EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000000876 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 15636 bases
Position: chrGeneScaffold_88:139423-155058
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000000813	CSD	PF00313.22	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000000876	YBX3-201	846	-	ENSVPAP00000000813	281 (aa)	-	UPI00018BD3EB

Gene Model

Click here to download ENSVPAG00000000876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000000876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000000876	YBX3	100	72.535	ENSG00000060138	YBX3	57	100.000	Homo_sapiens
ENSVPAG00000000876	YBX3	100	70.671	ENSAMEG00000009393	YBX3	81	69.792	Ailuropoda_melanoleuca
ENSVPAG00000000876	YBX3	72	100.000	ENSAPLG00000003147	YBX3	65	100.000	Anas_platyrhynchos
ENSVPAG00000000876	YBX3	59	84.615	ENSANAG00000033366	-	60	83.019	Aotus_nancymaae
ENSVPAG00000000876	YBX3	100	72.535	ENSANAG00000024492	-	90	72.535	Aotus_nancymaae
ENSVPAG00000000876	YBX3	100	66.784	ENSBTAG00000009663	YBX3	75	62.847	Bos_taurus
ENSVPAG00000000876	YBX3	100	72.535	ENSCJAG00000021660	-	58	100.000	Callithrix_jacchus
ENSVPAG00000000876	YBX3	100	69.965	ENSCAFG00000013401	YBX3	80	100.000	Canis_familiaris
ENSVPAG00000000876	YBX3	100	68.905	ENSCAFG00020006412	YBX3	75	65.625	Canis_lupus_dingo
ENSVPAG00000000876	YBX3	100	69.258	ENSCHIG00000010863	YBX3	79	65.972	Capra_hircus
ENSVPAG00000000876	YBX3	100	71.831	ENSTSYG00000004204	-	68	100.000	Carlito_syrichta
ENSVPAG00000000876	YBX3	69	98.387	ENSTSYG00000035821	-	65	98.387	Carlito_syrichta
ENSVPAG00000000876	YBX3	100	67.368	ENSCAPG00000015039	YBX3	92	67.368	Cavia_aperea
ENSVPAG00000000876	YBX3	100	67.368	ENSCPOG00000011329	YBX3	64	100.000	Cavia_porcellus
ENSVPAG00000000876	YBX3	100	71.831	ENSCCAG00000016469	YBX3	57	100.000	Cebus_capucinus
ENSVPAG00000000876	YBX3	100	71.831	ENSCATG00000034411	YBX3	57	100.000	Cercocebus_atys
ENSVPAG00000000876	YBX3	100	67.254	ENSCLAG00000016030	YBX3	93	67.254	Chinchilla_lanigera
ENSVPAG00000000876	YBX3	100	72.183	ENSCSAG00000008744	YBX3	76	71.626	Chlorocebus_sabaeus
ENSVPAG00000000876	YBX3	100	61.620	ENSCPBG00000014147	YBX3	63	100.000	Chrysemys_picta_bellii
ENSVPAG00000000876	YBX3	100	72.887	ENSCANG00000036801	YBX3	71	100.000	Colobus_angolensis_palliatus
ENSVPAG00000000876	YBX3	100	70.775	ENSCGRG00001016148	Ybx3	59	100.000	Cricetulus_griseus_chok1gshd
ENSVPAG00000000876	YBX3	100	69.550	ENSCGRG00000004563	Ybx3	97	66.090	Cricetulus_griseus_crigri
ENSVPAG00000000876	YBX3	100	67.820	ENSDORG00000009103	Ybx3	80	67.820	Dipodomys_ordii
ENSVPAG00000000876	YBX3	100	63.287	ENSETEG00000002557	YBX3	99	61.620	Echinops_telfairi
ENSVPAG00000000876	YBX3	100	65.724	ENSEASG00005014726	YBX3	62	83.871	Equus_asinus_asinus
