EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000001284 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 407076 bases
Position: chrGeneScaffold_341:75816-482891
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000001183	Fox-1_C	PF12414.8	7e-41	1	1
ENSVPAP00000001183	RRM_1	PF00076.22	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000001283	RBFOX1-201	1257	-	ENSVPAP00000001183	418 (aa)	-	UPI00018BE33E

Gene Model

Click here to download ENSVPAG00000001284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000001284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000001284	RBFOX1	74	60.625	ENSVPAG00000002824	RBFOX2	80	59.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000001284	RBFOX1	81	99.351	ENSG00000078328	RBFOX1	81	99.351	Homo_sapiens
ENSVPAG00000001284	RBFOX1	74	80.583	ENSAPOG00000003197	rbfox1	72	80.583	Acanthochromis_polyacanthus
ENSVPAG00000001284	RBFOX1	64	62.290	ENSACIG00000005478	rbfox1	68	62.752	Amphilophus_citrinellus
ENSVPAG00000001284	RBFOX1	50	77.885	ENSAOCG00000008283	rbfox1	62	77.885	Amphiprion_ocellaris
ENSVPAG00000001284	RBFOX1	72	73.684	ENSAPEG00000010636	rbfox1	80	73.026	Amphiprion_percula
ENSVPAG00000001284	RBFOX1	50	78.365	ENSATEG00000007513	rbfox1	61	77.885	Anabas_testudineus
ENSVPAG00000001284	RBFOX1	74	92.857	ENSAPLG00000013263	RBFOX1	77	92.857	Anas_platyrhynchos
ENSVPAG00000001284	RBFOX1	74	85.852	ENSACAG00000004013	RBFOX1	78	85.852	Anolis_carolinensis
ENSVPAG00000001284	RBFOX1	74	99.026	ENSANAG00000029527	RBFOX1	77	99.026	Aotus_nancymaae
ENSVPAG00000001284	RBFOX1	74	99.675	ENSBTAG00000007210	RBFOX1	77	99.675	Bos_taurus
ENSVPAG00000001284	RBFOX1	81	99.351	ENSCJAG00000017351	RBFOX1	81	99.351	Callithrix_jacchus
ENSVPAG00000001284	RBFOX1	81	100.000	ENSCAFG00000019082	RBFOX1	81	100.000	Canis_familiaris
ENSVPAG00000001284	RBFOX1	51	100.000	ENSCAFG00020024881	RBFOX1	60	100.000	Canis_lupus_dingo
ENSVPAG00000001284	RBFOX1	74	99.675	ENSCHIG00000023549	RBFOX1	77	99.675	Capra_hircus
ENSVPAG00000001284	RBFOX1	74	99.351	ENSTSYG00000005334	RBFOX1	79	99.351	Carlito_syrichta
ENSVPAG00000001284	RBFOX1	81	98.701	ENSCAPG00000017669	RBFOX1	81	98.701	Cavia_aperea
ENSVPAG00000001284	RBFOX1	81	98.701	ENSCPOG00000011314	RBFOX1	81	98.701	Cavia_porcellus
ENSVPAG00000001284	RBFOX1	81	99.026	ENSCCAG00000023031	RBFOX1	81	99.026	Cebus_capucinus
ENSVPAG00000001284	RBFOX1	81	99.351	ENSCATG00000033816	RBFOX1	81	99.351	Cercocebus_atys
ENSVPAG00000001284	RBFOX1	81	99.026	ENSCLAG00000012761	RBFOX1	81	99.026	Chinchilla_lanigera
ENSVPAG00000001284	RBFOX1	58	96.694	ENSCSAG00000008739	RBFOX1	64	96.694	Chlorocebus_sabaeus
ENSVPAG00000001284	RBFOX1	81	86.207	ENSCHOG00000012843	RBFOX1	81	86.207	Choloepus_hoffmanni
