EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000001066 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 5347 bases
Position: chrGeneScaffold_2476:31060-36406
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000000982	PseudoU_synth_2	PF00849.22	4.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000001066	RPUSD4-201	792	-	ENSVPAP00000000982	264 (aa)	-	UPI00018BCE71

Gene Model

Click here to download ENSVPAG00000001066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000001066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000001066	RPUSD4	100	80.377	ENSG00000165526	RPUSD4	99	69.355	Homo_sapiens
ENSVPAG00000001066	RPUSD4	89	47.083	ENSAPOG00000011024	rpusd4	56	47.321	Acanthochromis_polyacanthus
ENSVPAG00000001066	RPUSD4	54	78.873	ENSAMEG00000005953	-	60	78.873	Ailuropoda_melanoleuca
ENSVPAG00000001066	RPUSD4	100	85.660	ENSAMEG00000000127	-	70	85.660	Ailuropoda_melanoleuca
ENSVPAG00000001066	RPUSD4	81	47.273	ENSACIG00000003533	rpusd4	64	47.273	Amphilophus_citrinellus
ENSVPAG00000001066	RPUSD4	88	48.523	ENSAOCG00000015409	rpusd4	55	48.869	Amphiprion_ocellaris
ENSVPAG00000001066	RPUSD4	88	48.945	ENSAPEG00000018935	rpusd4	55	49.321	Amphiprion_percula
ENSVPAG00000001066	RPUSD4	88	48.945	ENSATEG00000008059	rpusd4	59	48.945	Anabas_testudineus
ENSVPAG00000001066	RPUSD4	69	61.413	ENSAPLG00000013250	RPUSD4	67	60.000	Anas_platyrhynchos
ENSVPAG00000001066	RPUSD4	100	58.427	ENSACAG00000000189	RPUSD4	72	58.427	Anolis_carolinensis
ENSVPAG00000001066	RPUSD4	100	80.755	ENSANAG00000024050	RPUSD4	71	80.755	Aotus_nancymaae
ENSVPAG00000001066	RPUSD4	84	50.000	ENSACLG00000020996	rpusd4	58	50.000	Astatotilapia_calliptera
ENSVPAG00000001066	RPUSD4	100	46.863	ENSAMXG00000031479	rpusd4	68	50.209	Astyanax_mexicanus
ENSVPAG00000001066	RPUSD4	100	85.283	ENSBTAG00000020900	RPUSD4	70	85.283	Bos_taurus
ENSVPAG00000001066	RPUSD4	100	80.377	ENSCJAG00000042850	RPUSD4	67	80.377	Callithrix_jacchus
ENSVPAG00000001066	RPUSD4	100	84.586	ENSCAFG00000010488	RPUSD4	70	84.586	Canis_familiaris
ENSVPAG00000001066	RPUSD4	100	84.586	ENSCAFG00020010621	RPUSD4	70	84.586	Canis_lupus_dingo
ENSVPAG00000001066	RPUSD4	100	86.090	ENSCHIG00000009975	RPUSD4	70	86.090	Capra_hircus
ENSVPAG00000001066	RPUSD4	100	84.848	ENSTSYG00000008456	RPUSD4	70	84.848	Carlito_syrichta
ENSVPAG00000001066	RPUSD4	55	86.301	ENSCAPG00000006040	RPUSD4	58	86.301	Cavia_aperea
ENSVPAG00000001066	RPUSD4	100	82.955	ENSCPOG00000014971	RPUSD4	70	82.955	Cavia_porcellus
ENSVPAG00000001066	RPUSD4	100	80.755	ENSCCAG00000027838	RPUSD4	71	80.755	Cebus_capucinus
ENSVPAG00000001066	RPUSD4	100	80.377	ENSCATG00000041570	RPUSD4	70	80.377	Cercocebus_atys
