EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSVPAG00000000749 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Vicugna_pacos
Status
putative
Strand
Minus strand
Length
23401 bases
Position
chrGeneScaffold_3377:361884-385284
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVPAP00000000688CSDPF00313.221.1e-6614
ENSVPAP00000000688CSDPF00313.221.1e-6624
ENSVPAP00000000688CSDPF00313.221.1e-6634
ENSVPAP00000000688CSDPF00313.221.1e-6644
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVPAT00000000748CSDE1-2012442-ENSVPAP00000000688813 (aa)-UPI00018BE25E
Gene Model
Click here to download ENSVPAG00000000749's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000000749's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVPAG00000000749CSDE18598.592ENSG00000009307CSDE1100100.000Homo_sapiens
ENSVPAG00000000749CSDE17980.233ENSAPOG00000015538csde110080.233Acanthochromis_polyacanthus
ENSVPAG00000000749CSDE18598.122ENSAMEG00000017129CSDE110098.122Ailuropoda_melanoleuca
ENSVPAG00000000749CSDE15080.077ENSACIG00000015175csde19980.077Amphilophus_citrinellus
ENSVPAG00000000749CSDE17980.465ENSAOCG00000011510csde110080.465Amphiprion_ocellaris
ENSVPAG00000000749CSDE18475.587ENSAPEG00000007194csde110080.465Amphiprion_percula
ENSVPAG00000000749CSDE17980.233ENSATEG00000003864csde110080.233Anabas_testudineus
ENSVPAG00000000749CSDE17994.393ENSAPLG00000008797CSDE110094.393Anas_platyrhynchos
ENSVPAG00000000749CSDE17991.080ENSACAG00000003120CSDE110091.080Anolis_carolinensis
ENSVPAG00000000749CSDE18598.122ENSANAG00000024665CSDE110098.122Aotus_nancymaae
ENSVPAG00000000749CSDE17980.420ENSACLG00000013296csde110080.420Astatotilapia_calliptera
ENSVPAG00000000749CSDE17980.787ENSAMXG00000007436csde110080.787Astyanax_mexicanus
ENSVPAG00000000749CSDE18597.653ENSBTAG00000000678CSDE110098.131Bos_taurus
ENSVPAG00000000749CSDE18598.122ENSCJAG00000012565CSDE110098.122Callithrix_jacchus
ENSVPAG00000000749CSDE18398.485ENSCAFG00000009618CSDE110098.485Canis_familiaris
ENSVPAG00000000749CSDE17998.592ENSCAFG00020000481CSDE110098.592Canis_lupus_dingo
ENSVPAG00000000749CSDE18598.101ENSCHIG00000017250CSDE110098.131Capra_hircus
ENSVPAG00000000749CSDE18597.653ENSTSYG00000003747CSDE110098.182Carlito_syrichta
ENSVPAG00000000749CSDE17979.343ENSCAPG00000015128CSDE19879.343Cavia_aperea
ENSVPAG00000000749CSDE17998.592ENSCPOG00000040388CSDE110098.592Cavia_porcellus
ENSVPAG00000000749CSDE18598.122ENSCCAG00000036794CSDE110099.091Cebus_capucinus
ENSVPAG00000000749CSDE17479.268ENSCCAG00000033677-9977.778Cebus_capucinus
ENSVPAG00000000749CSDE17677.273ENSCCAG00000030878-9177.273Cebus_capucinus
ENSVPAG00000000749CSDE18598.592ENSCATG00000036962CSDE110098.592Cercocebus_atys
ENSVPAG00000000749CSDE17998.592ENSCLAG00000006618CSDE110098.592Chinchilla_lanigera
ENSVPAG00000000749CSDE18598.592ENSCSAG00000001658CSDE110098.592Chlorocebus_sabaeus
ENSVPAG00000000749CSDE18590.295ENSCHOG00000000918CSDE19190.295Choloepus_hoffmanni
