EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000025481 (Gene tree)
Gene ID: 103680755
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 15723 bases
Position: chrKK499097.1:2182031-2197753
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000035468	Utp12	PF04003.12	2.3e-20	1	1
ENSUMAP00000035467	Utp12	PF04003.12	2.3e-20	1	1
ENSUMAP00000035465	Utp12	PF04003.12	2.4e-20	1	1
ENSUMAP00000035464	Utp12	PF04003.12	6.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000041955	-	2715	-	ENSUMAP00000035464	904 (aa)	-	-
ENSUMAT00000041956	-	2679	-	ENSUMAP00000035465	892 (aa)	-	-
ENSUMAT00000041958	-	2553	-	ENSUMAP00000035467	850 (aa)	-	-
ENSUMAT00000041959	-	2511	-	ENSUMAP00000035468	836 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000025481's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000025481's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000025481	-	50	30.508	ENSUMAG00000021482	POC1A	69	30.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000025481	-	99	84.934	ENSG00000241945	PWP2	99	84.934	Homo_sapiens
ENSUMAG00000025481	-	96	70.408	ENSAPOG00000021522	pwp2h	96	70.442	Acanthochromis_polyacanthus
ENSUMAG00000025481	-	98	93.778	ENSAMEG00000010907	-	99	93.311	Ailuropoda_melanoleuca
ENSUMAG00000025481	-	96	70.270	ENSACIG00000024109	pwp2h	96	70.304	Amphilophus_citrinellus
ENSUMAG00000025481	-	96	69.921	ENSAOCG00000014853	pwp2h	97	69.955	Amphiprion_ocellaris
ENSUMAG00000025481	-	96	69.694	ENSAPEG00000008152	pwp2h	97	69.728	Amphiprion_percula
ENSUMAG00000025481	-	96	69.040	ENSATEG00000015493	pwp2h	99	69.106	Anabas_testudineus
ENSUMAG00000025481	-	96	74.237	ENSAPLG00000010371	-	96	73.756	Anas_platyrhynchos
ENSUMAG00000025481	-	98	71.681	ENSACAG00000017861	-	96	72.398	Anolis_carolinensis
ENSUMAG00000025481	-	99	84.498	ENSANAG00000034845	-	99	84.170	Aotus_nancymaae
ENSUMAG00000025481	-	96	69.629	ENSACLG00000011425	pwp2h	96	69.663	Astatotilapia_calliptera
ENSUMAG00000025481	-	98	66.921	ENSAMXG00000007988	pwp2h	96	67.111	Astyanax_mexicanus
ENSUMAG00000025481	-	99	88.767	ENSBTAG00000007105	-	98	88.877	Bos_taurus
ENSUMAG00000025481	-	95	37.008	WBGene00018891	F55F8.3	96	36.726	Caenorhabditis_elegans
ENSUMAG00000025481	-	99	84.044	ENSCJAG00000005570	-	99	83.825	Callithrix_jacchus
ENSUMAG00000025481	-	98	90.788	ENSCAFG00000010687	-	99	90.710	Canis_familiaris
ENSUMAG00000025481	-	82	90.957	ENSCAFG00020019199	-	90	90.862	Canis_lupus_dingo
ENSUMAG00000025481	-	99	83.080	ENSCHIG00000026362	-	99	83.532	Capra_hircus
ENSUMAG00000025481	-	99	85.872	ENSTSYG00000009022	-	99	85.872	Carlito_syrichta
ENSUMAG00000025481	-	99	84.245	ENSCAPG00000017934	-	100	83.587	Cavia_aperea
ENSUMAG00000025481	-	99	83.605	ENSCPOG00000023616	-	99	83.388	Cavia_porcellus
ENSUMAG00000025481	-	99	84.498	ENSCCAG00000034616	-	99	84.170	Cebus_capucinus
ENSUMAG00000025481	-	99	85.714	ENSCATG00000032550	-	99	85.714	Cercocebus_atys
ENSUMAG00000025481	-	99	84.123	ENSCLAG00000009503	-	99	84.564	Chinchilla_lanigera
ENSUMAG00000025481	-	99	85.385	ENSCSAG00000007903	-	99	85.385	Chlorocebus_sabaeus
ENSUMAG00000025481	-	96	74.634	ENSCPBG00000018335	-	97	74.548	Chrysemys_picta_bellii
