	100	100.000	Felis_catus
ENSUMAG00000024957	CRNKL1	98	92.113	ENSFALG00000004611	CRNKL1	100	92.113	Ficedula_albicollis
ENSUMAG00000024957	CRNKL1	100	97.380	ENSFDAG00000000604	CRNKL1	100	97.380	Fukomys_damarensis
ENSUMAG00000024957	CRNKL1	98	86.776	ENSFHEG00000013163	crnkl1	88	86.776	Fundulus_heteroclitus
ENSUMAG00000024957	CRNKL1	97	86.228	ENSGMOG00000007609	crnkl1	94	84.694	Gadus_morhua
ENSUMAG00000024957	CRNKL1	99	94.015	ENSGALG00000008429	CRNKL1	99	94.015	Gallus_gallus
ENSUMAG00000024957	CRNKL1	97	87.237	ENSGAFG00000014249	crnkl1	90	85.547	Gambusia_affinis
ENSUMAG00000024957	CRNKL1	99	85.234	ENSGACG00000011852	crnkl1	91	85.234	Gasterosteus_aculeatus
ENSUMAG00000024957	CRNKL1	95	92.835	ENSGAGG00000021233	CRNKL1	100	93.085	Gopherus_agassizii
ENSUMAG00000024957	CRNKL1	100	97.089	ENSGGOG00000014176	CRNKL1	100	97.089	Gorilla_gorilla
ENSUMAG00000024957	CRNKL1	99	87.592	ENSHBUG00000005246	crnkl1	90	87.592	Haplochromis_burtoni
ENSUMAG00000024957	CRNKL1	100	97.234	ENSHGLG00000010856	CRNKL1	100	97.234	Heterocephalus_glaber_female
ENSUMAG00000024957	CRNKL1	100	97.234	ENSHGLG00100011521	CRNKL1	100	97.234	Heterocephalus_glaber_male
ENSUMAG00000024957	CRNKL1	97	84.708	ENSHCOG00000006420	crnkl1	98	83.284	Hippocampus_comes
ENSUMAG00000024957	CRNKL1	97	76.241	ENSIPUG00000006836	-	99	75.444	Ictalurus_punctatus
ENSUMAG00000024957	CRNKL1	98	68.711	ENSIPUG00000000315	-	100	70.126	Ictalurus_punctatus
ENSUMAG00000024957	CRNKL1	95	87.317	ENSIPUG00000006751	crnkl1	93	85.970	Ictalurus_punctatus
ENSUMAG00000024957	CRNKL1	100	98.544	ENSSTOG00000014747	CRNKL1	100	98.544	Ictidomys_tridecemlineatus
ENSUMAG00000024957	CRNKL1	100	96.302	ENSJJAG00000016926	Crnkl1	100	96.302	Jaculus_jaculus
ENSUMAG00000024957	CRNKL1	99	86.657	ENSKMAG00000003620	crnkl1	86	86.657	Kryptolebias_marmoratus
ENSUMAG00000024957	CRNKL1	97	77.796	ENSLBEG00000003543	crnkl1	92	76.499	Labrus_bergylta
ENSUMAG00000024957	CRNKL1	99	88.141	ENSLACG00000001129	CRNKL1	99	88.141	Latimeria_chalumnae
ENSUMAG00000024957	CRNKL1	97	89.458	ENSLOCG00000016889	crnkl1	95	88.012	Lepisosteus_oculatus
ENSUMAG00000024957	CRNKL1	100	98.983	ENSLAFG00000004512	CRNKL1	100	98.983	Loxodonta_africana
ENSUMAG00000024957	CRNKL1	100	97.380	ENSMFAG00000039893	CRNKL1	100	97.380	Macaca_fascicularis
ENSUMAG00000024957	CRNKL1	100	97.380	ENSMMUG00000007709	CRNKL1	100	97.380	Macaca_mulatta
ENSUMAG00000024957	CRNKL1	100	97.380	ENSMNEG00000037490	CRNKL1	100	97.380	Macaca_nemestrina