ENSVPAG00000000749CSDE18591.549ENSCPBG00000016547CSDE110093.925Chrysemys_picta_bellii
ENSVPAG00000000749CSDE17345.581ENSCING00000014465-9545.581Ciona_intestinalis
ENSVPAG00000000749CSDE17747.631ENSCSAVG00000008100-9944.388Ciona_savignyi
ENSVPAG00000000749CSDE18598.592ENSCANG00000035096CSDE110098.592Colobus_angolensis_palliatus
ENSVPAG00000000749CSDE17494.833ENSCANG00000031069-9994.833Colobus_angolensis_palliatus
ENSVPAG00000000749CSDE17997.664ENSCGRG00001016833-10097.664Cricetulus_griseus_chok1gshd
ENSVPAG00000000749CSDE17983.568ENSCGRG00001014011-10083.568Cricetulus_griseus_chok1gshd
ENSVPAG00000000749CSDE17699.091ENSCGRG00000002225-10099.091Cricetulus_griseus_crigri
ENSVPAG00000000749CSDE17984.348ENSCGRG00000005831-10084.348Cricetulus_griseus_crigri
ENSVPAG00000000749CSDE17979.720ENSCSEG00000002620csde110079.720Cynoglossus_semilaevis
ENSVPAG00000000749CSDE17980.465ENSCVAG00000001344csde110080.420Cyprinodon_variegatus
ENSVPAG00000000749CSDE18176.995ENSDARG00000074758csde110076.995Danio_rerio
ENSVPAG00000000749CSDE17997.653ENSDNOG00000010287-9497.653Dasypus_novemcinctus
ENSVPAG00000000749CSDE16375.658ENSDNOG00000034464-10075.658Dasypus_novemcinctus
ENSVPAG00000000749CSDE17997.183ENSDORG00000011609Csde110097.264Dipodomys_ordii
ENSVPAG00000000749CSDE17548.081FBgn0263352Unr7447.875Drosophila_melanogaster
ENSVPAG00000000749CSDE17978.689ENSETEG00000013678-9978.689Echinops_telfairi
ENSVPAG00000000749CSDE17797.521ENSETEG00000002491-7897.521Echinops_telfairi
ENSVPAG00000000749CSDE16289.953ENSETEG00000006280-9989.953Echinops_telfairi
ENSVPAG00000000749CSDE15969.811ENSETEG00000007109-8069.811Echinops_telfairi
ENSVPAG00000000749CSDE17856.039ENSEBUG00000008647csde19856.039Eptatretus_burgeri
ENSVPAG00000000749CSDE18598.592ENSEASG00005006284CSDE110098.592Equus_asinus_asinus
ENSVPAG00000000749CSDE18598.592ENSECAG00000020885CSDE110098.592Equus_caballus
ENSVPAG00000000749CSDE17598.039ENSEEUG00000006286CSDE17498.039Erinaceus_europaeus
ENSVPAG00000000749CSDE18374.648ENSELUG00000015507csde110078.571Esox_lucius
ENSVPAG00000000749CSDE18598.592ENSFCAG00000029266CSDE110098.592Felis_catus
ENSVPAG00000000749CSDE17992.019ENSFALG00000003407CSDE110092.019Ficedula_albicollis
ENSVPAG00000000749CSDE17997.653ENSFDAG00000007882CSDE110097.872Fukomys_damarensis
ENSVPAG00000000749CSDE17780.698ENSFHEG00000010799csde19980.698Fundulus_heteroclitus
ENSVPAG00000000749CSDE17974.528ENSGMOG00000012731csde110074.528Gadus_morhua
ENSVPAG00000000749CSDE17791.878ENSGALG00000002139CSDE19891.878Gallus_gallus
ENSVPAG00000000749CSDE16580.930ENSGAFG00000005241csde19580.930Gambusia_affinis
ENSVPAG00000000749CSDE17976.415ENSGACG00000004544csde110076.415Gasterosteus_aculeatus
ENSVPAG00000000749CSDE18592.019ENSGAGG00000017685CSDE110092.019Gopherus_agassizii
ENSVPAG00000000749CSDE18598.592ENSGGOG00000002164CSDE110098.592Gorilla_gorilla
ENSVPAG00000000749CSDE17980.420ENSHBUG00000020315csde110080.420Haplochromis_burtoni
ENSVPAG00000000749CSDE17595.455ENSHGLG00000010039-10095.455Heterocephalus_glaber_female
