EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000001374 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 139220 bases
Position: chrGeneScaffold_2958:348910-488129
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000001271	ResIII	PF04851.15	8.4e-07	1	1
ENSVPAP00000001271	BRK	PF07533.16	4e-31	1	2
ENSVPAP00000001271	BRK	PF07533.16	4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000001375	CHD9-201	8592	-	ENSVPAP00000001271	2863 (aa)	-	UPI00018BDE27

Gene Model

Click here to download ENSVPAG00000001374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000001374's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000001374	CHD9	53	63.600	ENSVPAG00000007941	CHD6	61	73.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000001374	CHD9	97	95.199	ENSG00000177200	CHD9	100	98.113	Homo_sapiens
ENSVPAG00000001374	CHD9	82	70.260	ENSAPOG00000023034	chd9	97	67.827	Acanthochromis_polyacanthus
ENSVPAG00000001374	CHD9	97	96.466	ENSAMEG00000016232	CHD9	97	96.466	Ailuropoda_melanoleuca
ENSVPAG00000001374	CHD9	52	73.176	ENSACIG00000004097	chd9	70	73.308	Amphilophus_citrinellus
ENSVPAG00000001374	CHD9	81	69.918	ENSAOCG00000005487	chd9	71	75.909	Amphiprion_ocellaris
ENSVPAG00000001374	CHD9	81	69.772	ENSAPEG00000009859	chd9	71	75.833	Amphiprion_percula
ENSVPAG00000001374	CHD9	77	69.797	ENSATEG00000002748	chd9	97	68.186	Anabas_testudineus
ENSVPAG00000001374	CHD9	97	85.693	ENSAPLG00000002826	CHD9	50	82.275	Anas_platyrhynchos
ENSVPAG00000001374	CHD9	97	82.853	ENSACAG00000016150	CHD9	95	83.211	Anolis_carolinensis
ENSVPAG00000001374	CHD9	97	95.007	ENSANAG00000015630	CHD9	98	96.337	Aotus_nancymaae
ENSVPAG00000001374	CHD9	76	69.921	ENSACLG00000016899	chd9	70	75.836	Astatotilapia_calliptera
ENSVPAG00000001374	CHD9	92	66.921	ENSAMXG00000005652	chd9	72	75.475	Astyanax_mexicanus
ENSVPAG00000001374	CHD9	97	96.728	ENSBTAG00000002287	CHD9	97	96.728	Bos_taurus
ENSVPAG00000001374	CHD9	97	94.634	ENSCJAG00000001573	CHD9	98	96.703	Callithrix_jacchus
ENSVPAG00000001374	CHD9	97	96.268	ENSCAFG00000009699	CHD9	97	96.268	Canis_familiaris
ENSVPAG00000001374	CHD9	97	96.268	ENSCAFG00020002879	CHD9	100	98.535	Canis_lupus_dingo
ENSVPAG00000001374	CHD9	51	94.372	ENSCHIG00000021000	CHD9	50	94.372	Capra_hircus
ENSVPAG00000001374	CHD9	97	95.296	ENSTSYG00000007693	CHD9	98	97.436	Carlito_syrichta
ENSVPAG00000001374	CHD9	78	84.935	ENSCAPG00000011604	CHD9	79	84.935	Cavia_aperea
ENSVPAG00000001374	CHD9	97	93.464	ENSCPOG00000036544	CHD9	97	93.464	Cavia_porcellus