ENSUMAG00000024957	CRNKL1	100	97.380	ENSMLEG00000034885	CRNKL1	100	97.380	Mandrillus_leucophaeus
ENSUMAG00000024957	CRNKL1	99	86.277	ENSMAMG00000008757	crnkl1	90	86.277	Mastacembelus_armatus
ENSUMAG00000024957	CRNKL1	99	87.740	ENSMZEG00005022345	crnkl1	90	87.740	Maylandia_zebra
ENSUMAG00000024957	CRNKL1	99	93.294	ENSMGAG00000003452	CRNKL1	94	93.294	Meleagris_gallopavo
ENSUMAG00000024957	CRNKL1	100	97.962	ENSMAUG00000020764	Crnkl1	99	97.962	Mesocricetus_auratus
ENSUMAG00000024957	CRNKL1	100	98.690	ENSMICG00000006048	CRNKL1	100	98.690	Microcebus_murinus
ENSUMAG00000024957	CRNKL1	100	89.986	ENSMOCG00000000681	-	99	89.986	Microtus_ochrogaster
ENSUMAG00000024957	CRNKL1	97	69.520	ENSMOCG00000004179	-	96	69.733	Microtus_ochrogaster
ENSUMAG00000024957	CRNKL1	98	86.278	ENSMMOG00000017601	crnkl1	97	86.278	Mola_mola
ENSUMAG00000024957	CRNKL1	100	86.900	ENSMODG00000010857	-	99	86.900	Monodelphis_domestica
ENSUMAG00000024957	CRNKL1	100	93.103	ENSMODG00000005961	-	99	93.103	Monodelphis_domestica
ENSUMAG00000024957	CRNKL1	98	63.722	ENSMALG00000011211	crnkl1	89	63.583	Monopterus_albus
ENSUMAG00000024957	CRNKL1	100	98.544	MGP_CAROLIEiJ_G0024394	Crnkl1	99	98.544	Mus_caroli
ENSUMAG00000024957	CRNKL1	100	98.690	ENSMUSG00000001767	Crnkl1	99	98.690	Mus_musculus
ENSUMAG00000024957	CRNKL1	100	96.652	MGP_PahariEiJ_G0025838	Crnkl1	99	96.652	Mus_pahari
ENSUMAG00000024957	CRNKL1	100	98.544	MGP_SPRETEiJ_G0025312	Crnkl1	99	98.544	Mus_spretus
ENSUMAG00000024957	CRNKL1	100	99.854	ENSMPUG00000001226	CRNKL1	100	99.854	Mustela_putorius_furo
ENSUMAG00000024957	CRNKL1	100	98.837	ENSMLUG00000016513	CRNKL1	89	98.837	Myotis_lucifugus
ENSUMAG00000024957	CRNKL1	100	96.143	ENSNGAG00000023097	Crnkl1	100	96.143	Nannospalax_galili
ENSUMAG00000024957	CRNKL1	99	87.888	ENSNBRG00000007867	crnkl1	89	87.888	Neolamprologus_brichardi
ENSUMAG00000024957	CRNKL1	100	93.741	ENSNLEG00000009862	CRNKL1	100	93.741	Nomascus_leucogenys
ENSUMAG00000024957	CRNKL1	100	86.192	ENSMEUG00000002361	-	99	86.192	Notamacropus_eugenii
ENSUMAG00000024957	CRNKL1	98	96.119	ENSMEUG00000012167	-	100	96.119	Notamacropus_eugenii
ENSUMAG00000024957	CRNKL1	74	69.583	ENSOPRG00000009242	-	61	67.568	Ochotona_princeps
ENSUMAG00000024957	CRNKL1	100	97.089	ENSODEG00000012175	CRNKL1	100	97.089	Octodon_degus
ENSUMAG00000024957	CRNKL1	99	88.183	ENSONIG00000018728	crnkl1	89	88.183	Oreochromis_niloticus
ENSUMAG00000024957	CRNKL1	99	98.251	ENSOCUG00000015484	CRNKL1	83	98.251	Oryctolagus_cuniculus