ENSVPAG00000000749CSDE17886.626ENSHGLG00000008555-10086.626Heterocephalus_glaber_female
ENSVPAG00000000749CSDE17985.849ENSHGLG00000000650-9585.849Heterocephalus_glaber_female
ENSVPAG00000000749CSDE17990.654ENSHGLG00000003829-10090.654Heterocephalus_glaber_female
ENSVPAG00000000749CSDE17888.406ENSHGLG00000007471-9888.406Heterocephalus_glaber_female
ENSVPAG00000000749CSDE17997.897ENSHGLG00000009620-9797.897Heterocephalus_glaber_female
ENSVPAG00000000749CSDE17987.793ENSHGLG00000019549-10087.793Heterocephalus_glaber_female
ENSVPAG00000000749CSDE17392.025ENSHGLG00100004195-10092.025Heterocephalus_glaber_male
ENSVPAG00000000749CSDE17984.579ENSHGLG00100012072-10084.579Heterocephalus_glaber_male
ENSVPAG00000000749CSDE17593.636ENSHGLG00100006910-10093.636Heterocephalus_glaber_male
ENSVPAG00000000749CSDE17985.377ENSHGLG00100002245-9685.377Heterocephalus_glaber_male
ENSVPAG00000000749CSDE17987.793ENSHGLG00100001846-10087.793Heterocephalus_glaber_male
ENSVPAG00000000749CSDE17998.122ENSHGLG00100019438-10098.122Heterocephalus_glaber_male
ENSVPAG00000000749CSDE17687.500ENSHGLG00100007287-9887.500Heterocephalus_glaber_male
ENSVPAG00000000749CSDE17689.091ENSHGLG00100004833-10089.091Heterocephalus_glaber_male
ENSVPAG00000000749CSDE17978.788ENSHCOG00000004158csde110078.788Hippocampus_comes
ENSVPAG00000000749CSDE17981.250ENSIPUG00000000355csde110081.250Ictalurus_punctatus
ENSVPAG00000000749CSDE17985.446ENSSTOG00000030994-10085.446Ictidomys_tridecemlineatus
ENSVPAG00000000749CSDE16892.929ENSSTOG00000032722-9692.929Ictidomys_tridecemlineatus
ENSVPAG00000000749CSDE17997.653ENSJJAG00000019571Csde110097.653Jaculus_jaculus
ENSVPAG00000000749CSDE18374.648ENSKMAG00000005685csde110074.648Kryptolebias_marmoratus
ENSVPAG00000000749CSDE17980.000ENSLBEG00000014770csde110080.000Labrus_bergylta
ENSVPAG00000000749CSDE18179.002ENSLACG00000018452CSDE19679.368Latimeria_chalumnae
ENSVPAG00000000749CSDE18579.343ENSLOCG00000010413csde19679.343Lepisosteus_oculatus
ENSVPAG00000000749CSDE17998.592ENSLAFG00000007150CSDE19698.592Loxodonta_africana
ENSVPAG00000000749CSDE18598.592ENSMFAG00000003674CSDE110098.592Macaca_fascicularis
ENSVPAG00000000749CSDE18598.592ENSMMUG00000001974CSDE110098.592Macaca_mulatta
ENSVPAG00000000749CSDE18598.592ENSMNEG00000045247CSDE110098.592Macaca_nemestrina
ENSVPAG00000000749CSDE18598.101ENSMLEG00000038673CSDE110098.101Mandrillus_leucophaeus
ENSVPAG00000000749CSDE18377.465ENSMAMG00000008821csde110080.698Mastacembelus_armatus
ENSVPAG00000000749CSDE17980.420ENSMZEG00005021675csde110080.420Maylandia_zebra
ENSVPAG00000000749CSDE17994.159ENSMGAG00000016381CSDE110094.159Meleagris_gallopavo
ENSVPAG00000000749CSDE17996.714ENSMAUG00000014031Csde110097.568Mesocricetus_auratus
ENSVPAG00000000749CSDE18598.592ENSMICG00000002050CSDE110098.592Microcebus_murinus
ENSVPAG00000000749CSDE17997.664ENSMOCG00000018960Csde110097.664Microtus_ochrogaster
ENSVPAG00000000749CSDE17980.698ENSMMOG00000015075csde110080.698Mola_mola