ENSUMAG00000025481	-	98	54.009	ENSCSAVG00000004186	-	97	54.702	Ciona_savignyi
ENSUMAG00000025481	-	99	85.809	ENSCANG00000028013	-	99	85.919	Colobus_angolensis_palliatus
ENSUMAG00000025481	-	98	84.251	ENSCGRG00001020074	Pwp2	98	84.251	Cricetulus_griseus_chok1gshd
ENSUMAG00000025481	-	98	84.251	ENSCGRG00000003750	Pwp2	98	84.251	Cricetulus_griseus_crigri
ENSUMAG00000025481	-	96	69.205	ENSCSEG00000000861	pwp2h	96	69.240	Cynoglossus_semilaevis
ENSUMAG00000025481	-	96	69.457	ENSCVAG00000000996	pwp2h	97	69.457	Cyprinodon_variegatus
ENSUMAG00000025481	-	97	65.088	ENSDARG00000037109	pwp2h	96	65.033	Danio_rerio
ENSUMAG00000025481	-	87	82.309	ENSDNOG00000012128	-	99	82.434	Dasypus_novemcinctus
ENSUMAG00000025481	-	95	78.791	ENSDORG00000003015	Pwp2	95	78.791	Dipodomys_ordii
ENSUMAG00000025481	-	99	44.979	FBgn0033557	CG12325	95	45.364	Drosophila_melanogaster
ENSUMAG00000025481	-	85	61.923	ENSEBUG00000003140	pwp2h	95	61.923	Eptatretus_burgeri
ENSUMAG00000025481	-	97	89.186	ENSEASG00005001651	-	98	88.743	Equus_asinus_asinus
ENSUMAG00000025481	-	97	89.521	ENSECAG00000006090	-	98	89.290	Equus_caballus
ENSUMAG00000025481	-	98	67.514	ENSELUG00000001878	pwp2h	96	68.243	Esox_lucius
ENSUMAG00000025481	-	99	90.372	ENSFCAG00000004487	-	99	90.700	Felis_catus
ENSUMAG00000025481	-	98	72.697	ENSFALG00000012300	-	96	73.469	Ficedula_albicollis
ENSUMAG00000025481	-	98	84.053	ENSFDAG00000016140	-	99	83.885	Fukomys_damarensis
ENSUMAG00000025481	-	93	69.616	ENSFHEG00000009078	pwp2h	99	69.849	Fundulus_heteroclitus
ENSUMAG00000025481	-	96	68.523	ENSGMOG00000016522	pwp2h	96	68.778	Gadus_morhua
ENSUMAG00000025481	-	98	73.171	ENSGALG00000045726	-	97	73.553	Gallus_gallus
ENSUMAG00000025481	-	98	67.724	ENSGAFG00000011340	pwp2h	97	69.673	Gambusia_affinis
ENSUMAG00000025481	-	96	68.100	ENSGACG00000014928	pwp2h	99	67.389	Gasterosteus_aculeatus
ENSUMAG00000025481	-	98	74.333	ENSGAGG00000005377	-	97	74.887	Gopherus_agassizii
ENSUMAG00000025481	-	99	84.406	ENSGGOG00000041875	-	99	84.515	Gorilla_gorilla
ENSUMAG00000025481	-	96	69.854	ENSHBUG00000005530	pwp2h	96	69.888	Haplochromis_burtoni
ENSUMAG00000025481	-	99	82.690	ENSHGLG00000017401	-	99	82.470	Heterocephalus_glaber_female
ENSUMAG00000025481	-	99	82.470	ENSHGLG00100013888	-	99	82.249	Heterocephalus_glaber_male
ENSUMAG00000025481	-	97	66.293	ENSHCOG00000018121	pwp2h	95	66.591	Hippocampus_comes
ENSUMAG00000025481	-	97	66.046	ENSIPUG00000014074	pwp2h	96	66.555	Ictalurus_punctatus
ENSUMAG00000025481	-	98	83.536	ENSSTOG00000014194	-	98	83.536	Ictidomys_tridecemlineatus
ENSUMAG00000025481	-	99	84.389	ENSJJAG00000013039	Pwp2	99	84.389	Jaculus_jaculus
ENSUMAG00000025481	-	96	69.526	ENSKMAG00000003143	pwp2h	97	69.865	Kryptolebias_marmoratus
ENSUMAG00000025481	-	99	66.812	ENSLBEG00000006388	pwp2h	96	68.849	Labrus_bergylta
ENSUMAG00000025481	-	93	71.114	ENSLACG00000006084	pwp2h	97	71.210	Latimeria_chalumnae
ENSUMAG00000025481	-	97	68.722	ENSLOCG00000003663	pwp2h	95	68.672	Lepisosteus_oculatus
ENSUMAG00000025481	-	93	86.247	ENSLAFG00000003871	-	99	86.364	Loxodonta_africana
ENSUMAG00000025481	-	99	85.385	ENSMFAG00000044448	-	99	85.385	Macaca_fascicularis
