EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000025507 (Gene tree)
Gene ID: 103680701
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 17255 bases
Position: chrKK499097.1:2472829-2490083
Accession: 18785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000035483	Nop52	PF05997.12	1.5e-58	1	1
ENSUMAP00000035482	Nop52	PF05997.12	1.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000041973	RRP1-201	2449	-	ENSUMAP00000035482	384 (aa)	-	-
ENSUMAT00000041974	RRP1-202	1278	-	ENSUMAP00000035483	425 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000025507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000025507's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000025507	RRP1	73	49.688	ENSUMAG00000025510	RRP1B	57	52.560

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000025507	RRP1	98	62.990	ENSG00000160214	RRP1	90	66.271	Homo_sapiens
ENSUMAG00000025507	RRP1	99	92.031	ENSAMEG00000011448	RRP1	90	91.220	Ailuropoda_melanoleuca
ENSUMAG00000025507	RRP1	70	50.842	ENSACIG00000019121	rrp1	65	48.903	Amphilophus_citrinellus
ENSUMAG00000025507	RRP1	90	42.693	ENSAOCG00000017894	-	81	44.536	Amphiprion_ocellaris
ENSUMAG00000025507	RRP1	81	53.165	ENSACAG00000017851	RRP1B	50	47.901	Anolis_carolinensis
ENSUMAG00000025507	RRP1	69	77.338	ENSANAG00000037815	RRP1	89	64.964	Aotus_nancymaae
ENSUMAG00000025507	RRP1	98	61.658	ENSBTAG00000003981	RRP1	96	63.990	Bos_taurus
ENSUMAG00000025507	RRP1	92	66.310	ENSCJAG00000043205	RRP1	80	68.354	Callithrix_jacchus
ENSUMAG00000025507	RRP1	79	48.428	ENSCAFG00000010621	RRP1B	63	44.796	Canis_familiaris
ENSUMAG00000025507	RRP1	100	81.934	ENSCAFG00000010646	RRP1	91	82.126	Canis_familiaris
ENSUMAG00000025507	RRP1	100	81.934	ENSCAFG00020018979	RRP1	91	82.126	Canis_lupus_dingo
ENSUMAG00000025507	RRP1	98	64.083	ENSCHIG00000020948	RRP1	89	65.764	Capra_hircus
ENSUMAG00000025507	RRP1	98	62.278	ENSTSYG00000012831	RRP1	89	64.269	Carlito_syrichta
ENSUMAG00000025507	RRP1	80	64.535	ENSCAPG00000008576	RRP1	89	66.761	Cavia_aperea
ENSUMAG00000025507	RRP1	99	63.265	ENSCPOG00000038986	RRP1	90	66.176	Cavia_porcellus
ENSUMAG00000025507	RRP1	79	47.352	ENSCCAG00000029384	RRP1B	51	49.118	Cebus_capucinus
ENSUMAG00000025507	RRP1	98	66.915	ENSCCAG00000029828	RRP1	90	66.825	Cebus_capucinus
ENSUMAG00000025507	RRP1	98	64.810	ENSCATG00000015632	RRP1	90	66.271	Cercocebus_atys
ENSUMAG00000025507	RRP1	91	68.785	ENSCLAG00000011639	RRP1	90	66.586	Chinchilla_lanigera
ENSUMAG00000025507	RRP1	66	76.389	ENSCSAG00000007936	RRP1	87	76.389	Chlorocebus_sabaeus
ENSUMAG00000025507	RRP1	90	44.533	ENSCSAG00000007961	RRP1B	51	46.193	Chlorocebus_sabaeus
