EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000000228 (Gene tree)
Gene ID: -
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 7889 bases
Position: chrGeneScaffold_264:267213-275101
Accession: 25542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000000209	AARP2CN	PF08142.12	6.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000000228	TSR1-201	1932	-	ENSVPAP00000000209	644 (aa)	-	UPI00018BD927

Gene Model

Click here to download ENSVPAG00000000228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000000228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000000228	TSR1	100	85.481	ENSG00000167721	TSR1	99	86.280	Homo_sapiens
ENSVPAG00000000228	TSR1	99	49.360	ENSAPOG00000020891	tsr1	83	49.857	Acanthochromis_polyacanthus
ENSVPAG00000000228	TSR1	100	86.823	ENSAMEG00000007599	TSR1	83	86.823	Ailuropoda_melanoleuca
ENSVPAG00000000228	TSR1	99	49.710	ENSACIG00000007090	tsr1	83	51.176	Amphilophus_citrinellus
ENSVPAG00000000228	TSR1	99	49.153	ENSAOCG00000023284	tsr1	83	50.144	Amphiprion_ocellaris
ENSVPAG00000000228	TSR1	92	49.394	ENSAPEG00000008452	tsr1	83	50.463	Amphiprion_percula
ENSVPAG00000000228	TSR1	90	62.787	ENSAPLG00000013422	TSR1	82	62.787	Anas_platyrhynchos
ENSVPAG00000000228	TSR1	84	54.138	ENSACAG00000000859	TSR1	92	54.310	Anolis_carolinensis
ENSVPAG00000000228	TSR1	100	86.627	ENSANAG00000031071	TSR1	84	86.478	Aotus_nancymaae
ENSVPAG00000000228	TSR1	99	50.285	ENSACLG00000007595	tsr1	83	50.644	Astatotilapia_calliptera
ENSVPAG00000000228	TSR1	63	50.483	ENSAMXG00000008470	tsr1	92	49.774	Astyanax_mexicanus
ENSVPAG00000000228	TSR1	100	91.085	ENSBTAG00000004225	TSR1	84	91.085	Bos_taurus
ENSVPAG00000000228	TSR1	99	32.803	WBGene00006497	tag-151	82	34.407	Caenorhabditis_elegans
ENSVPAG00000000228	TSR1	100	87.073	ENSCJAG00000012456	TSR1	84	86.924	Callithrix_jacchus
ENSVPAG00000000228	TSR1	100	86.944	ENSCAFG00000002106	-	84	86.944	Canis_familiaris
ENSVPAG00000000228	TSR1	99	86.647	ENSCAFG00000019273	-	93	86.647	Canis_familiaris
ENSVPAG00000000228	TSR1	100	86.202	ENSCAFG00020009728	TSR1	98	84.031	Canis_lupus_dingo
ENSVPAG00000000228	TSR1	100	91.085	ENSCHIG00000023935	TSR1	84	91.085	Capra_hircus
ENSVPAG00000000228	TSR1	100	86.776	ENSTSYG00000005468	TSR1	84	86.776	Carlito_syrichta
ENSVPAG00000000228	TSR1	100	84.844	ENSCPOG00000014833	TSR1	89	84.844	Cavia_porcellus
ENSVPAG00000000228	TSR1	100	87.370	ENSCCAG00000028962	TSR1	88	87.221	Cebus_capucinus
ENSVPAG00000000228	TSR1	100	86.370	ENSCATG00000044262	TSR1	84	86.222	Cercocebus_atys
