EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000001034 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 21031 bases
Position: chrGeneScaffold_3013:1613559-1634589
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000000953	TRM13	PF05206.14	4.1e-77	1	1
ENSVPAP00000000953	zf-U11-48K	PF05253.12	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000001034	TRMT13-201	1296	-	ENSVPAP00000000953	431 (aa)	-	UPI00018BEC7B

Gene Model

Click here to download ENSVPAG00000001034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000001034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000001034	TRMT13	100	73.611	ENSG00000122435	TRMT13	90	73.611	Homo_sapiens
ENSVPAG00000001034	TRMT13	85	63.793	ENSAPOG00000015131	trmt13	81	63.793	Acanthochromis_polyacanthus
ENSVPAG00000001034	TRMT13	100	75.000	ENSAMEG00000008917	TRMT13	90	75.000	Ailuropoda_melanoleuca
ENSVPAG00000001034	TRMT13	81	84.848	ENSACIG00000005804	trmt13	73	84.848	Amphilophus_citrinellus
ENSVPAG00000001034	TRMT13	85	61.017	ENSAOCG00000023585	trmt13	92	37.768	Amphiprion_ocellaris
ENSVPAG00000001034	TRMT13	85	61.017	ENSAPEG00000004025	trmt13	92	37.393	Amphiprion_percula
ENSVPAG00000001034	TRMT13	87	62.712	ENSATEG00000006597	trmt13	90	39.640	Anabas_testudineus
ENSVPAG00000001034	TRMT13	99	55.349	ENSAPLG00000014924	TRMT13	99	55.349	Anas_platyrhynchos
ENSVPAG00000001034	TRMT13	99	53.052	ENSACAG00000003498	TRMT13	90	53.052	Anolis_carolinensis
ENSVPAG00000001034	TRMT13	100	74.074	ENSANAG00000019525	TRMT13	90	74.074	Aotus_nancymaae
ENSVPAG00000001034	TRMT13	97	41.589	ENSACLG00000020018	trmt13	89	41.589	Astatotilapia_calliptera
ENSVPAG00000001034	TRMT13	85	67.797	ENSAMXG00000017963	trmt13	78	68.966	Astyanax_mexicanus
ENSVPAG00000001034	TRMT13	100	75.463	ENSBTAG00000015781	TRMT13	90	75.463	Bos_taurus
ENSVPAG00000001034	TRMT13	100	73.148	ENSCJAG00000000200	TRMT13	90	73.148	Callithrix_jacchus
ENSVPAG00000001034	TRMT13	73	85.669	ENSCAFG00000020021	TRMT13	99	85.669	Canis_familiaris
ENSVPAG00000001034	TRMT13	52	62.332	ENSCAFG00020011572	TRMT13	78	61.778	Canis_lupus_dingo
ENSVPAG00000001034	TRMT13	100	75.406	ENSCHIG00000015395	TRMT13	90	75.406	Capra_hircus
ENSVPAG00000001034	TRMT13	99	61.916	ENSTSYG00000010811	TRMT13	91	63.279	Carlito_syrichta
ENSVPAG00000001034	TRMT13	63	100.000	ENSCAPG00000009085	TRMT13	87	100.000	Cavia_aperea
ENSVPAG00000001034	TRMT13	100	71.991	ENSCPOG00000000694	TRMT13	90	71.991	Cavia_porcellus
ENSVPAG00000001034	TRMT13	100	74.306	ENSCCAG00000023772	TRMT13	90	74.306	Cebus_capucinus
ENSVPAG00000001034	TRMT13	99	73.318	ENSCATG00000033556	TRMT13	90	73.318	Cercocebus_atys
