EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000001164 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 85090 bases
Position: chrGeneScaffold_2224:61896-146985
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000001076	Npa1	PF11707.8	2.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000001167	URB1-201	6789	-	ENSVPAP00000001076	2263 (aa)	-	UPI00018BCD56

Gene Model

Click here to download ENSVPAG00000001164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000001164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000001164	URB1	68	88.889	ENSG00000142207	URB1	68	88.889	Homo_sapiens
ENSVPAG00000001164	URB1	64	62.400	ENSAPOG00000020308	urb1	66	62.400	Acanthochromis_polyacanthus
ENSVPAG00000001164	URB1	68	91.270	ENSAMEG00000011998	URB1	68	91.270	Ailuropoda_melanoleuca
ENSVPAG00000001164	URB1	59	70.833	ENSACIG00000003248	urb1	60	70.833	Amphilophus_citrinellus
ENSVPAG00000001164	URB1	63	62.400	ENSAOCG00000010364	urb1	67	62.400	Amphiprion_ocellaris
ENSVPAG00000001164	URB1	61	62.400	ENSAPEG00000010758	urb1	64	62.400	Amphiprion_percula
ENSVPAG00000001164	URB1	66	70.833	ENSATEG00000011790	urb1	62	70.833	Anabas_testudineus
ENSVPAG00000001164	URB1	65	73.611	ENSAPLG00000012791	URB1	67	73.611	Anas_platyrhynchos
ENSVPAG00000001164	URB1	68	71.233	ENSACAG00000002817	URB1	71	71.233	Anolis_carolinensis
ENSVPAG00000001164	URB1	68	87.500	ENSANAG00000024617	URB1	68	87.500	Aotus_nancymaae
ENSVPAG00000001164	URB1	67	60.800	ENSACLG00000024865	urb1	67	60.800	Astatotilapia_calliptera
ENSVPAG00000001164	URB1	65	60.563	ENSAMXG00000012306	urb1	64	60.563	Astyanax_mexicanus
ENSVPAG00000001164	URB1	68	92.857	ENSBTAG00000012412	URB1	68	92.857	Bos_taurus
ENSVPAG00000001164	URB1	68	87.500	ENSCJAG00000009118	URB1	68	87.500	Callithrix_jacchus
ENSVPAG00000001164	URB1	68	91.270	ENSCAFG00000008892	URB1	68	91.270	Canis_familiaris
ENSVPAG00000001164	URB1	68	90.426	ENSCAFG00020025994	-	68	90.426	Canis_lupus_dingo
ENSVPAG00000001164	URB1	68	91.270	ENSCAFG00020025987	-	68	91.270	Canis_lupus_dingo
ENSVPAG00000001164	URB1	68	91.667	ENSCHIG00000015645	URB1	69	91.667	Capra_hircus
ENSVPAG00000001164	URB1	68	89.683	ENSTSYG00000013286	URB1	68	89.683	Carlito_syrichta
ENSVPAG00000001164	URB1	69	95.652	ENSCAPG00000015589	URB1	70	95.652	Cavia_aperea
ENSVPAG00000001164	URB1	71	90.345	ENSCPOG00000006748	URB1	69	90.345	Cavia_porcellus
ENSVPAG00000001164	URB1	68	87.234	ENSCCAG00000021299	URB1	68	87.234	Cebus_capucinus
ENSVPAG00000001164	URB1	68	87.302	ENSCATG00000042630	URB1	68	87.302	Cercocebus_atys
ENSVPAG00000001164	URB1	68	88.435	ENSCLAG00000005262	URB1	68	88.435	Chinchilla_lanigera
ENSVPAG00000001164	URB1	68	88.194	ENSCSAG00000009584	URB1	68	88.194	Chlorocebus_sabaeus
ENSVPAG00000001164	URB1	68	71.918	ENSCPBG00000006454	URB1	68	71.918	Chrysemys_picta_bellii
ENSVPAG00000001164	URB1	68	88.889	ENSCANG00000031088	URB1	68	88.889	Colobus_angolensis_palliatus
ENSVPAG00000001164	URB1	67	84.127	ENSCGRG00001010616	Urb1	68	84.127	Cricetulus_griseus_chok1gshd