ENSUMAG00000025507	RRP1	75	31.461	ENSCING00000003304	-	80	30.303	Ciona_intestinalis
ENSUMAG00000025507	RRP1	98	43.564	ENSCANG00000040952	RRP1B	54	45.154	Colobus_angolensis_palliatus
ENSUMAG00000025507	RRP1	98	59.948	ENSCANG00000042611	RRP1	89	59.397	Colobus_angolensis_palliatus
ENSUMAG00000025507	RRP1	99	63.265	ENSCGRG00001011920	Rrp1	89	62.927	Cricetulus_griseus_chok1gshd
ENSUMAG00000025507	RRP1	99	63.265	ENSCGRG00000008915	Rrp1	89	62.927	Cricetulus_griseus_crigri
ENSUMAG00000025507	RRP1	78	47.522	ENSCSEG00000020711	-	76	44.417	Cynoglossus_semilaevis
ENSUMAG00000025507	RRP1	82	41.049	ENSCVAG00000017568	-	81	45.141	Cyprinodon_variegatus
ENSUMAG00000025507	RRP1	98	64.899	ENSDNOG00000019880	RRP1	89	66.106	Dasypus_novemcinctus
ENSUMAG00000025507	RRP1	98	61.637	ENSDORG00000002104	Rrp1	98	63.017	Dipodomys_ordii
ENSUMAG00000025507	RRP1	65	60.432	ENSETEG00000002963	-	63	60.650	Echinops_telfairi
ENSUMAG00000025507	RRP1	98	69.543	ENSEASG00005001673	RRP1	91	71.990	Equus_asinus_asinus
ENSUMAG00000025507	RRP1	98	68.782	ENSECAG00000015703	RRP1	92	72.549	Equus_caballus
ENSUMAG00000025507	RRP1	95	39.599	ENSELUG00000015885	-	89	41.766	Esox_lucius
ENSUMAG00000025507	RRP1	99	78.238	ENSFCAG00000008434	RRP1	90	80.344	Felis_catus
ENSUMAG00000025507	RRP1	99	64.660	ENSFDAG00000013728	RRP1	90	65.764	Fukomys_damarensis
ENSUMAG00000025507	RRP1	83	43.077	ENSGACG00000001438	rrp1	53	43.768	Gasterosteus_aculeatus
ENSUMAG00000025507	RRP1	98	63.480	ENSGGOG00000000173	RRP1	90	66.508	Gorilla_gorilla
ENSUMAG00000025507	RRP1	72	46.918	ENSHBUG00000003766	-	51	41.832	Haplochromis_burtoni
ENSUMAG00000025507	RRP1	99	60.367	ENSHGLG00000017085	RRP1	86	63.275	Heterocephalus_glaber_female
ENSUMAG00000025507	RRP1	71	42.282	ENSIPUG00000000673	-	61	45.253	Ictalurus_punctatus
ENSUMAG00000025507	RRP1	95	65.676	ENSSTOG00000011116	RRP1	88	66.154	Ictidomys_tridecemlineatus
ENSUMAG00000025507	RRP1	99	64.660	ENSJJAG00000018886	Rrp1	89	64.691	Jaculus_jaculus
ENSUMAG00000025507	RRP1	72	44.079	ENSLBEG00000021417	RRP1	85	46.921	Labrus_bergylta
ENSUMAG00000025507	RRP1	86	47.384	ENSLAFG00000000766	RRP1B	83	49.718	Loxodonta_africana
ENSUMAG00000025507	RRP1	100	58.454	ENSLAFG00000022901	RRP1	90	60.557	Loxodonta_africana
ENSUMAG00000025507	RRP1	98	64.677	ENSMFAG00000003202	RRP1	90	65.721	Macaca_fascicularis
ENSUMAG00000025507	RRP1	94	43.823	ENSMFAG00000039152	RRP1B	51	45.802	Macaca_fascicularis
ENSUMAG00000025507	RRP1	98	64.179	ENSMMUG00000012304	RRP1	90	65.248	Macaca_mulatta
ENSUMAG00000025507	RRP1	90	45.366	ENSMMUG00000000104	RRP1B	52	46.447	Macaca_mulatta
ENSUMAG00000025507	RRP1	94	44.419	ENSMNEG00000034269	RRP1B	51	46.447	Macaca_nemestrina