ENSVPAG00000001284	RBFOX1	74	95.455	ENSCPBG00000026626	RBFOX1	77	95.455	Chrysemys_picta_bellii
ENSVPAG00000001284	RBFOX1	81	99.351	ENSCANG00000033125	RBFOX1	81	99.351	Colobus_angolensis_palliatus
ENSVPAG00000001284	RBFOX1	81	99.026	ENSCGRG00001013729	Rbfox1	81	99.026	Cricetulus_griseus_chok1gshd
ENSVPAG00000001284	RBFOX1	81	99.026	ENSCGRG00000003272	Rbfox1	81	99.026	Cricetulus_griseus_crigri
ENSVPAG00000001284	RBFOX1	74	74.277	ENSCSEG00000008840	rbfox1	76	74.277	Cynoglossus_semilaevis
ENSVPAG00000001284	RBFOX1	74	80.583	ENSDARG00000014746	rbfox1	82	79.358	Danio_rerio
ENSVPAG00000001284	RBFOX1	74	96.429	ENSDNOG00000043612	RBFOX1	74	96.429	Dasypus_novemcinctus
ENSVPAG00000001284	RBFOX1	74	95.779	ENSDORG00000010024	Rbfox1	76	95.779	Dipodomys_ordii
ENSVPAG00000001284	RBFOX1	69	93.103	ENSETEG00000003771	RBFOX1	69	93.103	Echinops_telfairi
ENSVPAG00000001284	RBFOX1	78	100.000	ENSEASG00005011599	RBFOX1	78	100.000	Equus_asinus_asinus
ENSVPAG00000001284	RBFOX1	78	100.000	ENSECAG00000012667	RBFOX1	78	100.000	Equus_caballus
ENSVPAG00000001284	RBFOX1	58	65.289	ENSELUG00000013096	rbfox1	66	64.050	Esox_lucius
ENSVPAG00000001284	RBFOX1	74	96.429	ENSFCAG00000025322	RBFOX1	70	96.429	Felis_catus
ENSVPAG00000001284	RBFOX1	58	92.975	ENSFALG00000004027	RBFOX1	72	92.975	Ficedula_albicollis
ENSVPAG00000001284	RBFOX1	81	99.026	ENSFDAG00000007388	RBFOX1	81	99.026	Fukomys_damarensis
ENSVPAG00000001284	RBFOX1	81	94.481	ENSGALG00000034325	RBFOX1	81	94.481	Gallus_gallus
ENSVPAG00000001284	RBFOX1	81	95.455	ENSGAGG00000023681	RBFOX1	81	95.455	Gopherus_agassizii
ENSVPAG00000001284	RBFOX1	81	99.351	ENSGGOG00000016871	-	81	99.351	Gorilla_gorilla
ENSVPAG00000001284	RBFOX1	81	99.026	ENSHGLG00000016944	RBFOX1	81	99.026	Heterocephalus_glaber_female
ENSVPAG00000001284	RBFOX1	81	99.026	ENSHGLG00100003272	RBFOX1	81	99.026	Heterocephalus_glaber_male
ENSVPAG00000001284	RBFOX1	64	73.626	ENSHCOG00000016419	rbfox1	69	73.626	Hippocampus_comes
ENSVPAG00000001284	RBFOX1	74	82.468	ENSIPUG00000015215	rbfox1	80	82.468	Ictalurus_punctatus
ENSVPAG00000001284	RBFOX1	81	98.377	ENSSTOG00000000322	RBFOX1	81	98.377	Ictidomys_tridecemlineatus
ENSVPAG00000001284	RBFOX1	81	99.026	ENSJJAG00000002575	Rbfox1	83	99.026	Jaculus_jaculus
ENSVPAG00000001284	RBFOX1	74	77.419	ENSLBEG00000014659	rbfox1	75	76.774	Labrus_bergylta
ENSVPAG00000001284	RBFOX1	74	83.923	ENSLOCG00000006675	rbfox1	78	83.923	Lepisosteus_oculatus
ENSVPAG00000001284	RBFOX1	74	99.351	ENSLAFG00000011480	RBFOX1	100	99.351	Loxodonta_africana
ENSVPAG00000001284	RBFOX1	81	99.351	ENSMFAG00000036447	RBFOX1	81	99.351	Macaca_fascicularis
ENSVPAG00000001284	RBFOX1	81	99.351	ENSMMUG00000003458	RBFOX1	81	99.351	Macaca_mulatta
