EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000001039 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 22644 bases
Position: chrGeneScaffold_3013:1700474-1723117
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000000958	RTC	PF01137.21	2.6e-55	1	1
ENSVPAP00000000958	RTC_insert	PF05189.13	4.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000001039	RTCA-201	1134	-	ENSVPAP00000000958	377 (aa)	-	UPI00018BEC7E

Gene Model

Click here to download ENSVPAG00000001039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000001039's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000001039	RTCA	87	85.152	ENSG00000137996	RTCA	87	85.174	Homo_sapiens
ENSVPAG00000001039	RTCA	84	63.722	ENSAPOG00000001345	rtca	86	63.722	Acanthochromis_polyacanthus
ENSVPAG00000001039	RTCA	71	83.643	ENSAMEG00000008855	RTCA	100	83.643	Ailuropoda_melanoleuca
ENSVPAG00000001039	RTCA	84	63.407	ENSACIG00000019643	rtca	87	63.407	Amphilophus_citrinellus
ENSVPAG00000001039	RTCA	84	63.722	ENSAOCG00000014979	rtca	86	63.722	Amphiprion_ocellaris
ENSVPAG00000001039	RTCA	84	63.722	ENSAPEG00000006945	rtca	86	63.722	Amphiprion_percula
ENSVPAG00000001039	RTCA	84	63.722	ENSATEG00000006315	rtca	87	63.722	Anabas_testudineus
ENSVPAG00000001039	RTCA	84	74.763	ENSAPLG00000015430	RTCA	90	74.763	Anas_platyrhynchos
ENSVPAG00000001039	RTCA	87	84.545	ENSANAG00000025446	RTCA	87	84.858	Aotus_nancymaae
ENSVPAG00000001039	RTCA	84	62.776	ENSACLG00000020770	rtca	86	62.776	Astatotilapia_calliptera
ENSVPAG00000001039	RTCA	84	64.669	ENSAMXG00000043271	rtca	87	64.669	Astyanax_mexicanus
ENSVPAG00000001039	RTCA	84	87.066	ENSBTAG00000006321	RTCA	87	87.066	Bos_taurus
ENSVPAG00000001039	RTCA	84	84.543	ENSCJAG00000003398	RTCA	87	84.543	Callithrix_jacchus
ENSVPAG00000001039	RTCA	84	86.120	ENSCAFG00000020010	RTCA	59	86.120	Canis_familiaris
ENSVPAG00000001039	RTCA	84	86.120	ENSCAFG00020011528	RTCA	50	86.120	Canis_lupus_dingo
ENSVPAG00000001039	RTCA	84	86.751	ENSCHIG00000018937	RTCA	87	86.751	Capra_hircus
ENSVPAG00000001039	RTCA	87	82.675	ENSTSYG00000011305	RTCA	87	83.281	Carlito_syrichta
ENSVPAG00000001039	RTCA	87	83.939	ENSCCAG00000021844	RTCA	87	84.227	Cebus_capucinus
ENSVPAG00000001039	RTCA	87	85.455	ENSCATG00000019364	RTCA	100	85.437	Cercocebus_atys
ENSVPAG00000001039	RTCA	84	84.227	ENSCLAG00000006125	RTCA	100	84.227	Chinchilla_lanigera
ENSVPAG00000001039	RTCA	84	85.489	ENSCSAG00000001509	RTCA	87	85.489	Chlorocebus_sabaeus
ENSVPAG00000001039	RTCA	84	84.227	ENSCHOG00000005211	RTCA	87	84.227	Choloepus_hoffmanni