ENSVPAG00000000749CSDE17997.183ENSMODG00000004685CSDE110097.183Monodelphis_domestica
ENSVPAG00000000749CSDE17980.233ENSMALG00000007132csde110080.233Monopterus_albus
ENSVPAG00000000749CSDE17997.664MGP_CAROLIEiJ_G0025444Csde110097.664Mus_caroli
ENSVPAG00000000749CSDE17997.664ENSMUSG00000068823Csde110097.664Mus_musculus
ENSVPAG00000000749CSDE17997.664MGP_PahariEiJ_G0026888Csde110097.664Mus_pahari
ENSVPAG00000000749CSDE17997.664MGP_SPRETEiJ_G0026394Csde110097.664Mus_spretus
ENSVPAG00000000749CSDE17798.485ENSMPUG00000005753CSDE19998.485Mustela_putorius_furo
ENSVPAG00000000749CSDE18597.653ENSMLUG00000005681CSDE110097.653Myotis_lucifugus
ENSVPAG00000000749CSDE17997.183ENSNGAG00000021929Csde110097.264Nannospalax_galili
ENSVPAG00000000749CSDE17569.953ENSNGAG00000012599-10069.953Nannospalax_galili
ENSVPAG00000000749CSDE17980.420ENSNBRG00000020808csde110080.420Neolamprologus_brichardi
ENSVPAG00000000749CSDE18598.592ENSNLEG00000004842CSDE110098.592Nomascus_leucogenys
ENSVPAG00000000749CSDE17797.475ENSMEUG00000002677CSDE110097.475Notamacropus_eugenii
ENSVPAG00000000749CSDE18397.980ENSOPRG00000005002CSDE18897.980Ochotona_princeps
ENSVPAG00000000749CSDE17998.592ENSODEG00000007383-10098.592Octodon_degus
ENSVPAG00000000749CSDE17284.071ENSODEG00000005979-9884.071Octodon_degus
ENSVPAG00000000749CSDE17975.117ENSONIG00000009309csde110075.117Oreochromis_niloticus
ENSVPAG00000000749CSDE16089.062ENSOANG00000003346-8189.062Ornithorhynchus_anatinus
ENSVPAG00000000749CSDE18598.122ENSOCUG00000016438CSDE110098.122Oryctolagus_cuniculus
ENSVPAG00000000749CSDE17980.420ENSORLG00000000707csde110080.420Oryzias_latipes
ENSVPAG00000000749CSDE18374.648ENSORLG00020005148csde110074.648Oryzias_latipes_hni
ENSVPAG00000000749CSDE17980.420ENSORLG00015019415csde110080.420Oryzias_latipes_hsok
ENSVPAG00000000749CSDE17980.698ENSOMEG00000015656csde110080.698Oryzias_melastigma
ENSVPAG00000000749CSDE18598.592ENSOGAG00000012127CSDE110098.592Otolemur_garnettii
ENSVPAG00000000749CSDE18598.312ENSOARG00000020034CSDE110098.312Ovis_aries
ENSVPAG00000000749CSDE18598.592ENSPPAG00000025861CSDE110098.592Pan_paniscus
ENSVPAG00000000749CSDE18598.592ENSPPRG00000006747CSDE110098.592Panthera_pardus
ENSVPAG00000000749CSDE18598.592ENSPTIG00000015468CSDE110098.592Panthera_tigris_altaica
ENSVPAG00000000749CSDE18598.592ENSPTRG00000033721CSDE110098.592Pan_troglodytes
ENSVPAG00000000749CSDE18598.592ENSPANG00000018873CSDE110098.592Papio_anubis
ENSVPAG00000000749CSDE17978.605ENSPKIG00000009459csde110078.605Paramormyrops_kingsleyae
ENSVPAG00000000749CSDE15287.611ENSPSIG00000003823CSDE19687.611Pelodiscus_sinensis
ENSVPAG00000000749CSDE17979.535ENSPMGG00000000772csde110079.535Periophthalmus_magnuspinnatus
ENSVPAG00000000749CSDE17997.183ENSPEMG00000020357-10097.872Peromyscus_maniculatus_bairdii
ENSVPAG00000000749CSDE18597.653ENSPCIG00000022587CSDE110097.653Phascolarctos_cinereus
ENSVPAG00000000749CSDE17780.208ENSPFOG00000012664csde110079.276Poecilia_formosa