ENSVPAG00000001164	URB1	66	84.127	ENSCGRG00000015840	Urb1	68	84.127	Cricetulus_griseus_crigri
ENSVPAG00000001164	URB1	64	59.028	ENSCSEG00000012616	urb1	64	58.400	Cynoglossus_semilaevis
ENSVPAG00000001164	URB1	64	65.278	ENSCVAG00000009076	urb1	69	65.278	Cyprinodon_variegatus
ENSVPAG00000001164	URB1	64	67.470	ENSDARG00000060308	urb1	63	68.675	Danio_rerio
ENSVPAG00000001164	URB1	56	87.302	ENSDNOG00000015586	URB1	66	87.302	Dasypus_novemcinctus
ENSVPAG00000001164	URB1	68	87.302	ENSDORG00000006735	Urb1	68	87.302	Dipodomys_ordii
ENSVPAG00000001164	URB1	63	81.048	ENSETEG00000009080	URB1	64	81.048	Echinops_telfairi
ENSVPAG00000001164	URB1	68	93.043	ENSEASG00005007711	URB1	68	92.553	Equus_asinus_asinus
ENSVPAG00000001164	URB1	68	93.043	ENSECAG00000013206	URB1	73	92.063	Equus_caballus
ENSVPAG00000001164	URB1	64	65.972	ENSELUG00000020516	urb1	65	65.278	Esox_lucius
ENSVPAG00000001164	URB1	68	90.476	ENSFCAG00000002177	URB1	68	90.476	Felis_catus
ENSVPAG00000001164	URB1	64	71.918	ENSFALG00000004636	URB1	66	71.918	Ficedula_albicollis
ENSVPAG00000001164	URB1	68	89.116	ENSFDAG00000007288	URB1	65	89.116	Fukomys_damarensis
ENSVPAG00000001164	URB1	59	69.048	ENSFHEG00000000202	urb1	67	69.048	Fundulus_heteroclitus
ENSVPAG00000001164	URB1	58	56.944	ENSGMOG00000001838	urb1	59	56.944	Gadus_morhua
ENSVPAG00000001164	URB1	67	73.288	ENSGALG00000015887	URB1	67	73.288	Gallus_gallus
ENSVPAG00000001164	URB1	66	61.806	ENSGAFG00000020694	urb1	66	61.806	Gambusia_affinis
ENSVPAG00000001164	URB1	69	63.636	ENSGACG00000011703	urb1	70	63.636	Gasterosteus_aculeatus
ENSVPAG00000001164	URB1	68	71.918	ENSGAGG00000022544	URB1	68	71.918	Gopherus_agassizii
ENSVPAG00000001164	URB1	68	88.095	ENSGGOG00000000285	URB1	68	88.095	Gorilla_gorilla
ENSVPAG00000001164	URB1	67	60.800	ENSHBUG00000001904	urb1	67	60.800	Haplochromis_burtoni
ENSVPAG00000001164	URB1	68	88.095	ENSHGLG00000004907	URB1	67	88.095	Heterocephalus_glaber_female
ENSVPAG00000001164	URB1	68	88.095	ENSHGLG00100010749	URB1	68	88.095	Heterocephalus_glaber_male
ENSVPAG00000001164	URB1	62	56.061	ENSIPUG00000014721	urb1	63	56.061	Ictalurus_punctatus
ENSVPAG00000001164	URB1	68	90.476	ENSSTOG00000004539	URB1	68	90.476	Ictidomys_tridecemlineatus
ENSVPAG00000001164	URB1	61	61.379	ENSKMAG00000006001	urb1	64	61.379	Kryptolebias_marmoratus
ENSVPAG00000001164	URB1	61	62.400	ENSLBEG00000027208	urb1	66	62.400	Labrus_bergylta
ENSVPAG00000001164	URB1	68	65.873	ENSLACG00000017059	URB1	65	65.873	Latimeria_chalumnae
ENSVPAG00000001164	URB1	66	67.123	ENSLOCG00000009190	urb1	67	67.123	Lepisosteus_oculatus
ENSVPAG00000001164	URB1	68	86.640	ENSLAFG00000010407	URB1	68	86.640	Loxodonta_africana
ENSVPAG00000001164	URB1	68	88.095	ENSMFAG00000034391	URB1	66	88.095	Macaca_fascicularis
ENSVPAG00000001164	URB1	68	87.302	ENSMMUG00000010295	URB1	68	87.302	Macaca_mulatta
ENSVPAG00000001164	URB1	68	88.095	ENSMNEG00000032981	URB1	68	88.095	Macaca_nemestrina