ENSVPAG00000001039	RTCA	84	74.448	ENSCPBG00000026658	RTCA	87	74.448	Chrysemys_picta_bellii
ENSVPAG00000001039	RTCA	84	47.950	ENSCING00000007875	-	86	47.950	Ciona_intestinalis
ENSVPAG00000001039	RTCA	84	47.003	ENSCSAVG00000007269	-	86	47.003	Ciona_savignyi
ENSVPAG00000001039	RTCA	87	85.152	ENSCANG00000040106	RTCA	87	85.174	Colobus_angolensis_palliatus
ENSVPAG00000001039	RTCA	71	81.041	ENSCGRG00001013163	Rtca	85	81.041	Cricetulus_griseus_chok1gshd
ENSVPAG00000001039	RTCA	84	61.830	ENSCSEG00000000530	rtca	85	61.830	Cynoglossus_semilaevis
ENSVPAG00000001039	RTCA	61	63.793	ENSCVAG00000021809	rtca	67	63.793	Cyprinodon_variegatus
ENSVPAG00000001039	RTCA	84	65.300	ENSDARG00000002215	rtca	87	65.300	Danio_rerio
ENSVPAG00000001039	RTCA	84	84.543	ENSDNOG00000000456	RTCA	87	84.543	Dasypus_novemcinctus
ENSVPAG00000001039	RTCA	84	83.281	ENSDORG00000005448	Rtca	87	83.281	Dipodomys_ordii
ENSVPAG00000001039	RTCA	82	32.268	FBgn0025630	Rtca	85	32.268	Drosophila_melanogaster
ENSVPAG00000001039	RTCA	53	64.151	ENSEBUG00000008556	rtca	63	64.151	Eptatretus_burgeri
ENSVPAG00000001039	RTCA	84	85.804	ENSEASG00005015926	RTCA	87	85.804	Equus_asinus_asinus
ENSVPAG00000001039	RTCA	84	85.804	ENSECAG00000019831	RTCA	87	85.804	Equus_caballus
ENSVPAG00000001039	RTCA	75	74.648	ENSEEUG00000001165	RTCA	82	74.648	Erinaceus_europaeus
ENSVPAG00000001039	RTCA	84	63.091	ENSELUG00000003741	rtca	87	63.091	Esox_lucius
ENSVPAG00000001039	RTCA	84	86.435	ENSFCAG00000024460	RTCA	87	86.435	Felis_catus
ENSVPAG00000001039	RTCA	77	72.165	ENSFALG00000002443	RTCA	78	72.165	Ficedula_albicollis
ENSVPAG00000001039	RTCA	84	85.489	ENSFDAG00000012070	-	87	85.489	Fukomys_damarensis
ENSVPAG00000001039	RTCA	82	66.454	ENSFDAG00000016084	-	85	66.454	Fukomys_damarensis
ENSVPAG00000001039	RTCA	66	52.823	ENSFHEG00000002868	rtca	96	57.522	Fundulus_heteroclitus
ENSVPAG00000001039	RTCA	84	61.199	ENSGMOG00000013264	rtca	87	61.199	Gadus_morhua
ENSVPAG00000001039	RTCA	84	75.079	ENSGALG00000005277	RTCA	87	75.079	Gallus_gallus
ENSVPAG00000001039	RTCA	84	64.038	ENSGAFG00000011853	rtca	86	64.038	Gambusia_affinis
ENSVPAG00000001039	RTCA	84	62.145	ENSGACG00000013497	rtca	87	62.145	Gasterosteus_aculeatus
ENSVPAG00000001039	RTCA	57	84.332	ENSGAGG00000023306	RTCA	74	84.332	Gopherus_agassizii
ENSVPAG00000001039	RTCA	87	85.152	ENSGGOG00000009546	-	100	85.113	Gorilla_gorilla
ENSVPAG00000001039	RTCA	84	84.227	ENSGGOG00000044018	-	87	84.227	Gorilla_gorilla
ENSVPAG00000001039	RTCA	84	62.461	ENSHBUG00000002114	rtca	86	62.461	Haplochromis_burtoni