ENSVPAG00000001374	CHD9	97	94.372	ENSCCAG00000036178	CHD9	98	95.971	Cebus_capucinus
ENSVPAG00000001374	CHD9	97	93.992	ENSCATG00000036753	CHD9	98	96.703	Cercocebus_atys
ENSVPAG00000001374	CHD9	97	94.466	ENSCLAG00000007137	CHD9	97	94.368	Chinchilla_lanigera
ENSVPAG00000001374	CHD9	97	95.012	ENSCSAG00000005311	CHD9	97	95.012	Chlorocebus_sabaeus
ENSVPAG00000001374	CHD9	71	98.077	ENSCHOG00000003935	CHD9	73	98.077	Choloepus_hoffmanni
ENSVPAG00000001374	CHD9	97	86.820	ENSCPBG00000012459	CHD9	96	89.694	Chrysemys_picta_bellii
ENSVPAG00000001374	CHD9	97	95.058	ENSCANG00000030349	CHD9	98	96.703	Colobus_angolensis_palliatus
ENSVPAG00000001374	CHD9	97	91.078	ENSCGRG00001016150	Chd9	97	90.597	Cricetulus_griseus_chok1gshd
ENSVPAG00000001374	CHD9	97	91.078	ENSCGRG00000012850	Chd9	90	98.826	Cricetulus_griseus_crigri
ENSVPAG00000001374	CHD9	77	68.644	ENSCSEG00000009209	chd9	69	73.890	Cynoglossus_semilaevis
ENSVPAG00000001374	CHD9	82	69.789	ENSCVAG00000016195	chd9	70	75.833	Cyprinodon_variegatus
ENSVPAG00000001374	CHD9	52	75.115	ENSDARG00000074498	chd9	65	74.773	Danio_rerio
ENSVPAG00000001374	CHD9	78	93.892	ENSDNOG00000006045	CHD9	96	93.882	Dasypus_novemcinctus
ENSVPAG00000001374	CHD9	69	91.324	ENSDORG00000008523	-	99	90.836	Dipodomys_ordii
ENSVPAG00000001374	CHD9	90	97.895	ENSETEG00000009565	CHD9	89	97.895	Echinops_telfairi
ENSVPAG00000001374	CHD9	97	95.681	ENSEASG00005014832	CHD9	97	95.681	Equus_asinus_asinus
ENSVPAG00000001374	CHD9	97	97.336	ENSECAG00000011505	CHD9	97	97.336	Equus_caballus
ENSVPAG00000001374	CHD9	82	97.790	ENSEEUG00000014515	CHD9	84	97.790	Erinaceus_europaeus
ENSVPAG00000001374	CHD9	72	77.254	ENSELUG00000006031	chd9	95	66.760	Esox_lucius
ENSVPAG00000001374	CHD9	97	95.926	ENSFCAG00000022534	CHD9	98	98.168	Felis_catus
ENSVPAG00000001374	CHD9	80	86.190	ENSFALG00000013276	CHD9	96	86.644	Ficedula_albicollis
ENSVPAG00000001374	CHD9	97	94.665	ENSFDAG00000021037	CHD9	97	94.665	Fukomys_damarensis
ENSVPAG00000001374	CHD9	82	69.043	ENSFHEG00000006068	chd9	71	75.661	Fundulus_heteroclitus
ENSVPAG00000001374	CHD9	64	77.487	ENSGMOG00000006040	chd9	80	77.487	Gadus_morhua
ENSVPAG00000001374	CHD9	93	87.229	ENSGALG00000039178	CHD9	95	87.746	Gallus_gallus
ENSVPAG00000001374	CHD9	81	69.182	ENSGAFG00000010014	chd9	64	75.661	Gambusia_affinis
ENSVPAG00000001374	CHD9	76	66.911	ENSGACG00000016694	chd9	93	74.676	Gasterosteus_aculeatus
ENSVPAG00000001374	CHD9	97	95.007	ENSGGOG00000014816	CHD9	98	97.070	Gorilla_gorilla