ENSVPAG00000000876	YBX3	100	69.258	ENSECAG00000013777	YBX3	76	65.972	Equus_caballus
ENSVPAG00000000876	YBX3	100	70.423	ENSEEUG00000010415	YBX3	100	70.423	Erinaceus_europaeus
ENSVPAG00000000876	YBX3	100	73.852	ENSFCAG00000027748	YBX3	57	100.000	Felis_catus
ENSVPAG00000000876	YBX3	62	100.000	ENSFALG00000003661	YBX3	64	100.000	Ficedula_albicollis
ENSVPAG00000000876	YBX3	100	66.436	ENSFDAG00000021192	YBX3	91	65.398	Fukomys_damarensis
ENSVPAG00000000876	YBX3	62	100.000	ENSGALG00000031890	YBX3	60	100.000	Gallus_gallus
ENSVPAG00000000876	YBX3	100	61.268	ENSGAGG00000017780	YBX3	63	100.000	Gopherus_agassizii
ENSVPAG00000000876	YBX3	100	72.535	ENSGGOG00000001352	YBX3	57	100.000	Gorilla_gorilla
ENSVPAG00000000876	YBX3	93	56.929	ENSHGLG00000015495	-	77	54.962	Heterocephalus_glaber_female
ENSVPAG00000000876	YBX3	100	58.020	ENSHGLG00000014798	-	84	58.703	Heterocephalus_glaber_female
ENSVPAG00000000876	YBX3	62	100.000	ENSHGLG00100003589	YBX3	70	100.000	Heterocephalus_glaber_male
ENSVPAG00000000876	YBX3	100	71.277	ENSSTOG00000032577	-	80	70.213	Ictidomys_tridecemlineatus
ENSVPAG00000000876	YBX3	100	64.583	ENSSTOG00000002108	-	87	64.236	Ictidomys_tridecemlineatus
ENSVPAG00000000876	YBX3	100	62.671	ENSJJAG00000014239	Ybx3	90	98.387	Jaculus_jaculus
ENSVPAG00000000876	YBX3	100	71.831	ENSLAFG00000017247	YBX3	83	64.894	Loxodonta_africana
ENSVPAG00000000876	YBX3	100	71.831	ENSMFAG00000039369	YBX3	57	100.000	Macaca_fascicularis
ENSVPAG00000000876	YBX3	100	71.831	ENSMMUG00000022469	YBX3	87	71.831	Macaca_mulatta
ENSVPAG00000000876	YBX3	100	72.183	ENSMNEG00000045109	YBX3	57	100.000	Macaca_nemestrina
ENSVPAG00000000876	YBX3	100	71.831	ENSMLEG00000033618	YBX3	61	100.000	Mandrillus_leucophaeus
ENSVPAG00000000876	YBX3	62	100.000	ENSMGAG00000014224	YBX3	82	100.000	Meleagris_gallopavo
ENSVPAG00000000876	YBX3	100	70.423	ENSMAUG00000012185	Ybx3	68	100.000	Mesocricetus_auratus
ENSVPAG00000000876	YBX3	100	72.535	ENSMICG00000038002	-	76	68.858	Microcebus_murinus
ENSVPAG00000000876	YBX3	100	70.775	ENSMOCG00000016291	Ybx3	73	100.000	Microtus_ochrogaster
ENSVPAG00000000876	YBX3	100	61.754	ENSMODG00000018248	YBX3	90	61.754	Monodelphis_domestica
ENSVPAG00000000876	YBX3	100	70.070	MGP_CAROLIEiJ_G0028947	Ybx3	59	100.000	Mus_caroli
ENSVPAG00000000876	YBX3	100	70.070	ENSMUSG00000030189	Ybx3	59	100.000	Mus_musculus
ENSVPAG00000000876	YBX3	100	70.775	MGP_PahariEiJ_G0022709	Ybx3	59	100.000	Mus_pahari
ENSVPAG00000000876	YBX3	100	70.423	MGP_SPRETEiJ_G0029994	Ybx3	59	100.000	Mus_spretus
ENSVPAG00000000876	YBX3	99	67.586	ENSMPUG00000011810	YBX3	77	67.586	Mustela_putorius_furo
ENSVPAG00000000876	YBX3	93	72.761	ENSMLUG00000007476	YBX3	100	70.896	Myotis_lucifugus