ENSVPAG00000001164	URB1	68	88.095	ENSMLEG00000041435	URB1	68	88.095	Mandrillus_leucophaeus
ENSVPAG00000001164	URB1	65	63.200	ENSMAMG00000011238	urb1	64	63.200	Mastacembelus_armatus
ENSVPAG00000001164	URB1	65	60.800	ENSMZEG00005011862	urb1	67	60.800	Maylandia_zebra
ENSVPAG00000001164	URB1	65	72.917	ENSMGAG00000014512	URB1	67	72.917	Meleagris_gallopavo
ENSVPAG00000001164	URB1	60	85.577	ENSMAUG00000010516	Urb1	65	85.577	Mesocricetus_auratus
ENSVPAG00000001164	URB1	68	89.683	ENSMICG00000016424	URB1	68	89.683	Microcebus_murinus
ENSVPAG00000001164	URB1	68	84.138	ENSMOCG00000012613	Urb1	68	84.138	Microtus_ochrogaster
ENSVPAG00000001164	URB1	68	80.952	ENSMODG00000021076	URB1	68	80.952	Monodelphis_domestica
ENSVPAG00000001164	URB1	61	61.806	ENSMALG00000017411	urb1	65	61.111	Monopterus_albus
ENSVPAG00000001164	URB1	68	84.921	MGP_CAROLIEiJ_G0020948	Urb1	68	84.921	Mus_caroli
ENSVPAG00000001164	URB1	68	84.921	ENSMUSG00000039929	Urb1	68	84.921	Mus_musculus
ENSVPAG00000001164	URB1	68	84.921	MGP_PahariEiJ_G0016653	Urb1	68	84.921	Mus_pahari
ENSVPAG00000001164	URB1	68	84.921	MGP_SPRETEiJ_G0021854	Urb1	68	84.921	Mus_spretus
ENSVPAG00000001164	URB1	68	92.063	ENSMPUG00000001123	URB1	68	92.063	Mustela_putorius_furo
ENSVPAG00000001164	URB1	68	84.354	ENSNGAG00000001905	Urb1	68	84.354	Nannospalax_galili
ENSVPAG00000001164	URB1	60	59.441	ENSNBRG00000001049	urb1	74	59.441	Neolamprologus_brichardi
ENSVPAG00000001164	URB1	68	88.889	ENSNLEG00000026872	URB1	68	88.889	Nomascus_leucogenys
ENSVPAG00000001164	URB1	64	75.314	ENSMEUG00000010828	URB1	64	75.314	Notamacropus_eugenii
ENSVPAG00000001164	URB1	67	87.302	ENSOPRG00000013482	URB1	68	87.302	Ochotona_princeps
ENSVPAG00000001164	URB1	68	87.075	ENSODEG00000002587	URB1	68	87.075	Octodon_degus
ENSVPAG00000001164	URB1	67	61.600	ENSONIG00000005599	urb1	67	61.600	Oreochromis_niloticus
ENSVPAG00000001164	URB1	68	89.683	ENSOCUG00000009381	URB1	68	89.683	Oryctolagus_cuniculus
ENSVPAG00000001164	URB1	70	59.722	ENSORLG00000003429	urb1	70	59.722	Oryzias_latipes
ENSVPAG00000001164	URB1	71	59.200	ENSORLG00020013785	urb1	70	59.200	Oryzias_latipes_hni
ENSVPAG00000001164	URB1	67	59.200	ENSORLG00015019421	urb1	71	59.200	Oryzias_latipes_hsok
ENSVPAG00000001164	URB1	68	90.476	ENSOGAG00000017140	URB1	68	90.476	Otolemur_garnettii
ENSVPAG00000001164	URB1	65	91.667	ENSOARG00000013679	URB1	66	91.667	Ovis_aries
ENSVPAG00000001164	URB1	68	88.889	ENSPPAG00000003423	URB1	68	88.889	Pan_paniscus
ENSVPAG00000001164	URB1	68	90.476	ENSPPRG00000023131	URB1	68	90.476	Panthera_pardus
ENSVPAG00000001164	URB1	60	90.476	ENSPTIG00000016125	URB1	63	90.476	Panthera_tigris_altaica
ENSVPAG00000001164	URB1	68	88.889	ENSPTRG00000013852	URB1	68	88.889	Pan_troglodytes
ENSVPAG00000001164	URB1	68	88.095	ENSPANG00000021964	URB1	68	88.095	Papio_anubis
ENSVPAG00000001164	URB1	67	64.423	ENSPKIG00000003683	urb1	64	64.423	Paramormyrops_kingsleyae
ENSVPAG00000001164	URB1	68	86.897	ENSPEMG00000021205	Urb1	67	86.897	Peromyscus_maniculatus_bairdii