ENSVPAG00000001374	CHD9	76	69.941	ENSHBUG00000023322	chd9	96	70.629	Haplochromis_burtoni
ENSVPAG00000001374	CHD9	97	93.598	ENSHGLG00000014938	CHD9	97	93.634	Heterocephalus_glaber_female
ENSVPAG00000001374	CHD9	89	67.148	ENSHCOG00000000937	chd9	65	75.608	Hippocampus_comes
ENSVPAG00000001374	CHD9	79	68.269	ENSIPUG00000016448	chd9	98	73.723	Ictalurus_punctatus
ENSVPAG00000001374	CHD9	97	93.453	ENSSTOG00000022273	CHD9	97	92.932	Ictidomys_tridecemlineatus
ENSVPAG00000001374	CHD9	69	91.952	ENSJJAG00000015741	-	99	91.872	Jaculus_jaculus
ENSVPAG00000001374	CHD9	81	69.672	ENSKMAG00000016784	chd9	72	76.100	Kryptolebias_marmoratus
ENSVPAG00000001374	CHD9	77	68.729	ENSLBEG00000012077	chd9	96	67.683	Labrus_bergylta
ENSVPAG00000001374	CHD9	97	75.763	ENSLACG00000005557	CHD9	71	78.834	Latimeria_chalumnae
ENSVPAG00000001374	CHD9	85	72.159	ENSLOCG00000007225	chd9	65	81.308	Lepisosteus_oculatus
ENSVPAG00000001374	CHD9	97	94.038	ENSLAFG00000015374	CHD9	97	94.028	Loxodonta_africana
ENSVPAG00000001374	CHD9	97	95.010	ENSMFAG00000041354	CHD9	98	96.703	Macaca_fascicularis
ENSVPAG00000001374	CHD9	97	95.010	ENSMMUG00000016310	CHD9	98	96.703	Macaca_mulatta
ENSVPAG00000001374	CHD9	97	94.915	ENSMNEG00000031494	CHD9	97	94.932	Macaca_nemestrina
ENSVPAG00000001374	CHD9	97	95.010	ENSMLEG00000043219	CHD9	98	96.703	Mandrillus_leucophaeus
ENSVPAG00000001374	CHD9	76	69.572	ENSMAMG00000003909	chd9	95	69.011	Mastacembelus_armatus
ENSVPAG00000001374	CHD9	81	69.883	ENSMZEG00005006581	chd9	70	75.833	Maylandia_zebra
ENSVPAG00000001374	CHD9	92	81.396	ENSMGAG00000004642	CHD9	69	84.247	Meleagris_gallopavo
ENSVPAG00000001374	CHD9	97	94.908	ENSMICG00000016679	CHD9	98	96.703	Microcebus_murinus
ENSVPAG00000001374	CHD9	70	78.686	ENSMODG00000013142	-	95	89.486	Monodelphis_domestica
ENSVPAG00000001374	CHD9	81	68.606	ENSMALG00000013306	chd9	71	74.238	Monopterus_albus
ENSVPAG00000001374	CHD9	97	90.695	MGP_CAROLIEiJ_G0031364	Chd9	97	90.264	Mus_caroli
ENSVPAG00000001374	CHD9	97	90.343	ENSMUSG00000056608	Chd9	90	98.826	Mus_musculus
ENSVPAG00000001374	CHD9	97	88.411	MGP_PahariEiJ_G0022964	Chd9	97	87.982	Mus_pahari
ENSVPAG00000001374	CHD9	97	90.539	MGP_SPRETEiJ_G0032483	Chd9	97	90.010	Mus_spretus
ENSVPAG00000001374	CHD9	97	96.204	ENSMPUG00000003285	CHD9	97	96.204	Mustela_putorius_furo
ENSVPAG00000001374	CHD9	97	94.372	ENSMLUG00000004456	CHD9	97	94.372	Myotis_lucifugus
ENSVPAG00000001374	CHD9	81	69.527	ENSNBRG00000009423	chd9	71	75.833	Neolamprologus_brichardi