ENSVPAG00000001034	TRMT13	99	66.979	ENSCLAG00000008220	TRMT13	100	67.681	Chinchilla_lanigera
ENSVPAG00000001034	TRMT13	100	73.843	ENSCSAG00000001506	TRMT13	90	73.843	Chlorocebus_sabaeus
ENSVPAG00000001034	TRMT13	86	87.273	ENSCPBG00000026671	TRMT13	84	87.273	Chrysemys_picta_bellii
ENSVPAG00000001034	TRMT13	100	73.843	ENSCANG00000034659	TRMT13	90	73.843	Colobus_angolensis_palliatus
ENSVPAG00000001034	TRMT13	99	69.535	ENSCGRG00001021601	Trmt13	89	69.535	Cricetulus_griseus_chok1gshd
ENSVPAG00000001034	TRMT13	54	80.172	ENSCGRG00000000093	-	90	80.172	Cricetulus_griseus_crigri
ENSVPAG00000001034	TRMT13	82	63.043	ENSCSEG00000000591	trmt13	75	63.043	Cynoglossus_semilaevis
ENSVPAG00000001034	TRMT13	97	38.479	ENSCVAG00000017342	trmt13	85	39.261	Cyprinodon_variegatus
ENSVPAG00000001034	TRMT13	98	46.604	ENSDARG00000102846	trmt13	89	46.604	Danio_rerio
ENSVPAG00000001034	TRMT13	52	60.714	ENSDNOG00000001710	TRMT13	68	60.714	Dasypus_novemcinctus
ENSVPAG00000001034	TRMT13	99	70.000	ENSDORG00000015808	Trmt13	89	70.000	Dipodomys_ordii
ENSVPAG00000001034	TRMT13	99	80.094	ENSETEG00000005819	TRMT13	88	80.094	Echinops_telfairi
ENSVPAG00000001034	TRMT13	82	69.048	ENSEBUG00000014444	trmt13	84	59.259	Eptatretus_burgeri
ENSVPAG00000001034	TRMT13	100	75.694	ENSEASG00005015918	TRMT13	90	75.694	Equus_asinus_asinus
ENSVPAG00000001034	TRMT13	100	75.694	ENSECAG00000022626	TRMT13	90	75.694	Equus_caballus
ENSVPAG00000001034	TRMT13	77	75.000	ENSEEUG00000000294	TRMT13	70	75.000	Erinaceus_europaeus
ENSVPAG00000001034	TRMT13	84	69.091	ENSELUG00000003803	trmt13	77	69.091	Esox_lucius
ENSVPAG00000001034	TRMT13	100	75.000	ENSFCAG00000030618	TRMT13	90	75.000	Felis_catus
ENSVPAG00000001034	TRMT13	99	53.596	ENSFALG00000002424	TRMT13	88	53.596	Ficedula_albicollis
ENSVPAG00000001034	TRMT13	99	72.196	ENSFDAG00000006342	TRMT13	89	72.196	Fukomys_damarensis
ENSVPAG00000001034	TRMT13	59	75.758	ENSFHEG00000022954	trmt13	68	75.758	Fundulus_heteroclitus
ENSVPAG00000001034	TRMT13	83	72.000	ENSGMOG00000013223	trmt13	79	72.000	Gadus_morhua
ENSVPAG00000001034	TRMT13	99	53.286	ENSGALG00000005290	TRMT13	88	53.791	Gallus_gallus
ENSVPAG00000001034	TRMT13	60	61.224	ENSGAFG00000001577	trmt13	58	61.224	Gambusia_affinis
ENSVPAG00000001034	TRMT13	84	63.462	ENSGACG00000013428	trmt13	70	63.462	Gasterosteus_aculeatus
ENSVPAG00000001034	TRMT13	100	59.122	ENSGAGG00000023303	TRMT13	90	59.122	Gopherus_agassizii
ENSVPAG00000001034	TRMT13	100	73.380	ENSGGOG00000005616	TRMT13	90	73.380	Gorilla_gorilla
ENSVPAG00000001034	TRMT13	97	42.056	ENSHBUG00000007754	trmt13	90	42.056	Haplochromis_burtoni