ENSVPAG00000000228	TSR1	100	85.587	ENSCLAG00000005567	TSR1	84	85.587	Chinchilla_lanigera
ENSVPAG00000000228	TSR1	100	86.370	ENSCSAG00000013788	TSR1	84	86.222	Chlorocebus_sabaeus
ENSVPAG00000000228	TSR1	99	63.677	ENSCPBG00000020363	TSR1	81	64.941	Chrysemys_picta_bellii
ENSVPAG00000000228	TSR1	99	41.116	ENSCING00000020658	-	85	40.588	Ciona_intestinalis
ENSVPAG00000000228	TSR1	99	39.706	ENSCSAVG00000001875	-	85	40.351	Ciona_savignyi
ENSVPAG00000000228	TSR1	100	85.604	ENSCANG00000033056	TSR1	82	85.604	Colobus_angolensis_palliatus
ENSVPAG00000000228	TSR1	100	81.157	ENSCGRG00001023942	Tsr1	84	82.344	Cricetulus_griseus_chok1gshd
ENSVPAG00000000228	TSR1	100	78.261	ENSCGRG00000013015	Tsr1	83	76.226	Cricetulus_griseus_crigri
ENSVPAG00000000228	TSR1	99	48.633	ENSCSEG00000013009	tsr1	83	49.928	Cynoglossus_semilaevis
ENSVPAG00000000228	TSR1	99	49.140	ENSCVAG00000000506	tsr1	83	50.434	Cyprinodon_variegatus
ENSVPAG00000000228	TSR1	99	47.254	ENSDARG00000007744	tsr1	90	48.843	Danio_rerio
ENSVPAG00000000228	TSR1	100	86.033	ENSDNOG00000004715	TSR1	84	86.627	Dasypus_novemcinctus
ENSVPAG00000000228	TSR1	100	77.898	ENSDORG00000023234	-	85	77.898	Dipodomys_ordii
ENSVPAG00000000228	TSR1	100	83.210	ENSDORG00000016371	-	84	83.210	Dipodomys_ordii
ENSVPAG00000000228	TSR1	99	39.255	FBgn0037073	Tsr1	83	38.857	Drosophila_melanogaster
ENSVPAG00000000228	TSR1	94	88.506	ENSETEG00000017534	TSR1	76	88.506	Echinops_telfairi
ENSVPAG00000000228	TSR1	95	46.594	ENSEBUG00000013731	TSR1	82	46.296	Eptatretus_burgeri
ENSVPAG00000000228	TSR1	100	89.747	ENSEASG00005009302	TSR1	81	89.747	Equus_asinus_asinus
ENSVPAG00000000228	TSR1	100	89.450	ENSECAG00000009114	TSR1	84	89.450	Equus_caballus
ENSVPAG00000000228	TSR1	99	48.939	ENSELUG00000020984	tsr1	80	49.856	Esox_lucius
ENSVPAG00000000228	TSR1	100	87.964	ENSFCAG00000006313	TSR1	84	87.964	Felis_catus
ENSVPAG00000000228	TSR1	99	62.979	ENSFALG00000006532	TSR1	83	63.422	Ficedula_albicollis
ENSVPAG00000000228	TSR1	100	84.695	ENSFDAG00000006038	TSR1	84	84.695	Fukomys_damarensis
ENSVPAG00000000228	TSR1	99	46.915	ENSGMOG00000010336	tsr1	83	48.988	Gadus_morhua
ENSVPAG00000000228	TSR1	99	48.575	ENSGAFG00000012993	tsr1	83	50.287	Gambusia_affinis
ENSVPAG00000000228	TSR1	99	49.491	ENSGACG00000010843	tsr1	83	50.218	Gasterosteus_aculeatus
ENSVPAG00000000228	TSR1	56	48.343	ENSGAGG00000000440	-	98	48.343	Gopherus_agassizii
ENSVPAG00000000228	TSR1	99	64.565	ENSGAGG00000025619	-	83	65.134	Gopherus_agassizii