ENSVPAG00000001066	RPUSD4	100	86.038	ENSCLAG00000016553	RPUSD4	70	86.038	Chinchilla_lanigera
ENSVPAG00000001066	RPUSD4	100	80.377	ENSCSAG00000002274	RPUSD4	70	80.377	Chlorocebus_sabaeus
ENSVPAG00000001066	RPUSD4	65	88.304	ENSCHOG00000010249	RPUSD4	60	88.304	Choloepus_hoffmanni
ENSVPAG00000001066	RPUSD4	71	68.783	ENSCPBG00000011175	RPUSD4	65	68.783	Chrysemys_picta_bellii
ENSVPAG00000001066	RPUSD4	100	78.868	ENSCANG00000039684	RPUSD4	70	78.868	Colobus_angolensis_palliatus
ENSVPAG00000001066	RPUSD4	100	83.019	ENSCGRG00001024141	Rpusd4	70	83.019	Cricetulus_griseus_chok1gshd
ENSVPAG00000001066	RPUSD4	100	83.019	ENSCGRG00000014415	Rpusd4	70	83.019	Cricetulus_griseus_crigri
ENSVPAG00000001066	RPUSD4	66	46.629	ENSCSEG00000006462	-	78	46.629	Cynoglossus_semilaevis
ENSVPAG00000001066	RPUSD4	87	48.305	ENSCVAG00000000392	rpusd4	62	48.636	Cyprinodon_variegatus
ENSVPAG00000001066	RPUSD4	87	47.881	ENSCVAG00000008761	rpusd4	56	48.182	Cyprinodon_variegatus
ENSVPAG00000001066	RPUSD4	84	49.115	ENSDARG00000012674	rpusd4	63	49.558	Danio_rerio
ENSVPAG00000001066	RPUSD4	100	80.377	ENSDNOG00000020026	RPUSD4	70	80.377	Dasypus_novemcinctus
ENSVPAG00000001066	RPUSD4	100	81.509	ENSDORG00000016717	Rpusd4	70	81.509	Dipodomys_ordii
ENSVPAG00000001066	RPUSD4	100	81.818	ENSETEG00000013953	RPUSD4	70	81.818	Echinops_telfairi
ENSVPAG00000001066	RPUSD4	100	86.038	ENSEASG00005022982	RPUSD4	70	86.038	Equus_asinus_asinus
ENSVPAG00000001066	RPUSD4	100	85.660	ENSECAG00000000557	RPUSD4	70	85.660	Equus_caballus
ENSVPAG00000001066	RPUSD4	74	84.810	ENSEEUG00000014036	RPUSD4	52	84.810	Erinaceus_europaeus
ENSVPAG00000001066	RPUSD4	88	51.626	ENSELUG00000008075	rpusd4	64	51.626	Esox_lucius
ENSVPAG00000001066	RPUSD4	100	83.396	ENSFCAG00000029789	RPUSD4	70	83.396	Felis_catus
ENSVPAG00000001066	RPUSD4	88	57.627	ENSFALG00000005171	RPUSD4	70	57.627	Ficedula_albicollis
ENSVPAG00000001066	RPUSD4	100	83.774	ENSFDAG00000014307	RPUSD4	70	83.774	Fukomys_damarensis
ENSVPAG00000001066	RPUSD4	89	46.245	ENSFHEG00000004329	rpusd4	62	46.250	Fundulus_heteroclitus
ENSVPAG00000001066	RPUSD4	85	47.598	ENSGMOG00000017726	rpusd4	68	47.598	Gadus_morhua
ENSVPAG00000001066	RPUSD4	87	57.143	ENSGALG00000024326	RPUSD4	67	58.678	Gallus_gallus
ENSVPAG00000001066	RPUSD4	88	45.041	ENSGAFG00000021559	rpusd4	62	45.041	Gambusia_affinis
ENSVPAG00000001066	RPUSD4	90	48.560	ENSGACG00000001657	rpusd4	72	48.560	Gasterosteus_aculeatus
ENSVPAG00000001066	RPUSD4	89	63.025	ENSGAGG00000000132	RPUSD4	66	63.025	Gopherus_agassizii
ENSVPAG00000001066	RPUSD4	100	80.000	ENSGGOG00000016494	RPUSD4	70	80.000	Gorilla_gorilla
ENSVPAG00000001066	RPUSD4	84	50.000	ENSHBUG00000022838	rpusd4	58	50.000	Haplochromis_burtoni
ENSVPAG00000001066	RPUSD4	100	83.774	ENSHGLG00000002285	RPUSD4	70	83.774	Heterocephalus_glaber_female