ENSVPAG00000001039	RTCA	84	83.281	ENSHGLG00000002617	RTCA	87	83.281	Heterocephalus_glaber_female
ENSVPAG00000001039	RTCA	84	83.281	ENSHGLG00100006056	RTCA	87	83.281	Heterocephalus_glaber_male
ENSVPAG00000001039	RTCA	84	56.151	ENSHCOG00000020628	rtca	77	56.151	Hippocampus_comes
ENSVPAG00000001039	RTCA	84	64.984	ENSIPUG00000024803	rtca	87	64.984	Ictalurus_punctatus
ENSVPAG00000001039	RTCA	85	76.087	ENSSTOG00000033099	-	87	76.087	Ictidomys_tridecemlineatus
ENSVPAG00000001039	RTCA	84	85.804	ENSSTOG00000013528	-	93	85.804	Ictidomys_tridecemlineatus
ENSVPAG00000001039	RTCA	84	52.532	ENSJJAG00000016178	Rtca	83	52.532	Jaculus_jaculus
ENSVPAG00000001039	RTCA	84	63.722	ENSKMAG00000006651	rtca	86	63.722	Kryptolebias_marmoratus
ENSVPAG00000001039	RTCA	84	61.514	ENSLBEG00000002448	-	98	61.514	Labrus_bergylta
ENSVPAG00000001039	RTCA	84	61.514	ENSLBEG00000028971	rtca	87	61.514	Labrus_bergylta
ENSVPAG00000001039	RTCA	84	69.716	ENSLACG00000013666	RTCA	87	69.716	Latimeria_chalumnae
ENSVPAG00000001039	RTCA	84	64.984	ENSLOCG00000000093	rtca	86	64.984	Lepisosteus_oculatus
ENSVPAG00000001039	RTCA	84	83.912	ENSLAFG00000001473	RTCA	87	83.912	Loxodonta_africana
ENSVPAG00000001039	RTCA	87	85.455	ENSMFAG00000034132	RTCA	87	85.489	Macaca_fascicularis
ENSVPAG00000001039	RTCA	87	85.152	ENSMMUG00000019105	RTCA	87	85.174	Macaca_mulatta
ENSVPAG00000001039	RTCA	82	85.437	ENSMNEG00000037163	RTCA	100	85.437	Macaca_nemestrina
ENSVPAG00000001039	RTCA	87	68.788	ENSMLEG00000042151	RTCA	84	68.788	Mandrillus_leucophaeus
ENSVPAG00000001039	RTCA	84	65.615	ENSMAMG00000016536	rtca	87	65.615	Mastacembelus_armatus
ENSVPAG00000001039	RTCA	84	62.776	ENSMZEG00005017945	rtca	86	62.776	Maylandia_zebra
ENSVPAG00000001039	RTCA	84	73.817	ENSMGAG00000006892	RTCA	99	73.817	Meleagris_gallopavo
ENSVPAG00000001039	RTCA	84	81.703	ENSMAUG00000008488	Rtca	87	81.703	Mesocricetus_auratus
ENSVPAG00000001039	RTCA	82	86.084	ENSMICG00000008643	RTCA	100	86.084	Microcebus_murinus
ENSVPAG00000001039	RTCA	84	82.334	ENSMOCG00000016660	Rtca	87	82.334	Microtus_ochrogaster
ENSVPAG00000001039	RTCA	82	63.754	ENSMMOG00000007750	rtca	100	63.754	Mola_mola
ENSVPAG00000001039	RTCA	84	81.073	ENSMODG00000003557	RTCA	87	81.073	Monodelphis_domestica
ENSVPAG00000001039	RTCA	84	65.300	ENSMALG00000020844	rtca	87	65.300	Monopterus_albus
ENSVPAG00000001039	RTCA	84	81.073	MGP_CAROLIEiJ_G0025565	Rtca	100	90.845	Mus_caroli
ENSVPAG00000001039	RTCA	84	80.442	ENSMUSG00000000339	Rtca	100	90.845	Mus_musculus
ENSVPAG00000001039	RTCA	84	80.757	MGP_PahariEiJ_G0027011	Rtca	100	90.141	Mus_pahari