ENSVPAG00000001374	CHD9	87	95.141	ENSNLEG00000001026	CHD9	97	95.141	Nomascus_leucogenys
ENSVPAG00000001374	CHD9	71	98.496	ENSMEUG00000008222	-	80	93.333	Notamacropus_eugenii
ENSVPAG00000001374	CHD9	85	92.593	ENSOPRG00000011168	CHD9	85	92.593	Ochotona_princeps
ENSVPAG00000001374	CHD9	97	93.634	ENSODEG00000004466	CHD9	97	93.346	Octodon_degus
ENSVPAG00000001374	CHD9	77	70.923	ENSONIG00000002816	chd9	84	76.100	Oreochromis_niloticus
ENSVPAG00000001374	CHD9	97	88.517	ENSOANG00000013401	CHD9	97	89.090	Ornithorhynchus_anatinus
ENSVPAG00000001374	CHD9	80	95.395	ENSOCUG00000001016	CHD9	96	95.395	Oryctolagus_cuniculus
ENSVPAG00000001374	CHD9	81	69.268	ENSORLG00000013810	chd9	70	76.000	Oryzias_latipes
ENSVPAG00000001374	CHD9	82	69.692	ENSORLG00020020665	chd9	72	76.829	Oryzias_latipes_hni
ENSVPAG00000001374	CHD9	82	69.328	ENSORLG00015019126	chd9	94	69.473	Oryzias_latipes_hsok
ENSVPAG00000001374	CHD9	97	95.005	ENSOGAG00000002110	CHD9	97	95.005	Otolemur_garnettii
ENSVPAG00000001374	CHD9	97	96.466	ENSOARG00000017664	CHD9	97	96.466	Ovis_aries
ENSVPAG00000001374	CHD9	80	94.956	ENSPPAG00000039388	-	97	94.956	Pan_paniscus
ENSVPAG00000001374	CHD9	97	95.781	ENSPPRG00000004801	CHD9	98	97.802	Panthera_pardus
ENSVPAG00000001374	CHD9	97	95.026	ENSPTIG00000021854	CHD9	98	95.697	Panthera_tigris_altaica
ENSVPAG00000001374	CHD9	97	95.247	ENSPTRG00000008113	CHD9	98	97.070	Pan_troglodytes
ENSVPAG00000001374	CHD9	97	95.010	ENSPANG00000019307	CHD9	98	96.703	Papio_anubis
ENSVPAG00000001374	CHD9	94	70.179	ENSPKIG00000021876	chd9	73	77.437	Paramormyrops_kingsleyae
ENSVPAG00000001374	CHD9	96	67.532	ENSPKIG00000025401	-	69	79.167	Paramormyrops_kingsleyae
ENSVPAG00000001374	CHD9	61	88.801	ENSPSIG00000008099	CHD9	95	88.801	Pelodiscus_sinensis
ENSVPAG00000001374	CHD9	59	55.117	ENSPMAG00000006035	-	72	65.245	Petromyzon_marinus
ENSVPAG00000001374	CHD9	86	88.422	ENSPCIG00000017215	CHD9	97	89.491	Phascolarctos_cinereus
ENSVPAG00000001374	CHD9	81	69.197	ENSPFOG00000015839	chd9	67	75.510	Poecilia_formosa
ENSVPAG00000001374	CHD9	81	69.294	ENSPLAG00000011118	chd9	71	75.586	Poecilia_latipinna
ENSVPAG00000001374	CHD9	81	70.268	ENSPMEG00000015106	chd9	67	76.046	Poecilia_mexicana
ENSVPAG00000001374	CHD9	81	70.431	ENSPREG00000006473	chd9	97	67.854	Poecilia_reticulata
ENSVPAG00000001374	CHD9	97	95.053	ENSPPYG00000007348	CHD9	97	95.053	Pongo_abelii
ENSVPAG00000001374	CHD9	74	95.518	ENSPCAG00000007564	CHD9	83	95.518	Procavia_capensis