ENSUMAG00000025481	-	99	85.385	ENSMMUG00000005271	PWP2	99	85.385	Macaca_mulatta
ENSUMAG00000025481	-	99	85.495	ENSMNEG00000030782	-	99	85.495	Macaca_nemestrina
ENSUMAG00000025481	-	99	85.495	ENSMLEG00000039860	-	99	85.495	Mandrillus_leucophaeus
ENSUMAG00000025481	-	96	69.379	ENSMAMG00000022327	pwp2h	96	69.413	Mastacembelus_armatus
ENSUMAG00000025481	-	96	69.516	ENSMZEG00005015448	pwp2h	96	69.551	Maylandia_zebra
ENSUMAG00000025481	-	98	65.170	ENSMGAG00000014596	-	96	65.766	Meleagris_gallopavo
ENSUMAG00000025481	-	90	73.529	ENSMAUG00000020265	Pwp2	91	72.727	Mesocricetus_auratus
ENSUMAG00000025481	-	99	85.793	ENSMICG00000001002	-	99	86.129	Microcebus_murinus
ENSUMAG00000025481	-	98	84.675	ENSMOCG00000003844	Pwp2	98	84.675	Microtus_ochrogaster
ENSUMAG00000025481	-	95	68.714	ENSMMOG00000000882	pwp2h	100	69.056	Mola_mola
ENSUMAG00000025481	-	98	77.323	ENSMODG00000021081	-	97	78.241	Monodelphis_domestica
ENSUMAG00000025481	-	97	69.274	ENSMALG00000000821	pwp2h	96	69.752	Monopterus_albus
ENSUMAG00000025481	-	98	84.164	MGP_CAROLIEiJ_G0015505	Pwp2	98	84.275	Mus_caroli
ENSUMAG00000025481	-	98	84.513	ENSMUSG00000032834	Pwp2	98	84.513	Mus_musculus
ENSUMAG00000025481	-	98	84.403	MGP_PahariEiJ_G0030918	Pwp2	98	84.292	Mus_pahari
ENSUMAG00000025481	-	98	84.513	MGP_SPRETEiJ_G0016318	Pwp2	98	84.513	Mus_spretus
ENSUMAG00000025481	-	87	90.966	ENSMPUG00000009936	-	99	91.217	Mustela_putorius_furo
ENSUMAG00000025481	-	98	83.138	ENSMLUG00000004823	-	99	83.006	Myotis_lucifugus
ENSUMAG00000025481	-	98	85.825	ENSNGAG00000021106	Pwp2	98	85.825	Nannospalax_galili
ENSUMAG00000025481	-	96	68.992	ENSNBRG00000016527	pwp2h	96	69.103	Neolamprologus_brichardi
ENSUMAG00000025481	-	96	85.102	ENSNLEG00000001928	-	99	85.102	Nomascus_leucogenys
ENSUMAG00000025481	-	99	83.680	ENSODEG00000013073	-	99	83.790	Octodon_degus
ENSUMAG00000025481	-	96	69.326	ENSONIG00000007136	pwp2h	96	69.551	Oreochromis_niloticus
ENSUMAG00000025481	-	96	74.353	ENSOANG00000006477	-	96	74.466	Ornithorhynchus_anatinus
ENSUMAG00000025481	-	98	68.212	ENSORLG00000000066	pwp2h	97	69.318	Oryzias_latipes
ENSUMAG00000025481	-	98	68.433	ENSORLG00020000321	pwp2h	97	69.545	Oryzias_latipes_hni
ENSUMAG00000025481	-	98	64.238	ENSORLG00015014731	pwp2h	96	65.341	Oryzias_latipes_hsok
ENSUMAG00000025481	-	98	68.254	ENSOMEG00000020671	pwp2h	99	73.096	Oryzias_melastigma
ENSUMAG00000025481	-	99	85.479	ENSOGAG00000012473	-	99	85.699	Otolemur_garnettii
ENSUMAG00000025481	-	99	86.057	ENSOARG00000011672	-	100	88.390	Ovis_aries
ENSUMAG00000025481	-	96	85.698	ENSPPAG00000037874	-	99	84.716	Pan_paniscus
ENSUMAG00000025481	-	99	90.800	ENSPPRG00000011088	-	99	91.128	Panthera_pardus
ENSUMAG00000025481	-	99	82.166	ENSPTIG00000020872	-	99	82.166	Panthera_tigris_altaica
ENSUMAG00000025481	-	99	85.055	ENSPTRG00000013969	-	99	85.055	Pan_troglodytes
ENSUMAG00000025481	-	99	85.385	ENSPANG00000006267	-	99	85.275	Papio_anubis
ENSUMAG00000025481	-	97	67.746	ENSPKIG00000002693	pwp2h	99	69.534	Paramormyrops_kingsleyae
ENSUMAG00000025481	-	96	74.632	ENSPSIG00000009783	-	97	75.033	Pelodiscus_sinensis