ENSVPAG00000001034	TRMT13	99	72.664	ENSHGLG00000002164	TRMT13	89	72.664	Heterocephalus_glaber_female
ENSVPAG00000001034	TRMT13	99	72.664	ENSHGLG00100001618	TRMT13	89	72.664	Heterocephalus_glaber_male
ENSVPAG00000001034	TRMT13	98	39.059	ENSHCOG00000020553	trmt13	88	39.059	Hippocampus_comes
ENSVPAG00000001034	TRMT13	98	44.787	ENSIPUG00000024787	trmt13	90	45.433	Ictalurus_punctatus
ENSVPAG00000001034	TRMT13	100	75.174	ENSSTOG00000013483	TRMT13	90	75.174	Ictidomys_tridecemlineatus
ENSVPAG00000001034	TRMT13	100	70.602	ENSJJAG00000018012	Trmt13	91	70.602	Jaculus_jaculus
ENSVPAG00000001034	TRMT13	71	45.192	ENSKMAG00000007639	trmt13	92	45.098	Kryptolebias_marmoratus
ENSVPAG00000001034	TRMT13	98	39.408	ENSLBEG00000020238	trmt13	91	39.773	Labrus_bergylta
ENSVPAG00000001034	TRMT13	97	48.810	ENSLACG00000013153	TRMT13	99	46.582	Latimeria_chalumnae
ENSVPAG00000001034	TRMT13	99	45.882	ENSLOCG00000000418	trmt13	90	46.353	Lepisosteus_oculatus
ENSVPAG00000001034	TRMT13	73	80.635	ENSLAFG00000002383	TRMT13	85	80.635	Loxodonta_africana
ENSVPAG00000001034	TRMT13	100	73.611	ENSMFAG00000034681	TRMT13	90	73.611	Macaca_fascicularis
ENSVPAG00000001034	TRMT13	100	73.611	ENSMMUG00000004243	TRMT13	90	73.611	Macaca_mulatta
ENSVPAG00000001034	TRMT13	100	73.611	ENSMNEG00000036102	TRMT13	90	73.611	Macaca_nemestrina
ENSVPAG00000001034	TRMT13	99	73.550	ENSMLEG00000034258	TRMT13	90	73.550	Mandrillus_leucophaeus
ENSVPAG00000001034	TRMT13	82	76.316	ENSMAMG00000016597	trmt13	79	76.316	Mastacembelus_armatus
ENSVPAG00000001034	TRMT13	97	41.355	ENSMZEG00005020959	trmt13	89	41.355	Maylandia_zebra
ENSVPAG00000001034	TRMT13	99	54.353	ENSMGAG00000006970	TRMT13	99	54.353	Meleagris_gallopavo
ENSVPAG00000001034	TRMT13	98	69.267	ENSMAUG00000010448	Trmt13	88	69.267	Mesocricetus_auratus
ENSVPAG00000001034	TRMT13	100	75.231	ENSMICG00000005283	TRMT13	90	75.231	Microcebus_murinus
ENSVPAG00000001034	TRMT13	100	65.429	ENSMOCG00000019914	Trmt13	90	65.429	Microtus_ochrogaster
ENSVPAG00000001034	TRMT13	100	62.125	ENSMODG00000003646	TRMT13	89	62.125	Monodelphis_domestica
ENSVPAG00000001034	TRMT13	99	42.191	ENSMALG00000020965	trmt13	90	42.191	Monopterus_albus
ENSVPAG00000001034	TRMT13	99	69.484	MGP_CAROLIEiJ_G0025568	Trmt13	88	69.484	Mus_caroli
ENSVPAG00000001034	TRMT13	99	69.393	ENSMUSG00000033439	Trmt13	89	69.393	Mus_musculus
ENSVPAG00000001034	TRMT13	99	69.159	MGP_PahariEiJ_G0027014	Trmt13	89	69.159	Mus_pahari
ENSVPAG00000001034	TRMT13	98	70.449	MGP_SPRETEiJ_G0026518	Trmt13	88	70.449	Mus_spretus
ENSVPAG00000001034	TRMT13	74	82.075	ENSMPUG00000002078	-	83	82.075	Mustela_putorius_furo