ENSUMAG00000025507	RRP1	98	63.930	ENSMNEG00000031210	RRP1	90	64.775	Macaca_nemestrina
ENSUMAG00000025507	RRP1	98	63.119	ENSMLEG00000037797	RRP1	98	66.271	Mandrillus_leucophaeus
ENSUMAG00000025507	RRP1	90	44.800	ENSMLEG00000040044	RRP1B	54	45.792	Mandrillus_leucophaeus
ENSUMAG00000025507	RRP1	85	53.687	ENSMAUG00000017653	Rrp1	88	50.966	Mesocricetus_auratus
ENSUMAG00000025507	RRP1	89	44.290	ENSMICG00000004686	RRP1B	51	46.277	Microcebus_murinus
ENSUMAG00000025507	RRP1	98	64.122	ENSMICG00000004700	RRP1	89	64.493	Microcebus_murinus
ENSUMAG00000025507	RRP1	99	52.656	ENSMOCG00000015687	Rrp1	90	53.524	Microtus_ochrogaster
ENSUMAG00000025507	RRP1	74	42.945	ENSMMOG00000019175	rrp1	86	42.982	Mola_mola
ENSUMAG00000025507	RRP1	77	45.183	ENSMALG00000010310	rrp1	83	47.812	Monopterus_albus
ENSUMAG00000025507	RRP1	98	77.436	MGP_CAROLIEiJ_G0015508	Rrp1	91	55.342	Mus_caroli
ENSUMAG00000025507	RRP1	98	78.836	ENSMUSG00000061032	Rrp1	90	55.819	Mus_musculus
ENSUMAG00000025507	RRP1	98	78.462	MGP_PahariEiJ_G0030921	Rrp1	91	54.468	Mus_pahari
ENSUMAG00000025507	RRP1	98	78.836	MGP_SPRETEiJ_G0016321	Rrp1	90	55.819	Mus_spretus
ENSUMAG00000025507	RRP1	89	69.554	ENSMPUG00000009826	RRP1	91	69.866	Mustela_putorius_furo
ENSUMAG00000025507	RRP1	89	89.820	ENSMLUG00000017788	RRP1	90	64.348	Myotis_lucifugus
ENSUMAG00000025507	RRP1	93	60.847	ENSNGAG00000022344	Rrp1	90	47.149	Nannospalax_galili
ENSUMAG00000025507	RRP1	80	45.370	ENSNGAG00000021073	Rrp1b	51	44.648	Nannospalax_galili
ENSUMAG00000025507	RRP1	98	62.255	ENSNLEG00000034734	RRP1	90	65.796	Nomascus_leucogenys
ENSUMAG00000025507	RRP1	76	63.265	ENSOPRG00000001319	RRP1	87	66.773	Ochotona_princeps
ENSUMAG00000025507	RRP1	73	58.654	ENSOANG00000006472	-	94	52.857	Ornithorhynchus_anatinus
ENSUMAG00000025507	RRP1	87	52.228	ENSOCUG00000022843	-	78	80.921	Oryctolagus_cuniculus
ENSUMAG00000025507	RRP1	69	51.880	ENSOGAG00000009872	RRP1B	53	45.115	Otolemur_garnettii
ENSUMAG00000025507	RRP1	85	68.235	ENSOGAG00000006105	RRP1	89	65.133	Otolemur_garnettii
ENSUMAG00000025507	RRP1	98	59.432	ENSOARG00000011434	RRP1	88	62.315	Ovis_aries
ENSUMAG00000025507	RRP1	98	62.745	ENSPPAG00000029050	RRP1	90	66.033	Pan_paniscus
ENSUMAG00000025507	RRP1	99	77.720	ENSPPRG00000010656	RRP1	90	79.607	Panthera_pardus
ENSUMAG00000025507	RRP1	78	46.032	ENSPTIG00000016894	RRP1B	56	47.748	Panthera_tigris_altaica
ENSUMAG00000025507	RRP1	92	68.750	ENSPTIG00000019473	RRP1	88	70.663	Panthera_tigris_altaica
ENSUMAG00000025507	RRP1	98	62.745	ENSPTRG00000013962	RRP1	90	66.033	Pan_troglodytes
ENSUMAG00000025507	RRP1	98	62.376	ENSPANG00000015097	RRP1	90	65.558	Papio_anubis