ENSVPAG00000000228	TSR1	100	85.333	ENSGGOG00000001704	TSR1	84	85.778	Gorilla_gorilla
ENSVPAG00000000228	TSR1	99	50.213	ENSHBUG00000017904	tsr1	83	51.070	Haplochromis_burtoni
ENSVPAG00000000228	TSR1	96	79.618	ENSHGLG00000015688	-	82	78.981	Heterocephalus_glaber_female
ENSVPAG00000000228	TSR1	100	86.181	ENSHGLG00000012806	-	84	86.181	Heterocephalus_glaber_female
ENSVPAG00000000228	TSR1	100	86.181	ENSHGLG00100015392	TSR1	84	86.181	Heterocephalus_glaber_male
ENSVPAG00000000228	TSR1	99	50.966	ENSHCOG00000001432	tsr1	82	51.662	Hippocampus_comes
ENSVPAG00000000228	TSR1	99	47.443	ENSIPUG00000004618	tsr1	83	50.286	Ictalurus_punctatus
ENSVPAG00000000228	TSR1	100	84.593	ENSSTOG00000011819	TSR1	84	85.481	Ictidomys_tridecemlineatus
ENSVPAG00000000228	TSR1	90	74.959	ENSJJAG00000019505	Tsr1	78	74.422	Jaculus_jaculus
ENSVPAG00000000228	TSR1	99	49.857	ENSKMAG00000005763	tsr1	83	50.216	Kryptolebias_marmoratus
ENSVPAG00000000228	TSR1	99	49.360	ENSLBEG00000021823	tsr1	83	50.143	Labrus_bergylta
ENSVPAG00000000228	TSR1	99	56.997	ENSLACG00000002197	TSR1	83	58.126	Latimeria_chalumnae
ENSVPAG00000000228	TSR1	75	51.963	ENSLOCG00000006491	TSR1	80	46.875	Lepisosteus_oculatus
ENSVPAG00000000228	TSR1	100	86.370	ENSMFAG00000021330	TSR1	84	86.222	Macaca_fascicularis
ENSVPAG00000000228	TSR1	100	85.926	ENSMMUG00000017519	TSR1	84	85.778	Macaca_mulatta
ENSVPAG00000000228	TSR1	100	85.926	ENSMNEG00000031382	TSR1	84	85.778	Macaca_nemestrina
ENSVPAG00000000228	TSR1	100	86.222	ENSMLEG00000036733	TSR1	84	86.074	Mandrillus_leucophaeus
ENSVPAG00000000228	TSR1	99	50.714	ENSMZEG00005007477	tsr1	83	51.076	Maylandia_zebra
ENSVPAG00000000228	TSR1	99	61.595	ENSMGAG00000005576	TSR1	83	62.832	Meleagris_gallopavo
ENSVPAG00000000228	TSR1	100	88.559	ENSMICG00000012943	TSR1	84	88.559	Microcebus_murinus
ENSVPAG00000000228	TSR1	100	82.047	ENSMOCG00000022764	Tsr1	84	82.938	Microtus_ochrogaster
ENSVPAG00000000228	TSR1	99	50.072	ENSMMOG00000014280	tsr1	83	50.363	Mola_mola
ENSVPAG00000000228	TSR1	100	73.591	ENSMODG00000010658	TSR1	84	73.591	Monodelphis_domestica
ENSVPAG00000000228	TSR1	100	81.724	MGP_CAROLIEiJ_G0016727	Tsr1	84	82.467	Mus_caroli
ENSVPAG00000000228	TSR1	100	82.764	ENSMUSG00000038335	Tsr1	84	82.764	Mus_musculus
ENSVPAG00000000228	TSR1	100	82.169	MGP_PahariEiJ_G0017864	Tsr1	84	83.061	Mus_pahari
ENSVPAG00000000228	TSR1	100	82.912	MGP_SPRETEiJ_G0017570	Tsr1	84	82.912	Mus_spretus
ENSVPAG00000000228	TSR1	77	85.524	ENSMPUG00000013000	TSR1	80	85.524	Mustela_putorius_furo