ENSVPAG00000000876	YBX3	99	62.807	ENSNGAG00000000710	Ybx3	71	84.127	Nannospalax_galili
ENSVPAG00000000876	YBX3	100	65.979	ENSNLEG00000034844	YBX3	63	100.000	Nomascus_leucogenys
ENSVPAG00000000876	YBX3	100	66.197	ENSODEG00000017957	YBX3	83	66.197	Octodon_degus
ENSVPAG00000000876	YBX3	96	64.706	ENSOCUG00000001889	YBX3	81	62.766	Oryctolagus_cuniculus
ENSVPAG00000000876	YBX3	100	67.354	ENSOGAG00000013245	YBX3	77	66.554	Otolemur_garnettii
ENSVPAG00000000876	YBX3	72	100.000	ENSOARG00000020919	YBX3	69	100.000	Ovis_aries
ENSVPAG00000000876	YBX3	100	72.535	ENSPPAG00000039068	YBX3	60	100.000	Pan_paniscus
ENSVPAG00000000876	YBX3	100	73.498	ENSPPRG00000005859	YBX3	57	100.000	Panthera_pardus
ENSVPAG00000000876	YBX3	100	72.792	ENSPTIG00000005322	YBX3	80	69.611	Panthera_tigris_altaica
ENSVPAG00000000876	YBX3	100	72.535	ENSPTRG00000004681	YBX3	57	100.000	Pan_troglodytes
ENSVPAG00000000876	YBX3	100	71.831	ENSPANG00000010280	YBX3	57	100.000	Papio_anubis
ENSVPAG00000000876	YBX3	60	100.000	ENSPSIG00000009247	YBX3	88	100.000	Pelodiscus_sinensis
ENSVPAG00000000876	YBX3	62	100.000	ENSPEMG00000010391	-	65	100.000	Peromyscus_maniculatus_bairdii
ENSVPAG00000000876	YBX3	100	70.423	ENSPEMG00000012132	-	69	100.000	Peromyscus_maniculatus_bairdii
ENSVPAG00000000876	YBX3	91	57.795	ENSPCIG00000029949	YBX3	100	54.373	Phascolarctos_cinereus
ENSVPAG00000000876	YBX3	100	72.183	ENSPPYG00000004279	YBX3	77	71.626	Pongo_abelii
ENSVPAG00000000876	YBX3	72	64.216	ENSPCAG00000001397	YBX3	69	63.819	Procavia_capensis
ENSVPAG00000000876	YBX3	54	58.824	ENSPCOG00000011663	YBX3	58	58.824	Propithecus_coquereli
ENSVPAG00000000876	YBX3	100	57.597	ENSPVAG00000006740	YBX3	53	66.162	Pteropus_vampyrus
ENSVPAG00000000876	YBX3	100	71.127	ENSRNOG00000005480	Ybx3	59	100.000	Rattus_norvegicus
ENSVPAG00000000876	YBX3	100	72.183	ENSRBIG00000039208	YBX3	58	100.000	Rhinopithecus_bieti
ENSVPAG00000000876	YBX3	100	72.183	ENSRROG00000029638	YBX3	58	100.000	Rhinopithecus_roxellana
ENSVPAG00000000876	YBX3	100	72.535	ENSSBOG00000030573	YBX3	58	100.000	Saimiri_boliviensis_boliviensis
ENSVPAG00000000876	YBX3	100	61.379	ENSSHAG00000003262	YBX3	97	61.379	Sarcophilus_harrisii
ENSVPAG00000000876	YBX3	100	73.145	ENSSSCG00000000633	YBX3	56	100.000	Sus_scrofa
ENSVPAG00000000876	YBX3	68	100.000	ENSTGUG00000012047	YBX3	66	100.000	Taeniopygia_guttata
ENSVPAG00000000876	YBX3	100	73.592	ENSTBEG00000012570	YBX3	78	73.592	Tupaia_belangeri
ENSVPAG00000000876	YBX3	71	100.000	ENSTTRG00000008045	YBX3	80	100.000	Tursiops_truncatus
ENSVPAG00000000876	YBX3	98	69.314	ENSUAMG00000016662	YBX3	100	66.065	Ursus_americanus
ENSVPAG00000000876	YBX3	100	73.145	ENSUMAG00000016118	YBX3	93	69.965	Ursus_maritimus
ENSVPAG00000000876	YBX3	98	68.953	ENSVVUG00000004956	YBX3	100	65.704	Vulpes_vulpes