ENSVPAG00000001284	RBFOX1	81	99.351	ENSMNEG00000032034	RBFOX1	81	99.351	Macaca_nemestrina
ENSVPAG00000001284	RBFOX1	81	99.351	ENSMLEG00000015382	RBFOX1	81	99.351	Mandrillus_leucophaeus
ENSVPAG00000001284	RBFOX1	74	78.317	ENSMAMG00000003142	rbfox1	77	78.317	Mastacembelus_armatus
ENSVPAG00000001284	RBFOX1	71	49.835	ENSMAUG00000020570	Rbfox1	77	49.505	Mesocricetus_auratus
ENSVPAG00000001284	RBFOX1	65	100.000	ENSMICG00000034286	RBFOX1	69	100.000	Microcebus_murinus
ENSVPAG00000001284	RBFOX1	81	98.701	ENSMOCG00000020932	Rbfox1	81	98.701	Microtus_ochrogaster
ENSVPAG00000001284	RBFOX1	64	73.978	ENSMMOG00000009716	rbfox1	66	73.234	Mola_mola
ENSVPAG00000001284	RBFOX1	58	94.628	ENSMODG00000005826	RBFOX1	68	94.628	Monodelphis_domestica
ENSVPAG00000001284	RBFOX1	74	79.288	ENSMALG00000003337	rbfox1	73	79.288	Monopterus_albus
ENSVPAG00000001284	RBFOX1	81	99.026	MGP_CAROLIEiJ_G0020427	Rbfox1	81	99.026	Mus_caroli
ENSVPAG00000001284	RBFOX1	81	98.701	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSVPAG00000001284	RBFOX1	81	99.026	MGP_PahariEiJ_G0016135	Rbfox1	81	99.026	Mus_pahari
ENSVPAG00000001284	RBFOX1	81	98.377	MGP_SPRETEiJ_G0021321	Rbfox1	81	98.377	Mus_spretus
ENSVPAG00000001284	RBFOX1	66	100.000	ENSMPUG00000014822	RBFOX1	70	100.000	Mustela_putorius_furo
ENSVPAG00000001284	RBFOX1	74	97.078	ENSMLUG00000015896	RBFOX1	100	97.078	Myotis_lucifugus
ENSVPAG00000001284	RBFOX1	81	98.701	ENSNGAG00000023276	Rbfox1	81	98.701	Nannospalax_galili
ENSVPAG00000001284	RBFOX1	74	65.714	ENSNBRG00000011084	rbfox1	71	66.667	Neolamprologus_brichardi
ENSVPAG00000001284	RBFOX1	81	99.026	ENSNLEG00000010017	-	81	99.026	Nomascus_leucogenys
ENSVPAG00000001284	RBFOX1	80	89.286	ENSMEUG00000012525	RBFOX1	81	89.286	Notamacropus_eugenii
ENSVPAG00000001284	RBFOX1	81	89.655	ENSOPRG00000006199	-	81	89.655	Ochotona_princeps
ENSVPAG00000001284	RBFOX1	81	99.026	ENSODEG00000013166	RBFOX1	81	99.026	Octodon_degus
ENSVPAG00000001284	RBFOX1	58	93.388	ENSOANG00000002379	RBFOX1	64	93.388	Ornithorhynchus_anatinus
ENSVPAG00000001284	RBFOX1	74	96.753	ENSOGAG00000025535	RBFOX1	77	96.753	Otolemur_garnettii
ENSVPAG00000001284	RBFOX1	74	96.753	ENSPPAG00000036238	-	79	96.753	Pan_paniscus
ENSVPAG00000001284	RBFOX1	81	100.000	ENSPPRG00000006546	RBFOX1	81	100.000	Panthera_pardus
ENSVPAG00000001284	RBFOX1	73	83.333	ENSPTIG00000021154	RBFOX1	77	82.085	Panthera_tigris_altaica
ENSVPAG00000001284	RBFOX1	81	99.351	ENSPTRG00000007744	RBFOX1	81	99.351	Pan_troglodytes
ENSVPAG00000001284	RBFOX1	81	99.351	ENSPANG00000026500	RBFOX1	81	99.351	Papio_anubis
ENSVPAG00000001284	RBFOX1	74	81.169	ENSPKIG00000009667	-	75	80.135	Paramormyrops_kingsleyae
ENSVPAG00000001284	RBFOX1	50	83.254	ENSPKIG00000019353	rbfox1	59	83.254	Paramormyrops_kingsleyae