ENSVPAG00000001066	RPUSD4	100	83.774	ENSHGLG00100006385	RPUSD4	70	83.774	Heterocephalus_glaber_male
ENSVPAG00000001066	RPUSD4	85	47.391	ENSHCOG00000006612	rpusd4	58	47.391	Hippocampus_comes
ENSVPAG00000001066	RPUSD4	86	52.174	ENSIPUG00000023879	rusd4	60	52.174	Ictalurus_punctatus
ENSVPAG00000001066	RPUSD4	100	83.712	ENSSTOG00000025280	RPUSD4	73	83.712	Ictidomys_tridecemlineatus
ENSVPAG00000001066	RPUSD4	100	84.091	ENSJJAG00000018673	Rpusd4	71	84.091	Jaculus_jaculus
ENSVPAG00000001066	RPUSD4	85	48.261	ENSKMAG00000021805	rpusd4	60	48.261	Kryptolebias_marmoratus
ENSVPAG00000001066	RPUSD4	85	50.000	ENSLBEG00000020394	rpusd4	64	50.000	Labrus_bergylta
ENSVPAG00000001066	RPUSD4	85	60.619	ENSLACG00000011028	RPUSD4	60	58.996	Latimeria_chalumnae
ENSVPAG00000001066	RPUSD4	77	57.353	ENSLOCG00000003124	rpusd4	56	57.073	Lepisosteus_oculatus
ENSVPAG00000001066	RPUSD4	100	82.576	ENSLAFG00000005211	RPUSD4	70	82.576	Loxodonta_africana
ENSVPAG00000001066	RPUSD4	100	80.377	ENSMFAG00000039513	RPUSD4	70	80.377	Macaca_fascicularis
ENSVPAG00000001066	RPUSD4	100	80.000	ENSMMUG00000007933	RPUSD4	90	76.730	Macaca_mulatta
ENSVPAG00000001066	RPUSD4	100	80.377	ENSMNEG00000027414	RPUSD4	70	80.377	Macaca_nemestrina
ENSVPAG00000001066	RPUSD4	100	80.000	ENSMLEG00000042461	RPUSD4	70	80.000	Mandrillus_leucophaeus
ENSVPAG00000001066	RPUSD4	91	45.020	ENSMAMG00000023839	rpusd4	60	46.581	Mastacembelus_armatus
ENSVPAG00000001066	RPUSD4	84	50.000	ENSMZEG00005011999	rpusd4	58	50.000	Maylandia_zebra
ENSVPAG00000001066	RPUSD4	68	63.736	ENSMGAG00000000840	RPUSD4	69	59.735	Meleagris_gallopavo
ENSVPAG00000001066	RPUSD4	100	80.000	ENSMAUG00000010280	Rpusd4	70	80.000	Mesocricetus_auratus
ENSVPAG00000001066	RPUSD4	100	86.038	ENSMICG00000015979	RPUSD4	70	86.038	Microcebus_murinus
ENSVPAG00000001066	RPUSD4	100	77.068	ENSMOCG00000000661	Rpusd4	70	77.068	Microtus_ochrogaster
ENSVPAG00000001066	RPUSD4	74	53.234	ENSMMOG00000021731	rpusd4	59	53.234	Mola_mola
ENSVPAG00000001066	RPUSD4	92	75.918	ENSMODG00000004521	RPUSD4	63	75.918	Monodelphis_domestica
ENSVPAG00000001066	RPUSD4	76	49.515	ENSMALG00000005839	rpusd4	67	47.534	Monopterus_albus
ENSVPAG00000001066	RPUSD4	100	81.509	MGP_CAROLIEiJ_G0031954	Rpusd4	70	81.509	Mus_caroli
ENSVPAG00000001066	RPUSD4	100	81.132	ENSMUSG00000032044	Rpusd4	70	81.132	Mus_musculus
ENSVPAG00000001066	RPUSD4	100	82.264	MGP_PahariEiJ_G0014819	Rpusd4	70	82.264	Mus_pahari
ENSVPAG00000001066	RPUSD4	100	80.755	MGP_SPRETEiJ_G0033078	Rpusd4	70	80.755	Mus_spretus
ENSVPAG00000001066	RPUSD4	100	81.887	ENSMPUG00000006608	RPUSD4	70	81.887	Mustela_putorius_furo
ENSVPAG00000001066	RPUSD4	100	83.083	ENSMLUG00000017328	-	70	83.083	Myotis_lucifugus