ENSVPAG00000001164	URB1	50	53.957	ENSPMAG00000009733	URB1	59	53.957	Petromyzon_marinus
ENSVPAG00000001164	URB1	68	80.159	ENSPCIG00000016350	URB1	68	80.159	Phascolarctos_cinereus
ENSVPAG00000001164	URB1	63	64.626	ENSPLAG00000004371	urb1	63	64.626	Poecilia_latipinna
ENSVPAG00000001164	URB1	67	63.946	ENSPMEG00000006634	urb1	65	63.946	Poecilia_mexicana
ENSVPAG00000001164	URB1	67	62.162	ENSPREG00000013453	urb1	65	62.162	Poecilia_reticulata
ENSVPAG00000001164	URB1	68	88.095	ENSPPYG00000011359	URB1	68	88.095	Pongo_abelii
ENSVPAG00000001164	URB1	66	86.667	ENSPCAG00000007430	URB1	66	86.667	Procavia_capensis
ENSVPAG00000001164	URB1	68	90.476	ENSPCOG00000022695	URB1	68	90.476	Propithecus_coquereli
ENSVPAG00000001164	URB1	68	89.683	ENSPVAG00000000889	URB1	69	89.683	Pteropus_vampyrus
ENSVPAG00000001164	URB1	65	60.800	ENSPNYG00000010589	urb1	65	60.800	Pundamilia_nyererei
ENSVPAG00000001164	URB1	66	56.643	ENSPNAG00000019324	urb1	64	56.000	Pygocentrus_nattereri
ENSVPAG00000001164	URB1	68	82.540	ENSRNOG00000002080	Urb1	68	82.540	Rattus_norvegicus
ENSVPAG00000001164	URB1	68	88.889	ENSRBIG00000033122	URB1	68	88.889	Rhinopithecus_bieti
ENSVPAG00000001164	URB1	68	88.889	ENSRROG00000040237	URB1	68	88.889	Rhinopithecus_roxellana
ENSVPAG00000001164	URB1	68	86.508	ENSSBOG00000027672	URB1	68	86.508	Saimiri_boliviensis_boliviensis
ENSVPAG00000001164	URB1	68	79.365	ENSSHAG00000005140	URB1	68	79.365	Sarcophilus_harrisii
ENSVPAG00000001164	URB1	56	67.123	ENSSFOG00015000339	urb1	58	67.123	Scleropages_formosus
ENSVPAG00000001164	URB1	67	60.959	ENSSMAG00000003782	urb1	67	60.959	Scophthalmus_maximus
ENSVPAG00000001164	URB1	67	61.600	ENSSDUG00000012313	urb1	67	61.600	Seriola_dumerili
ENSVPAG00000001164	URB1	67	62.400	ENSSLDG00000023179	urb1	67	62.400	Seriola_lalandi_dorsalis
ENSVPAG00000001164	URB1	68	70.548	ENSSPUG00000012447	URB1	69	70.548	Sphenodon_punctatus
ENSVPAG00000001164	URB1	67	63.889	ENSSPAG00000006325	urb1	65	64.286	Stegastes_partitus
ENSVPAG00000001164	URB1	68	93.651	ENSSSCG00000032024	URB1	68	93.651	Sus_scrofa
ENSVPAG00000001164	URB1	51	71.528	ENSTGUG00000013442	URB1	69	71.528	Taeniopygia_guttata
ENSVPAG00000001164	URB1	70	60.000	ENSTRUG00000009372	urb1	65	60.000	Takifugu_rubripes
ENSVPAG00000001164	URB1	66	65.517	ENSTNIG00000016277	urb1	66	65.517	Tetraodon_nigroviridis
ENSVPAG00000001164	URB1	61	87.302	ENSTBEG00000010044	URB1	61	87.302	Tupaia_belangeri
ENSVPAG00000001164	URB1	57	93.478	ENSTTRG00000007712	URB1	59	93.478	Tursiops_truncatus
ENSVPAG00000001164	URB1	68	90.476	ENSUAMG00000012231	URB1	68	90.476	Ursus_americanus
ENSVPAG00000001164	URB1	61	90.476	ENSUMAG00000017419	URB1	66	90.476	Ursus_maritimus
ENSVPAG00000001164	URB1	68	91.270	ENSVVUG00000000551	URB1	69	91.270	Vulpes_vulpes
ENSVPAG00000001164	URB1	68	69.863	ENSXETG00000009895	urb1	68	69.863	Xenopus_tropicalis
ENSVPAG00000001164	URB1	65	62.500	ENSXCOG00000005500	urb1	67	62.500	Xiphophorus_couchianus
ENSVPAG00000001164	URB1	65	61.806	ENSXMAG00000007253	urb1	67	61.806	Xiphophorus_maculatus