ENSVPAG00000001374	CHD9	97	94.764	ENSPCOG00000028433	CHD9	98	97.802	Propithecus_coquereli
ENSVPAG00000001374	CHD9	94	95.096	ENSPVAG00000015617	CHD9	94	95.010	Pteropus_vampyrus
ENSVPAG00000001374	CHD9	81	69.878	ENSPNYG00000010947	chd9	71	75.988	Pundamilia_nyererei
ENSVPAG00000001374	CHD9	83	70.842	ENSPNAG00000024141	chd9	71	77.096	Pygocentrus_nattereri
ENSVPAG00000001374	CHD9	87	87.437	ENSRNOG00000049302	Chd9	95	93.197	Rattus_norvegicus
ENSVPAG00000001374	CHD9	80	95.324	ENSRBIG00000035553	CHD9	98	96.703	Rhinopithecus_bieti
ENSVPAG00000001374	CHD9	80	95.294	ENSRROG00000033278	CHD9	98	96.703	Rhinopithecus_roxellana
ENSVPAG00000001374	CHD9	97	94.862	ENSSBOG00000030240	CHD9	98	95.971	Saimiri_boliviensis_boliviensis
ENSVPAG00000001374	CHD9	97	88.802	ENSSHAG00000002719	CHD9	97	88.802	Sarcophilus_harrisii
ENSVPAG00000001374	CHD9	82	69.476	ENSSFOG00015001327	chd9	71	76.556	Scleropages_formosus
ENSVPAG00000001374	CHD9	95	71.089	ENSSFOG00015020209	chd9	97	69.394	Scleropages_formosus
ENSVPAG00000001374	CHD9	81	68.584	ENSSMAG00000008953	chd9	95	79.475	Scophthalmus_maximus
ENSVPAG00000001374	CHD9	81	69.107	ENSSDUG00000006139	chd9	97	67.543	Seriola_dumerili
ENSVPAG00000001374	CHD9	81	69.673	ENSSLDG00000017818	chd9	97	68.090	Seriola_lalandi_dorsalis
ENSVPAG00000001374	CHD9	95	95.000	ENSSARG00000010632	CHD9	95	95.000	Sorex_araneus
ENSVPAG00000001374	CHD9	81	69.067	ENSSPAG00000021649	chd9	71	75.322	Stegastes_partitus
ENSVPAG00000001374	CHD9	97	96.466	ENSSSCG00000033591	CHD9	72	96.466	Sus_scrofa
ENSVPAG00000001374	CHD9	87	88.099	ENSTGUG00000007476	CHD9	97	88.494	Taeniopygia_guttata
ENSVPAG00000001374	CHD9	57	75.649	ENSTRUG00000009125	chd9	71	75.573	Takifugu_rubripes
ENSVPAG00000001374	CHD9	63	60.606	ENSTNIG00000003825	chd9	92	60.606	Tetraodon_nigroviridis
ENSVPAG00000001374	CHD9	67	89.753	ENSTBEG00000016052	-	82	89.753	Tupaia_belangeri
ENSVPAG00000001374	CHD9	87	97.251	ENSTTRG00000012674	CHD9	87	97.251	Tursiops_truncatus
ENSVPAG00000001374	CHD9	64	95.218	ENSUAMG00000022706	CHD9	98	98.535	Ursus_americanus
ENSVPAG00000001374	CHD9	87	96.335	ENSUMAG00000004043	CHD9	96	96.335	Ursus_maritimus
ENSVPAG00000001374	CHD9	97	96.316	ENSVVUG00000019435	CHD9	97	96.316	Vulpes_vulpes
ENSVPAG00000001374	CHD9	97	76.600	ENSXETG00000000349	chd9	93	83.631	Xenopus_tropicalis
ENSVPAG00000001374	CHD9	77	70.270	ENSXCOG00000012997	chd9	64	76.024	Xiphophorus_couchianus
ENSVPAG00000001374	CHD9	81	69.844	ENSXMAG00000016192	chd9	71	75.813	Xiphophorus_maculatus