ENSVPAG00000001066	RPUSD4	59	85.806	ENSMLUG00000029348	-	61	85.806	Myotis_lucifugus
ENSVPAG00000001066	RPUSD4	100	81.509	ENSNGAG00000020847	Rpusd4	70	81.509	Nannospalax_galili
ENSVPAG00000001066	RPUSD4	84	50.439	ENSNBRG00000005207	rpusd4	66	50.439	Neolamprologus_brichardi
ENSVPAG00000001066	RPUSD4	100	80.827	ENSNLEG00000007465	RPUSD4	70	80.827	Nomascus_leucogenys
ENSVPAG00000001066	RPUSD4	100	70.566	ENSMEUG00000004370	RPUSD4	69	70.566	Notamacropus_eugenii
ENSVPAG00000001066	RPUSD4	100	62.879	ENSOPRG00000013141	-	100	62.879	Ochotona_princeps
ENSVPAG00000001066	RPUSD4	100	82.642	ENSODEG00000004577	RPUSD4	70	82.642	Octodon_degus
ENSVPAG00000001066	RPUSD4	89	49.174	ENSONIG00000018879	rpusd4	65	49.174	Oreochromis_niloticus
ENSVPAG00000001066	RPUSD4	75	72.589	ENSOANG00000007247	RPUSD4	63	72.589	Ornithorhynchus_anatinus
ENSVPAG00000001066	RPUSD4	100	85.985	ENSOCUG00000017039	RPUSD4	70	85.985	Oryctolagus_cuniculus
ENSVPAG00000001066	RPUSD4	89	46.058	ENSORLG00000002750	rpusd4	65	46.058	Oryzias_latipes
ENSVPAG00000001066	RPUSD4	80	46.789	ENSORLG00020002044	rpusd4	55	46.789	Oryzias_latipes_hni
ENSVPAG00000001066	RPUSD4	85	46.288	ENSORLG00015020034	rpusd4	57	46.288	Oryzias_latipes_hsok
ENSVPAG00000001066	RPUSD4	87	48.936	ENSOMEG00000004861	rpusd4	58	48.936	Oryzias_melastigma
ENSVPAG00000001066	RPUSD4	100	81.955	ENSOGAG00000008922	RPUSD4	70	81.955	Otolemur_garnettii
ENSVPAG00000001066	RPUSD4	97	86.770	ENSOARG00000012238	RPUSD4	70	85.660	Ovis_aries
ENSVPAG00000001066	RPUSD4	100	80.755	ENSPPAG00000042883	RPUSD4	65	80.755	Pan_paniscus
ENSVPAG00000001066	RPUSD4	100	83.774	ENSPPRG00000003081	RPUSD4	70	83.774	Panthera_pardus
ENSVPAG00000001066	RPUSD4	100	83.774	ENSPTIG00000012059	RPUSD4	70	83.774	Panthera_tigris_altaica
ENSVPAG00000001066	RPUSD4	100	80.377	ENSPTRG00000004454	RPUSD4	70	80.377	Pan_troglodytes
ENSVPAG00000001066	RPUSD4	100	80.755	ENSPANG00000015040	RPUSD4	70	80.755	Papio_anubis
ENSVPAG00000001066	RPUSD4	89	58.159	ENSPKIG00000023986	rpusd4	61	58.159	Paramormyrops_kingsleyae
ENSVPAG00000001066	RPUSD4	76	66.010	ENSPSIG00000014268	RPUSD4	64	66.010	Pelodiscus_sinensis
ENSVPAG00000001066	RPUSD4	93	44.488	ENSPMGG00000002806	rpusd4	71	44.488	Periophthalmus_magnuspinnatus
ENSVPAG00000001066	RPUSD4	100	81.132	ENSPEMG00000000278	Rpusd4	75	81.132	Peromyscus_maniculatus_bairdii
ENSVPAG00000001066	RPUSD4	77	44.643	ENSPMAG00000008183	rpusd4	60	44.660	Petromyzon_marinus
ENSVPAG00000001066	RPUSD4	100	71.698	ENSPCIG00000010212	RPUSD4	71	71.698	Phascolarctos_cinereus
ENSVPAG00000001066	RPUSD4	88	47.107	ENSPFOG00000019030	rpusd4	63	47.107	Poecilia_formosa
ENSVPAG00000001066	RPUSD4	88	47.521	ENSPLAG00000016848	rpusd4	62	47.521	Poecilia_latipinna