ENSVPAG00000000228	TSR1	100	90.788	ENSMLUG00000003505	TSR1	84	90.788	Myotis_lucifugus
ENSVPAG00000000228	TSR1	61	78.718	ENSNGAG00000020455	-	99	79.328	Nannospalax_galili
ENSVPAG00000000228	TSR1	99	50.142	ENSNBRG00000020728	tsr1	83	50.640	Neolamprologus_brichardi
ENSVPAG00000000228	TSR1	100	80.124	ENSNLEG00000017184	TSR1	83	78.158	Nomascus_leucogenys
ENSVPAG00000000228	TSR1	100	70.222	ENSMEUG00000015828	TSR1	84	70.458	Notamacropus_eugenii
ENSVPAG00000000228	TSR1	99	50.213	ENSONIG00000013131	tsr1	83	50.935	Oreochromis_niloticus
ENSVPAG00000000228	TSR1	95	65.736	ENSOANG00000008637	TSR1	82	66.202	Ornithorhynchus_anatinus
ENSVPAG00000000228	TSR1	100	86.330	ENSOCUG00000014256	TSR1	84	86.330	Oryctolagus_cuniculus
ENSVPAG00000000228	TSR1	99	48.359	ENSORLG00000004926	tsr1	83	49.211	Oryzias_latipes
ENSVPAG00000000228	TSR1	99	48.429	ENSORLG00020008792	tsr1	83	49.282	Oryzias_latipes_hni
ENSVPAG00000000228	TSR1	99	48.217	ENSORLG00015013838	tsr1	83	49.067	Oryzias_latipes_hsok
ENSVPAG00000000228	TSR1	99	48.649	ENSOMEG00000004830	tsr1	83	49.211	Oryzias_melastigma
ENSVPAG00000000228	TSR1	100	85.125	ENSOGAG00000004492	TSR1	84	84.978	Otolemur_garnettii
ENSVPAG00000000228	TSR1	100	90.936	ENSOARG00000015437	TSR1	82	90.936	Ovis_aries
ENSVPAG00000000228	TSR1	100	85.630	ENSPPAG00000036355	TSR1	84	85.778	Pan_paniscus
ENSVPAG00000000228	TSR1	100	87.964	ENSPPRG00000015519	-	84	87.964	Panthera_pardus
ENSVPAG00000000228	TSR1	100	88.113	ENSPTIG00000010608	TSR1	84	88.113	Panthera_tigris_altaica
ENSVPAG00000000228	TSR1	100	85.630	ENSPTRG00000008547	TSR1	84	85.778	Pan_troglodytes
ENSVPAG00000000228	TSR1	100	82.222	ENSPANG00000024463	TSR1	83	82.074	Papio_anubis
ENSVPAG00000000228	TSR1	99	49.548	ENSPKIG00000013972	tsr1	83	48.692	Paramormyrops_kingsleyae
ENSVPAG00000000228	TSR1	85	62.326	ENSPSIG00000018258	TSR1	81	63.085	Pelodiscus_sinensis
ENSVPAG00000000228	TSR1	99	51.092	ENSPMGG00000011577	tsr1	83	51.982	Periophthalmus_magnuspinnatus
ENSVPAG00000000228	TSR1	100	81.575	ENSPEMG00000018033	Tsr1	84	81.129	Peromyscus_maniculatus_bairdii
ENSVPAG00000000228	TSR1	100	73.481	ENSPCIG00000009357	TSR1	82	74.779	Phascolarctos_cinereus
ENSVPAG00000000228	TSR1	99	49.003	ENSPFOG00000004483	TSR1	83	51.664	Poecilia_formosa
ENSVPAG00000000228	TSR1	99	51.511	ENSPLAG00000022320	tsr1	82	52.266	Poecilia_latipinna
ENSVPAG00000000228	TSR1	63	50.000	ENSPREG00000010354	tsr1	94	49.887	Poecilia_reticulata