ENSVPAG00000001034	TRMT13	99	63.700	ENSMLUG00000002124	TRMT13	89	63.700	Myotis_lucifugus
ENSVPAG00000001034	TRMT13	80	75.000	ENSNBRG00000006783	trmt13	71	75.000	Neolamprologus_brichardi
ENSVPAG00000001034	TRMT13	100	73.148	ENSNLEG00000035917	TRMT13	90	73.148	Nomascus_leucogenys
ENSVPAG00000001034	TRMT13	63	81.633	ENSOPRG00000012048	TRMT13	57	81.633	Ochotona_princeps
ENSVPAG00000001034	TRMT13	84	66.667	ENSONIG00000004574	trmt13	90	42.056	Oreochromis_niloticus
ENSVPAG00000001034	TRMT13	99	59.485	ENSOANG00000012057	TRMT13	98	59.485	Ornithorhynchus_anatinus
ENSVPAG00000001034	TRMT13	100	72.622	ENSOCUG00000023095	TRMT13	90	72.622	Oryctolagus_cuniculus
ENSVPAG00000001034	TRMT13	72	44.201	ENSORLG00000003320	trmt13	70	43.354	Oryzias_latipes
ENSVPAG00000001034	TRMT13	80	63.158	ENSORLG00020005972	trmt13	77	63.158	Oryzias_latipes_hni
ENSVPAG00000001034	TRMT13	85	62.963	ENSORLG00015002270	trmt13	78	62.963	Oryzias_latipes_hsok
ENSVPAG00000001034	TRMT13	86	62.963	ENSOMEG00000006724	trmt13	76	62.963	Oryzias_melastigma
ENSVPAG00000001034	TRMT13	98	75.887	ENSOGAG00000005618	TRMT13	87	75.000	Otolemur_garnettii
ENSVPAG00000001034	TRMT13	100	75.406	ENSOARG00000017983	TRMT13	90	75.406	Ovis_aries
ENSVPAG00000001034	TRMT13	100	73.611	ENSPPAG00000043736	TRMT13	90	73.611	Pan_paniscus
ENSVPAG00000001034	TRMT13	100	75.231	ENSPPRG00000003424	TRMT13	90	75.231	Panthera_pardus
ENSVPAG00000001034	TRMT13	100	75.231	ENSPTIG00000018598	TRMT13	90	75.231	Panthera_tigris_altaica
ENSVPAG00000001034	TRMT13	100	73.843	ENSPTRG00000001001	TRMT13	90	73.843	Pan_troglodytes
ENSVPAG00000001034	TRMT13	100	73.843	ENSPANG00000007598	TRMT13	90	73.843	Papio_anubis
ENSVPAG00000001034	TRMT13	84	60.656	ENSPKIG00000001514	trmt13	78	60.656	Paramormyrops_kingsleyae
ENSVPAG00000001034	TRMT13	92	56.642	ENSPSIG00000012703	TRMT13	95	56.642	Pelodiscus_sinensis
ENSVPAG00000001034	TRMT13	86	63.158	ENSPMGG00000013298	trmt13	76	62.222	Periophthalmus_magnuspinnatus
ENSVPAG00000001034	TRMT13	100	65.893	ENSPEMG00000000275	Trmt13	90	65.893	Peromyscus_maniculatus_bairdii
ENSVPAG00000001034	TRMT13	97	36.697	ENSPMAG00000000823	trmt13	88	36.697	Petromyzon_marinus
ENSVPAG00000001034	TRMT13	99	62.093	ENSPCIG00000007699	TRMT13	90	62.269	Phascolarctos_cinereus
ENSVPAG00000001034	TRMT13	99	39.953	ENSPFOG00000008675	trmt13	88	39.953	Poecilia_formosa
ENSVPAG00000001034	TRMT13	83	61.224	ENSPLAG00000009709	trmt13	77	61.224	Poecilia_latipinna
ENSVPAG00000001034	TRMT13	84	62.264	ENSPMEG00000022954	trmt13	78	62.264	Poecilia_mexicana
ENSVPAG00000001034	TRMT13	60	61.224	ENSPREG00000005645	trmt13	63	56.897	Poecilia_reticulata