ENSVPAG00000001066	RPUSD4	88	46.694	ENSPMEG00000017534	rpusd4	62	46.694	Poecilia_mexicana
ENSVPAG00000001066	RPUSD4	88	46.694	ENSPREG00000005689	rpusd4	62	46.694	Poecilia_reticulata
ENSVPAG00000001066	RPUSD4	100	81.887	ENSPPYG00000004043	RPUSD4	70	81.887	Pongo_abelii
ENSVPAG00000001066	RPUSD4	74	84.810	ENSPCAG00000000753	RPUSD4	53	84.810	Procavia_capensis
ENSVPAG00000001066	RPUSD4	100	75.472	ENSPCOG00000020694	RPUSD4	69	75.472	Propithecus_coquereli
ENSVPAG00000001066	RPUSD4	100	84.151	ENSPVAG00000000988	RPUSD4	71	84.151	Pteropus_vampyrus
ENSVPAG00000001066	RPUSD4	84	49.123	ENSPNYG00000009652	rpusd4	58	49.123	Pundamilia_nyererei
ENSVPAG00000001066	RPUSD4	88	51.064	ENSPNAG00000012264	rpusd4	62	51.064	Pygocentrus_nattereri
ENSVPAG00000001066	RPUSD4	100	81.887	ENSRNOG00000011567	Rpusd4	70	81.887	Rattus_norvegicus
ENSVPAG00000001066	RPUSD4	100	81.132	ENSRBIG00000034842	RPUSD4	70	81.132	Rhinopithecus_bieti
ENSVPAG00000001066	RPUSD4	100	81.132	ENSRROG00000039753	RPUSD4	70	81.132	Rhinopithecus_roxellana
ENSVPAG00000001066	RPUSD4	100	80.000	ENSSBOG00000030413	RPUSD4	71	80.000	Saimiri_boliviensis_boliviensis
ENSVPAG00000001066	RPUSD4	77	75.862	ENSSHAG00000008304	RPUSD4	67	75.862	Sarcophilus_harrisii
ENSVPAG00000001066	RPUSD4	88	54.583	ENSSFOG00015006203	rpusd4	65	55.417	Scleropages_formosus
ENSVPAG00000001066	RPUSD4	88	50.000	ENSSMAG00000020978	rpusd4	64	50.000	Scophthalmus_maximus
ENSVPAG00000001066	RPUSD4	81	48.416	ENSSDUG00000013399	rpusd4	58	48.416	Seriola_dumerili
ENSVPAG00000001066	RPUSD4	83	48.444	ENSSLDG00000023507	rpusd4	59	48.444	Seriola_lalandi_dorsalis
ENSVPAG00000001066	RPUSD4	89	58.506	ENSSPUG00000001401	RPUSD4	66	59.833	Sphenodon_punctatus
ENSVPAG00000001066	RPUSD4	90	48.361	ENSSPAG00000012163	rpusd4	63	48.361	Stegastes_partitus
ENSVPAG00000001066	RPUSD4	100	86.742	ENSSSCG00000015233	RPUSD4	70	86.742	Sus_scrofa
ENSVPAG00000001066	RPUSD4	77	59.314	ENSTGUG00000000773	RPUSD4	69	59.314	Taeniopygia_guttata
ENSVPAG00000001066	RPUSD4	85	48.035	ENSTRUG00000012283	rpusd4	59	48.035	Takifugu_rubripes
ENSVPAG00000001066	RPUSD4	91	46.559	ENSTNIG00000014676	rpusd4	63	46.559	Tetraodon_nigroviridis
ENSVPAG00000001066	RPUSD4	100	86.364	ENSTTRG00000001555	RPUSD4	70	86.364	Tursiops_truncatus
ENSVPAG00000001066	RPUSD4	70	86.022	ENSUAMG00000005503	-	97	86.022	Ursus_americanus
ENSVPAG00000001066	RPUSD4	100	85.660	ENSUMAG00000002219	RPUSD4	70	85.660	Ursus_maritimus
ENSVPAG00000001066	RPUSD4	100	84.211	ENSVVUG00000020101	RPUSD4	70	84.211	Vulpes_vulpes
ENSVPAG00000001066	RPUSD4	87	47.917	ENSXCOG00000004676	rpusd4	63	47.500	Xiphophorus_couchianus
ENSVPAG00000001066	RPUSD4	87	47.917	ENSXMAG00000023351	rpusd4	61	47.917	Xiphophorus_maculatus