ENSUMAG00000024957	CRNKL1	99	84.088	ENSORLG00000017240	crnkl1	96	80.725	Oryzias_latipes
ENSUMAG00000024957	CRNKL1	97	86.186	ENSORLG00020001742	crnkl1	89	86.186	Oryzias_latipes_hni
ENSUMAG00000024957	CRNKL1	99	84.234	ENSORLG00015019564	crnkl1	89	86.186	Oryzias_latipes_hsok
ENSUMAG00000024957	CRNKL1	99	85.109	ENSOMEG00000019895	crnkl1	91	85.109	Oryzias_melastigma
ENSUMAG00000024957	CRNKL1	100	97.671	ENSOGAG00000011544	CRNKL1	100	97.671	Otolemur_garnettii
ENSUMAG00000024957	CRNKL1	100	98.399	ENSOARG00000002150	CRNKL1	89	98.399	Ovis_aries
ENSUMAG00000024957	CRNKL1	99	95.735	ENSPPAG00000027847	CRNKL1	83	95.779	Pan_paniscus
ENSUMAG00000024957	CRNKL1	100	100.000	ENSPPRG00000001955	CRNKL1	100	100.000	Panthera_pardus
ENSUMAG00000024957	CRNKL1	100	100.000	ENSPTIG00000007393	CRNKL1	100	100.000	Panthera_tigris_altaica
ENSUMAG00000024957	CRNKL1	100	96.943	ENSPTRG00000030609	CRNKL1	100	96.943	Pan_troglodytes
ENSUMAG00000024957	CRNKL1	100	97.380	ENSPANG00000017420	CRNKL1	100	97.380	Papio_anubis
ENSUMAG00000024957	CRNKL1	97	82.492	ENSPKIG00000017093	crnkl1	89	82.258	Paramormyrops_kingsleyae
ENSUMAG00000024957	CRNKL1	99	92.972	ENSPSIG00000012705	CRNKL1	99	92.972	Pelodiscus_sinensis
ENSUMAG00000024957	CRNKL1	99	79.912	ENSPMGG00000006263	crnkl1	96	79.676	Periophthalmus_magnuspinnatus
ENSUMAG00000024957	CRNKL1	100	98.108	ENSPEMG00000000073	-	99	98.108	Peromyscus_maniculatus_bairdii
ENSUMAG00000024957	CRNKL1	99	82.413	ENSPMAG00000002250	crnkl1	99	82.413	Petromyzon_marinus
ENSUMAG00000024957	CRNKL1	100	95.488	ENSPCIG00000025825	CRNKL1	96	95.488	Phascolarctos_cinereus
ENSUMAG00000024957	CRNKL1	97	87.087	ENSPFOG00000005102	crnkl1	93	85.174	Poecilia_formosa
ENSUMAG00000024957	CRNKL1	97	87.087	ENSPLAG00000007288	crnkl1	90	85.051	Poecilia_latipinna
ENSUMAG00000024957	CRNKL1	97	87.237	ENSPMEG00000008865	crnkl1	93	85.320	Poecilia_mexicana
ENSUMAG00000024957	CRNKL1	97	86.787	ENSPREG00000012615	crnkl1	92	84.942	Poecilia_reticulata
ENSUMAG00000024957	CRNKL1	100	97.380	ENSPPYG00000010747	CRNKL1	81	97.380	Pongo_abelii
ENSUMAG00000024957	CRNKL1	99	93.088	ENSPCAG00000003296	CRNKL1	85	93.159	Procavia_capensis
ENSUMAG00000024957	CRNKL1	100	97.380	ENSPCOG00000017608	CRNKL1	83	97.380	Propithecus_coquereli
ENSUMAG00000024957	CRNKL1	100	99.272	ENSPVAG00000006207	CRNKL1	83	99.272	Pteropus_vampyrus
ENSUMAG00000024957	CRNKL1	99	87.592	ENSPNYG00000001977	crnkl1	90	87.592	Pundamilia_nyererei