ENSVPAG00000001039	RTCA	84	80.757	MGP_SPRETEiJ_G0026515	Rtca	100	90.141	Mus_spretus
ENSVPAG00000001039	RTCA	84	87.066	ENSMPUG00000012119	RTCA	87	87.066	Mustela_putorius_furo
ENSVPAG00000001039	RTCA	84	78.864	ENSMLUG00000009922	RTCA	87	78.864	Myotis_lucifugus
ENSVPAG00000001039	RTCA	85	80.864	ENSNGAG00000011540	Rtca	94	80.864	Nannospalax_galili
ENSVPAG00000001039	RTCA	84	62.776	ENSNBRG00000003062	rtca	86	62.776	Neolamprologus_brichardi
ENSVPAG00000001039	RTCA	87	85.152	ENSNLEG00000031426	RTCA	87	85.174	Nomascus_leucogenys
ENSVPAG00000001039	RTCA	71	87.732	ENSOPRG00000012092	RTCA	71	87.732	Ochotona_princeps
ENSVPAG00000001039	RTCA	84	84.227	ENSODEG00000006990	RTCA	87	84.227	Octodon_degus
ENSVPAG00000001039	RTCA	84	62.461	ENSONIG00000007753	rtca	86	62.461	Oreochromis_niloticus
ENSVPAG00000001039	RTCA	87	77.273	ENSOANG00000012055	RTCA	99	77.273	Ornithorhynchus_anatinus
ENSVPAG00000001039	RTCA	84	86.435	ENSOCUG00000014247	RTCA	87	86.435	Oryctolagus_cuniculus
ENSVPAG00000001039	RTCA	84	63.091	ENSORLG00000013605	rtca	87	63.091	Oryzias_latipes
ENSVPAG00000001039	RTCA	84	63.091	ENSORLG00020001904	rtca	87	63.091	Oryzias_latipes_hni
ENSVPAG00000001039	RTCA	84	63.091	ENSORLG00015021064	rtca	87	63.091	Oryzias_latipes_hsok
ENSVPAG00000001039	RTCA	84	64.038	ENSOMEG00000000756	rtca	87	64.038	Oryzias_melastigma
ENSVPAG00000001039	RTCA	83	74.841	ENSOGAG00000005627	RTCA	86	74.841	Otolemur_garnettii
ENSVPAG00000001039	RTCA	84	86.120	ENSOARG00000018122	RTCA	99	86.120	Ovis_aries
ENSVPAG00000001039	RTCA	87	85.152	ENSPPAG00000035119	RTCA	100	85.113	Pan_paniscus
ENSVPAG00000001039	RTCA	84	86.435	ENSPPRG00000000350	RTCA	87	86.435	Panthera_pardus
ENSVPAG00000001039	RTCA	84	86.120	ENSPTIG00000012816	RTCA	87	86.120	Panthera_tigris_altaica
ENSVPAG00000001039	RTCA	87	85.152	ENSPTRG00000001004	RTCA	100	85.113	Pan_troglodytes
ENSVPAG00000001039	RTCA	84	85.489	ENSPANG00000000346	RTCA	87	85.489	Papio_anubis
ENSVPAG00000001039	RTCA	84	66.562	ENSPKIG00000001653	rtca	87	66.562	Paramormyrops_kingsleyae
ENSVPAG00000001039	RTCA	84	74.763	ENSPSIG00000011408	RTCA	87	74.763	Pelodiscus_sinensis
ENSVPAG00000001039	RTCA	84	81.388	ENSPEMG00000018582	Rtca	87	81.388	Peromyscus_maniculatus_bairdii
ENSVPAG00000001039	RTCA	84	51.572	ENSPMAG00000009110	rtca	87	51.572	Petromyzon_marinus
ENSVPAG00000001039	RTCA	84	82.019	ENSPCIG00000007684	RTCA	87	82.019	Phascolarctos_cinereus
ENSVPAG00000001039	RTCA	84	64.375	ENSPFOG00000004824	rtca	87	64.375	Poecilia_formosa
ENSVPAG00000001039	RTCA	84	64.669	ENSPLAG00000011753	rtca	86	64.669	Poecilia_latipinna