ENSVPAG00000000749CSDE17674.619ENSPLAG00000017680csde19374.619Poecilia_latipinna
ENSVPAG00000000749CSDE17773.659ENSPMEG00000005094csde19673.659Poecilia_mexicana
ENSVPAG00000000749CSDE18373.709ENSPREG00000011631csde110077.586Poecilia_reticulata
ENSVPAG00000000749CSDE17998.592ENSPPYG00000000996CSDE110098.592Pongo_abelii
ENSVPAG00000000749CSDE18597.183ENSPCAG00000014368CSDE110097.183Procavia_capensis
ENSVPAG00000000749CSDE15182.836ENSPCOG00000008223-8982.836Propithecus_coquereli
ENSVPAG00000000749CSDE18598.592ENSPCOG00000017893CSDE110098.592Propithecus_coquereli
ENSVPAG00000000749CSDE18596.835ENSPVAG00000008225CSDE110096.835Pteropus_vampyrus
ENSVPAG00000000749CSDE17980.420ENSPNYG00000013745csde110080.420Pundamilia_nyererei
ENSVPAG00000000749CSDE17981.206ENSPNAG00000001958csde110081.206Pygocentrus_nattereri
ENSVPAG00000000749CSDE17997.183ENSRNOG00000061058Csde110097.183Rattus_norvegicus
ENSVPAG00000000749CSDE17996.244ENSRBIG00000038088-9997.895Rhinopithecus_bieti
ENSVPAG00000000749CSDE18593.897ENSRBIG00000038966-10093.897Rhinopithecus_bieti
ENSVPAG00000000749CSDE18598.592ENSRROG00000043101CSDE110098.592Rhinopithecus_roxellana
ENSVPAG00000000749CSDE18598.122ENSSBOG00000035592CSDE110098.122Saimiri_boliviensis_boliviensis
ENSVPAG00000000749CSDE18597.183ENSSHAG00000009831CSDE110097.183Sarcophilus_harrisii
ENSVPAG00000000749CSDE17979.814ENSSFOG00015007498csde110079.814Scleropages_formosus
ENSVPAG00000000749CSDE18476.526ENSSMAG00000007203csde110080.233Scophthalmus_maximus
ENSVPAG00000000749CSDE17980.233ENSSDUG00000015380csde110080.233Seriola_dumerili
ENSVPAG00000000749CSDE17980.233ENSSLDG00000008819csde110080.233Seriola_lalandi_dorsalis
ENSVPAG00000000749CSDE18598.122ENSSARG00000000738CSDE110098.122Sorex_araneus
ENSVPAG00000000749CSDE18589.202ENSSPUG00000008714CSDE110094.159Sphenodon_punctatus
ENSVPAG00000000749CSDE17981.163ENSSPAG00000000716csde110081.163Stegastes_partitus
ENSVPAG00000000749CSDE18598.592ENSSSCG00000006752CSDE110098.592Sus_scrofa
ENSVPAG00000000749CSDE17992.019ENSTGUG00000000972CSDE110092.019Taeniopygia_guttata
ENSVPAG00000000749CSDE17978.605ENSTRUG00000007996csde110078.605Takifugu_rubripes
ENSVPAG00000000749CSDE17798.718ENSTBEG00000011880-6298.718Tupaia_belangeri
ENSVPAG00000000749CSDE18598.734ENSTTRG00000015583CSDE110098.734Tursiops_truncatus
ENSVPAG00000000749CSDE15098.392ENSUAMG00000021779-10098.392Ursus_americanus
ENSVPAG00000000749CSDE16894.565ENSUAMG00000024289-9994.565Ursus_americanus
ENSVPAG00000000749CSDE16698.780ENSUMAG00000011714-9998.780Ursus_maritimus
ENSVPAG00000000749CSDE18287.527ENSUMAG00000009720-9891.204Ursus_maritimus
ENSVPAG00000000749CSDE16597.980ENSVVUG00000009890CSDE19497.980Vulpes_vulpes
ENSVPAG00000000749CSDE17984.130ENSXETG00000021448csde110084.130Xenopus_tropicalis
ENSVPAG00000000749CSDE16180.698ENSXCOG00000000035csde18280.698Xiphophorus_couchianus
ENSVPAG00000000749CSDE18474.648ENSXMAG00000009080csde19880.698Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us