ENSVPAG00000001284	RBFOX1	74	93.182	ENSPSIG00000006523	RBFOX1	77	93.182	Pelodiscus_sinensis
ENSVPAG00000001284	RBFOX1	81	99.026	ENSPEMG00000017607	Rbfox1	81	99.026	Peromyscus_maniculatus_bairdii
ENSVPAG00000001284	RBFOX1	70	91.468	ENSPCIG00000026887	RBFOX1	100	91.468	Phascolarctos_cinereus
ENSVPAG00000001284	RBFOX1	65	96.694	ENSPPYG00000007079	-	69	96.694	Pongo_abelii
ENSVPAG00000001284	RBFOX1	71	98.507	ENSPCAG00000002630	RBFOX1	79	98.507	Procavia_capensis
ENSVPAG00000001284	RBFOX1	81	99.351	ENSPCOG00000025687	RBFOX1	81	99.351	Propithecus_coquereli
ENSVPAG00000001284	RBFOX1	81	96.552	ENSPVAG00000013467	RBFOX1	81	96.552	Pteropus_vampyrus
ENSVPAG00000001284	RBFOX1	74	83.117	ENSPNAG00000023109	rbfox1	76	83.117	Pygocentrus_nattereri
ENSVPAG00000001284	RBFOX1	81	96.104	ENSRNOG00000002827	Rbfox1	81	96.104	Rattus_norvegicus
ENSVPAG00000001284	RBFOX1	74	96.753	ENSRBIG00000044478	RBFOX1	79	96.753	Rhinopithecus_bieti
ENSVPAG00000001284	RBFOX1	81	99.351	ENSRROG00000044411	RBFOX1	81	99.351	Rhinopithecus_roxellana
ENSVPAG00000001284	RBFOX1	74	96.429	ENSSBOG00000033726	RBFOX1	77	96.429	Saimiri_boliviensis_boliviensis
ENSVPAG00000001284	RBFOX1	74	90.909	ENSSHAG00000009257	RBFOX1	77	90.909	Sarcophilus_harrisii
ENSVPAG00000001284	RBFOX1	64	78.731	ENSSFOG00015009955	-	61	78.731	Scleropages_formosus
ENSVPAG00000001284	RBFOX1	74	62.500	ENSSFOG00015023675	rbfox1	65	95.588	Scleropages_formosus
ENSVPAG00000001284	RBFOX1	74	79.355	ENSSMAG00000015505	rbfox1	69	79.355	Scophthalmus_maximus
ENSVPAG00000001284	RBFOX1	74	77.670	ENSSDUG00000016413	rbfox1	75	77.023	Seriola_dumerili
ENSVPAG00000001284	RBFOX1	64	74.721	ENSSLDG00000009353	rbfox1	67	73.978	Seriola_lalandi_dorsalis
ENSVPAG00000001284	RBFOX1	64	80.970	ENSSPUG00000009732	RBFOX1	66	80.970	Sphenodon_punctatus
ENSVPAG00000001284	RBFOX1	74	79.612	ENSSPAG00000009723	rbfox1	74	79.612	Stegastes_partitus
ENSVPAG00000001284	RBFOX1	78	100.000	ENSSSCG00000007917	RBFOX1	78	100.000	Sus_scrofa
ENSVPAG00000001284	RBFOX1	74	93.182	ENSTGUG00000004562	RBFOX1	79	93.182	Taeniopygia_guttata
ENSVPAG00000001284	RBFOX1	74	79.677	ENSTRUG00000020940	rbfox1	74	78.964	Takifugu_rubripes
ENSVPAG00000001284	RBFOX1	64	54.603	ENSTNIG00000002567	rbfox1	100	56.190	Tetraodon_nigroviridis
ENSVPAG00000001284	RBFOX1	81	89.655	ENSTBEG00000009169	-	81	89.655	Tupaia_belangeri
ENSVPAG00000001284	RBFOX1	81	100.000	ENSTTRG00000005700	RBFOX1	81	100.000	Tursiops_truncatus
ENSVPAG00000001284	RBFOX1	74	93.506	ENSUAMG00000024633	RBFOX1	77	93.506	Ursus_americanus
ENSVPAG00000001284	RBFOX1	66	100.000	ENSUMAG00000003579	RBFOX1	76	82.143	Ursus_maritimus
ENSVPAG00000001284	RBFOX1	74	96.429	ENSVVUG00000017311	RBFOX1	70	96.429	Vulpes_vulpes