ENSVPAG00000000228	TSR1	100	76.878	ENSPPYG00000007792	TSR1	83	76.730	Pongo_abelii
ENSVPAG00000000228	TSR1	66	91.579	ENSPCAG00000012973	-	72	91.579	Procavia_capensis
ENSVPAG00000000228	TSR1	100	87.964	ENSPCOG00000017928	TSR1	99	89.106	Propithecus_coquereli
ENSVPAG00000000228	TSR1	100	88.262	ENSPVAG00000002162	TSR1	84	88.113	Pteropus_vampyrus
ENSVPAG00000000228	TSR1	99	50.427	ENSPNYG00000016163	tsr1	83	50.787	Pundamilia_nyererei
ENSVPAG00000000228	TSR1	99	47.943	ENSPNAG00000008659	tsr1	83	49.220	Pygocentrus_nattereri
ENSVPAG00000000228	TSR1	100	81.157	ENSRNOG00000002980	Tsr1	84	81.454	Rattus_norvegicus
ENSVPAG00000000228	TSR1	100	86.370	ENSRBIG00000040016	TSR1	84	86.222	Rhinopithecus_bieti
ENSVPAG00000000228	TSR1	100	86.222	ENSRROG00000030361	TSR1	84	86.074	Rhinopithecus_roxellana
ENSVPAG00000000228	TSR1	100	86.330	ENSSBOG00000020785	TSR1	84	86.924	Saimiri_boliviensis_boliviensis
ENSVPAG00000000228	TSR1	100	73.117	ENSSHAG00000011394	TSR1	84	72.929	Sarcophilus_harrisii
ENSVPAG00000000228	TSR1	99	50.875	ENSSFOG00015005455	tsr1	83	52.041	Scleropages_formosus
ENSVPAG00000000228	TSR1	99	47.949	ENSSMAG00000009504	tsr1	83	50.642	Scophthalmus_maximus
ENSVPAG00000000228	TSR1	99	47.881	ENSSDUG00000012074	tsr1	83	50.000	Seriola_dumerili
ENSVPAG00000000228	TSR1	99	48.153	ENSSLDG00000002031	tsr1	83	49.284	Seriola_lalandi_dorsalis
ENSVPAG00000000228	TSR1	96	84.431	ENSSARG00000000759	TSR1	77	84.431	Sorex_araneus
ENSVPAG00000000228	TSR1	99	62.702	ENSSPUG00000007042	TSR1	83	63.289	Sphenodon_punctatus
ENSVPAG00000000228	TSR1	100	90.045	ENSSSCG00000038534	TSR1	84	91.085	Sus_scrofa
ENSVPAG00000000228	TSR1	90	63.132	ENSTGUG00000005883	TSR1	83	64.098	Taeniopygia_guttata
ENSVPAG00000000228	TSR1	99	49.787	ENSTRUG00000004665	tsr1	94	50.779	Takifugu_rubripes
ENSVPAG00000000228	TSR1	99	50.801	ENSTNIG00000016196	tsr1	84	51.234	Tetraodon_nigroviridis
ENSVPAG00000000228	TSR1	100	90.342	ENSTTRG00000001177	TSR1	84	90.342	Tursiops_truncatus
ENSVPAG00000000228	TSR1	100	88.559	ENSUAMG00000025160	TSR1	99	88.559	Ursus_americanus
ENSVPAG00000000228	TSR1	97	86.636	ENSUMAG00000009294	TSR1	83	86.636	Ursus_maritimus
ENSVPAG00000000228	TSR1	100	86.499	ENSVVUG00000021767	TSR1	84	86.499	Vulpes_vulpes
ENSVPAG00000000228	TSR1	99	58.382	ENSXETG00000023797	tsr1	83	59.297	Xenopus_tropicalis
ENSVPAG00000000228	TSR1	99	50.803	ENSXCOG00000009635	tsr1	83	51.533	Xiphophorus_couchianus
ENSVPAG00000000228	TSR1	99	49.499	ENSXMAG00000001397	tsr1	80	50.431	Xiphophorus_maculatus