ENSUMAG00000024957	CRNKL1	98	88.657	ENSPNAG00000001507	crnkl1	98	83.988	Pygocentrus_nattereri
ENSUMAG00000024957	CRNKL1	100	98.690	ENSRNOG00000010587	Crnkl1	99	98.690	Rattus_norvegicus
ENSUMAG00000024957	CRNKL1	100	98.253	ENSRNOG00000040045	Crnkl1	99	98.253	Rattus_norvegicus
ENSUMAG00000024957	CRNKL1	100	97.234	ENSRBIG00000031770	CRNKL1	100	97.234	Rhinopithecus_bieti
ENSUMAG00000024957	CRNKL1	100	97.089	ENSRROG00000040450	CRNKL1	100	97.089	Rhinopithecus_roxellana
ENSUMAG00000024957	CRNKL1	95	37.805	YLR117C	CLF1	99	37.916	Saccharomyces_cerevisiae
ENSUMAG00000024957	CRNKL1	100	97.234	ENSSBOG00000029672	CRNKL1	100	97.234	Saimiri_boliviensis_boliviensis
ENSUMAG00000024957	CRNKL1	96	75.040	ENSSHAG00000011199	CRNKL1	99	74.810	Sarcophilus_harrisii
ENSUMAG00000024957	CRNKL1	97	87.797	ENSSFOG00015000946	crnkl1	89	86.257	Scleropages_formosus
ENSUMAG00000024957	CRNKL1	99	85.359	ENSSMAG00000007933	crnkl1	87	86.587	Scophthalmus_maximus
ENSUMAG00000024957	CRNKL1	99	79.738	ENSSDUG00000012625	crnkl1	87	80.412	Seriola_dumerili
ENSUMAG00000024957	CRNKL1	99	87.168	ENSSLDG00000021413	crnkl1	88	87.168	Seriola_lalandi_dorsalis
ENSUMAG00000024957	CRNKL1	100	98.544	ENSSARG00000006443	CRNKL1	82	98.544	Sorex_araneus
ENSUMAG00000024957	CRNKL1	99	93.411	ENSSPUG00000005254	CRNKL1	99	93.411	Sphenodon_punctatus
ENSUMAG00000024957	CRNKL1	97	88.138	ENSSPAG00000016150	crnkl1	86	88.138	Stegastes_partitus
ENSUMAG00000024957	CRNKL1	100	99.709	ENSSSCG00000038587	CRNKL1	99	99.709	Sus_scrofa
ENSUMAG00000024957	CRNKL1	99	92.711	ENSTGUG00000007645	CRNKL1	98	92.711	Taeniopygia_guttata
ENSUMAG00000024957	CRNKL1	98	81.045	ENSTRUG00000015417	crnkl1	90	80.412	Takifugu_rubripes
ENSUMAG00000024957	CRNKL1	97	85.607	ENSTNIG00000010710	crnkl1	99	84.257	Tetraodon_nigroviridis
ENSUMAG00000024957	CRNKL1	97	97.468	ENSTBEG00000001304	CRNKL1	82	97.468	Tupaia_belangeri
ENSUMAG00000024957	CRNKL1	96	94.880	ENSTTRG00000000484	CRNKL1	81	94.937	Tursiops_truncatus
ENSUMAG00000024957	CRNKL1	100	100.000	ENSUAMG00000018586	CRNKL1	100	100.000	Ursus_americanus
ENSUMAG00000024957	CRNKL1	100	99.709	ENSVVUG00000012559	CRNKL1	82	99.709	Vulpes_vulpes
ENSUMAG00000024957	CRNKL1	99	91.121	ENSXETG00000009698	crnkl1	99	91.121	Xenopus_tropicalis
ENSUMAG00000024957	CRNKL1	97	86.357	ENSXCOG00000000824	crnkl1	91	84.627	Xiphophorus_couchianus
ENSUMAG00000024957	CRNKL1	97	87.237	ENSXMAG00000006896	crnkl1	91	85.484	Xiphophorus_maculatus