ENSVPAG00000001034	TRMT13	100	73.148	ENSPPYG00000001120	TRMT13	90	73.148	Pongo_abelii
ENSVPAG00000001034	TRMT13	100	72.454	ENSPCAG00000002340	TRMT13	90	72.454	Procavia_capensis
ENSVPAG00000001034	TRMT13	100	73.843	ENSPCOG00000017984	TRMT13	90	73.843	Propithecus_coquereli
ENSVPAG00000001034	TRMT13	100	74.537	ENSPVAG00000017430	TRMT13	90	74.537	Pteropus_vampyrus
ENSVPAG00000001034	TRMT13	80	75.000	ENSPNYG00000013690	trmt13	76	75.000	Pundamilia_nyererei
ENSVPAG00000001034	TRMT13	98	44.917	ENSPNAG00000022130	trmt13	90	44.917	Pygocentrus_nattereri
ENSVPAG00000001034	TRMT13	98	70.213	ENSRNOG00000015140	Trmt13	85	70.213	Rattus_norvegicus
ENSVPAG00000001034	TRMT13	100	73.843	ENSRBIG00000037686	TRMT13	90	73.843	Rhinopithecus_bieti
ENSVPAG00000001034	TRMT13	82	97.368	ENSRROG00000044057	TRMT13	77	97.368	Rhinopithecus_roxellana
ENSVPAG00000001034	TRMT13	72	70.000	YOL125W	-	63	70.000	Saccharomyces_cerevisiae
ENSVPAG00000001034	TRMT13	100	73.843	ENSSBOG00000026541	TRMT13	90	73.843	Saimiri_boliviensis_boliviensis
ENSVPAG00000001034	TRMT13	100	62.037	ENSSHAG00000005213	TRMT13	96	62.037	Sarcophilus_harrisii
ENSVPAG00000001034	TRMT13	84	70.370	ENSSFOG00015017560	trmt13	76	70.370	Scleropages_formosus
ENSVPAG00000001034	TRMT13	98	41.055	ENSSMAG00000014592	trmt13	95	39.907	Scophthalmus_maximus
ENSVPAG00000001034	TRMT13	85	54.839	ENSSDUG00000015508	trmt13	90	38.803	Seriola_dumerili
ENSVPAG00000001034	TRMT13	85	54.839	ENSSLDG00000019060	trmt13	89	39.729	Seriola_lalandi_dorsalis
ENSVPAG00000001034	TRMT13	99	62.207	ENSSARG00000010344	TRMT13	90	62.207	Sorex_araneus
ENSVPAG00000001034	TRMT13	99	55.869	ENSSPUG00000016339	TRMT13	93	55.869	Sphenodon_punctatus
ENSVPAG00000001034	TRMT13	98	40.278	ENSSPAG00000011922	trmt13	92	40.091	Stegastes_partitus
ENSVPAG00000001034	TRMT13	82	100.000	ENSSSCG00000006869	TRMT13	77	100.000	Sus_scrofa
ENSVPAG00000001034	TRMT13	100	54.503	ENSTGUG00000005253	TRMT13	92	54.503	Taeniopygia_guttata
ENSVPAG00000001034	TRMT13	99	39.631	ENSTRUG00000008400	trmt13	91	39.631	Takifugu_rubripes
ENSVPAG00000001034	TRMT13	96	72.596	ENSTBEG00000008911	TRMT13	100	72.596	Tupaia_belangeri
ENSVPAG00000001034	TRMT13	100	75.231	ENSUAMG00000017251	TRMT13	89	75.231	Ursus_americanus
ENSVPAG00000001034	TRMT13	100	75.231	ENSUMAG00000007901	TRMT13	99	75.231	Ursus_maritimus
ENSVPAG00000001034	TRMT13	85	96.610	ENSVVUG00000021996	TRMT13	83	96.610	Vulpes_vulpes
ENSVPAG00000001034	TRMT13	83	79.167	ENSXETG00000013204	trmt13	74	79.167	Xenopus_tropicalis
ENSVPAG00000001034	TRMT13	83	61.224	ENSXMAG00000010765	trmt13	77	61.224	Xiphophorus_maculatus