ENSUMAG00000025481	-	96	69.388	ENSPMGG00000022349	pwp2h	96	68.969	Periophthalmus_magnuspinnatus
ENSUMAG00000025481	-	98	84.768	ENSPEMG00000009968	Pwp2	98	84.768	Peromyscus_maniculatus_bairdii
ENSUMAG00000025481	-	98	77.544	ENSPCIG00000014548	-	97	78.378	Phascolarctos_cinereus
ENSUMAG00000025481	-	96	69.831	ENSPFOG00000014764	pwp2h	96	69.944	Poecilia_formosa
ENSUMAG00000025481	-	96	69.718	ENSPLAG00000011559	pwp2h	96	69.831	Poecilia_latipinna
ENSUMAG00000025481	-	96	70.056	ENSPMEG00000021347	pwp2h	96	70.169	Poecilia_mexicana
ENSUMAG00000025481	-	96	69.977	ENSPREG00000015887	pwp2h	96	70.169	Poecilia_reticulata
ENSUMAG00000025481	-	99	85.447	ENSPPYG00000011478	-	98	85.336	Pongo_abelii
ENSUMAG00000025481	-	99	81.167	ENSPCAG00000004676	-	99	80.507	Procavia_capensis
ENSUMAG00000025481	-	99	85.526	ENSPCOG00000012856	-	99	85.746	Propithecus_coquereli
ENSUMAG00000025481	-	99	83.498	ENSPVAG00000002312	-	99	83.498	Pteropus_vampyrus
ENSUMAG00000025481	-	75	68.353	ENSPNYG00000008379	pwp2h	95	68.398	Pundamilia_nyererei
ENSUMAG00000025481	-	96	66.629	ENSPNAG00000017876	pwp2h	95	66.853	Pygocentrus_nattereri
ENSUMAG00000025481	-	99	83.115	ENSRNOG00000001210	Pwp2	99	83.007	Rattus_norvegicus
ENSUMAG00000025481	-	99	85.479	ENSRBIG00000034365	-	99	85.479	Rhinopithecus_bieti
ENSUMAG00000025481	-	99	85.589	ENSRROG00000031946	-	99	85.589	Rhinopithecus_roxellana
ENSUMAG00000025481	-	98	41.429	YCR057C	PWP2	92	41.950	Saccharomyces_cerevisiae
ENSUMAG00000025481	-	100	84.239	ENSSBOG00000034554	-	99	84.022	Saimiri_boliviensis_boliviensis
ENSUMAG00000025481	-	50	74.292	ENSSHAG00000011047	-	95	75.980	Sarcophilus_harrisii
ENSUMAG00000025481	-	98	67.721	ENSSFOG00015003316	pwp2	97	68.415	Scleropages_formosus
ENSUMAG00000025481	-	96	70.114	ENSSMAG00000011839	pwp2h	95	69.989	Scophthalmus_maximus
ENSUMAG00000025481	-	96	70.261	ENSSDUG00000011462	pwp2h	96	70.408	Seriola_dumerili
ENSUMAG00000025481	-	96	69.910	ENSSLDG00000008651	pwp2h	95	69.944	Seriola_lalandi_dorsalis
ENSUMAG00000025481	-	97	74.607	ENSSPUG00000002980	-	98	75.255	Sphenodon_punctatus
ENSUMAG00000025481	-	96	69.932	ENSSPAG00000023368	pwp2h	96	69.854	Stegastes_partitus
ENSUMAG00000025481	-	99	85.652	ENSSSCG00000029627	-	99	85.433	Sus_scrofa
ENSUMAG00000025481	-	63	68.366	ENSTGUG00000018216	-	99	69.120	Taeniopygia_guttata
ENSUMAG00000025481	-	96	72.902	ENSTGUG00000005996	-	99	73.151	Taeniopygia_guttata
ENSUMAG00000025481	-	98	67.411	ENSTRUG00000013258	pwp2h	97	68.104	Takifugu_rubripes
ENSUMAG00000025481	-	96	67.650	ENSTNIG00000010613	pwp2h	97	67.269	Tetraodon_nigroviridis
ENSUMAG00000025481	-	81	86.424	ENSTBEG00000015597	-	88	86.616	Tupaia_belangeri
ENSUMAG00000025481	-	93	87.836	ENSTTRG00000006728	-	99	87.719	Tursiops_truncatus
ENSUMAG00000025481	-	99	96.491	ENSUAMG00000019031	-	99	96.491	Ursus_americanus
ENSUMAG00000025481	-	98	90.909	ENSVVUG00000024125	-	99	90.263	Vulpes_vulpes
ENSUMAG00000025481	-	71	62.353	ENSXETG00000018002	pwp2	98	49.657	Xenopus_tropicalis
ENSUMAG00000025481	-	96	65.914	ENSXCOG00000020474	pwp2h	97	65.953	Xiphophorus_couchianus
ENSUMAG00000025481	-	98	68.456	ENSXMAG00000008124	pwp2h	96	69.831	Xiphophorus_maculatus