ENSUMAG00000025507	RRP1	90	44.800	ENSPANG00000011090	RRP1B	51	46.447	Papio_anubis
ENSUMAG00000025507	RRP1	77	35.197	ENSPMGG00000007512	-	80	37.386	Periophthalmus_magnuspinnatus
ENSUMAG00000025507	RRP1	100	61.869	ENSPEMG00000018421	Rrp1	90	64.806	Peromyscus_maniculatus_bairdii
ENSUMAG00000025507	RRP1	86	56.845	ENSPCIG00000015523	-	74	59.763	Phascolarctos_cinereus
ENSUMAG00000025507	RRP1	99	40.051	ENSPFOG00000007424	-	50	42.615	Poecilia_formosa
ENSUMAG00000025507	RRP1	82	43.827	ENSPLAG00000016684	-	57	42.336	Poecilia_latipinna
ENSUMAG00000025507	RRP1	98	62.654	ENSPPYG00000011474	RRP1	90	65.952	Pongo_abelii
ENSUMAG00000025507	RRP1	73	57.951	ENSPCAG00000008370	-	79	59.310	Procavia_capensis
ENSUMAG00000025507	RRP1	98	61.578	ENSPCOG00000017706	RRP1	89	61.466	Propithecus_coquereli
ENSUMAG00000025507	RRP1	85	45.910	ENSPCOG00000017927	RRP1B	51	45.910	Propithecus_coquereli
ENSUMAG00000025507	RRP1	76	51.786	ENSPVAG00000009925	-	71	51.339	Pteropus_vampyrus
ENSUMAG00000025507	RRP1	98	61.224	ENSRNOG00000001203	Rrp1	89	63.196	Rattus_norvegicus
ENSUMAG00000025507	RRP1	90	37.333	ENSRBIG00000041689	RRP1B	50	39.340	Rhinopithecus_bieti
ENSUMAG00000025507	RRP1	98	61.408	ENSRBIG00000032082	RRP1	90	63.869	Rhinopithecus_bieti
ENSUMAG00000025507	RRP1	98	61.650	ENSRROG00000039799	RRP1	90	63.765	Rhinopithecus_roxellana
ENSUMAG00000025507	RRP1	90	44.800	ENSRROG00000031499	RRP1B	55	46.447	Rhinopithecus_roxellana
ENSUMAG00000025507	RRP1	84	72.000	ENSSBOG00000034689	RRP1	89	68.262	Saimiri_boliviensis_boliviensis
ENSUMAG00000025507	RRP1	71	60.791	ENSSHAG00000010304	-	91	63.851	Sarcophilus_harrisii
ENSUMAG00000025507	RRP1	71	46.358	ENSSFOG00015003932	-	53	46.821	Scleropages_formosus
ENSUMAG00000025507	RRP1	77	46.326	ENSSMAG00000016847	-	78	47.484	Scophthalmus_maximus
ENSUMAG00000025507	RRP1	98	67.013	ENSSSCG00000037061	RRP1	89	68.395	Sus_scrofa
ENSUMAG00000025507	RRP1	76	50.149	ENSSSCG00000021698	RRP1B	51	50.149	Sus_scrofa
ENSUMAG00000025507	RRP1	72	46.735	ENSTRUG00000017592	rrp1	86	48.701	Takifugu_rubripes
ENSUMAG00000025507	RRP1	94	43.735	ENSTBEG00000000422	RRP1B	51	51.877	Tupaia_belangeri
ENSUMAG00000025507	RRP1	66	90.361	ENSTBEG00000001260	-	55	91.781	Tupaia_belangeri
ENSUMAG00000025507	RRP1	65	72.500	ENSTTRG00000011162	RRP1	74	72.500	Tursiops_truncatus
ENSUMAG00000025507	RRP1	94	41.711	ENSTTRG00000000723	RRP1B	51	41.979	Tursiops_truncatus
ENSUMAG00000025507	RRP1	85	98.160	ENSUAMG00000014189	-	99	98.160	Ursus_americanus
ENSUMAG00000025507	RRP1	80	77.707	ENSVVUG00000024498	-	79	78.344	Vulpes_vulpes
ENSUMAG00000025507	RRP1	94	41.093	ENSXMAG00000023123	-	51	41.805	Xiphophorus_maculatus