ENSVPAG00000001039	RTCA	84	64.669	ENSPMEG00000020469	rtca	86	64.669	Poecilia_mexicana
ENSVPAG00000001039	RTCA	84	65.300	ENSPREG00000001365	rtca	86	65.300	Poecilia_reticulata
ENSVPAG00000001039	RTCA	84	85.174	ENSPPYG00000001115	RTCA	87	85.174	Pongo_abelii
ENSVPAG00000001039	RTCA	84	86.120	ENSPCAG00000005076	RTCA	87	86.120	Procavia_capensis
ENSVPAG00000001039	RTCA	84	86.120	ENSPCOG00000005603	RTCA	87	86.120	Propithecus_coquereli
ENSVPAG00000001039	RTCA	87	84.545	ENSPVAG00000009478	RTCA	87	84.545	Pteropus_vampyrus
ENSVPAG00000001039	RTCA	84	62.776	ENSPNYG00000004722	rtca	86	62.776	Pundamilia_nyererei
ENSVPAG00000001039	RTCA	84	65.300	ENSPNAG00000022270	rtca	87	65.300	Pygocentrus_nattereri
ENSVPAG00000001039	RTCA	84	81.703	ENSRNOG00000014575	Rtca	87	81.703	Rattus_norvegicus
ENSVPAG00000001039	RTCA	87	84.545	ENSRBIG00000041180	RTCA	100	84.466	Rhinopithecus_bieti
ENSVPAG00000001039	RTCA	87	84.545	ENSRROG00000024929	RTCA	87	84.545	Rhinopithecus_roxellana
ENSVPAG00000001039	RTCA	87	83.636	ENSSBOG00000028626	RTCA	87	84.227	Saimiri_boliviensis_boliviensis
ENSVPAG00000001039	RTCA	84	81.388	ENSSHAG00000001758	RTCA	87	81.388	Sarcophilus_harrisii
ENSVPAG00000001039	RTCA	84	62.145	ENSSMAG00000014680	rtca	85	62.145	Scophthalmus_maximus
ENSVPAG00000001039	RTCA	84	63.722	ENSSDUG00000015585	rtca	85	63.722	Seriola_dumerili
ENSVPAG00000001039	RTCA	84	63.407	ENSSLDG00000018985	rtca	86	63.407	Seriola_lalandi_dorsalis
ENSVPAG00000001039	RTCA	84	76.972	ENSSARG00000013993	RTCA	100	76.972	Sorex_araneus
ENSVPAG00000001039	RTCA	84	63.407	ENSSPAG00000011938	rtca	86	63.407	Stegastes_partitus
ENSVPAG00000001039	RTCA	84	87.697	ENSSSCG00000006865	RTCA	87	87.697	Sus_scrofa
ENSVPAG00000001039	RTCA	84	74.448	ENSTGUG00000005154	RTCA	87	74.448	Taeniopygia_guttata
ENSVPAG00000001039	RTCA	84	64.038	ENSTRUG00000008799	rtca	87	64.038	Takifugu_rubripes
ENSVPAG00000001039	RTCA	84	64.353	ENSTNIG00000004725	rtca	87	64.353	Tetraodon_nigroviridis
ENSVPAG00000001039	RTCA	87	86.061	ENSTTRG00000015327	RTCA	87	86.061	Tursiops_truncatus
ENSVPAG00000001039	RTCA	77	82.653	ENSUAMG00000017265	RTCA	83	82.653	Ursus_americanus
ENSVPAG00000001039	RTCA	84	85.804	ENSUMAG00000007881	RTCA	87	85.804	Ursus_maritimus
ENSVPAG00000001039	RTCA	84	85.804	ENSVVUG00000022041	RTCA	58	85.804	Vulpes_vulpes
ENSVPAG00000001039	RTCA	83	57.500	ENSXETG00000031661	RTCA	89	54.747	Xenopus_tropicalis
ENSVPAG00000001039	RTCA	84	60.252	ENSXCOG00000008002	rtca	86	60.252	Xiphophorus_couchianus
ENSVPAG00000001039	RTCA	84	64.353	ENSXMAG00000005482	rtca	86	64.353	Xiphophorus_maculatus