EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000001781 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 6709 bases
Position: chrGeneScaffold_51:385952-392660
Accession: 20495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000001644	RRM_1	PF00076.22	2.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000001781	SLIRP-201	327	-	ENSVPAP00000001644	108 (aa)	-	UPI00018BDA2F

Gene Model

Click here to download ENSVPAG00000001781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000001781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000001781	SLIRP	87	70.526	ENSG00000119705	SLIRP	97	74.324	Homo_sapiens
ENSVPAG00000001781	SLIRP	81	50.000	ENSAPOG00000001298	slirp	88	50.000	Acanthochromis_polyacanthus
ENSVPAG00000001781	SLIRP	84	80.220	ENSAMEG00000003975	SLIRP	100	80.220	Ailuropoda_melanoleuca
ENSVPAG00000001781	SLIRP	81	50.575	ENSACIG00000023083	slirp	85	50.575	Amphilophus_citrinellus
ENSVPAG00000001781	SLIRP	81	52.809	ENSAOCG00000006342	slirp	90	52.809	Amphiprion_ocellaris
ENSVPAG00000001781	SLIRP	81	52.809	ENSAPEG00000015917	slirp	90	52.809	Amphiprion_percula
ENSVPAG00000001781	SLIRP	81	52.809	ENSAPEG00000015719	-	91	52.809	Amphiprion_percula
ENSVPAG00000001781	SLIRP	72	52.564	ENSATEG00000013525	slirp	77	52.564	Anabas_testudineus
ENSVPAG00000001781	SLIRP	80	50.575	ENSAMXG00000018693	slirp	87	50.575	Astyanax_mexicanus
ENSVPAG00000001781	SLIRP	100	75.926	ENSCJAG00000016946	SLIRP	100	75.926	Callithrix_jacchus
ENSVPAG00000001781	SLIRP	100	74.775	ENSCAFG00020015876	-	100	74.775	Canis_lupus_dingo
ENSVPAG00000001781	SLIRP	100	78.704	ENSCCAG00000030130	SLIRP	100	78.704	Cebus_capucinus
ENSVPAG00000001781	SLIRP	100	71.560	ENSCATG00000036327	SLIRP	100	71.560	Cercocebus_atys
ENSVPAG00000001781	SLIRP	90	73.469	ENSCSAG00000011736	SLIRP	100	73.394	Chlorocebus_sabaeus
ENSVPAG00000001781	SLIRP	65	51.429	ENSCPBG00000026327	SLIRP	71	51.429	Chrysemys_picta_bellii
ENSVPAG00000001781	SLIRP	69	78.378	ENSCANG00000032892	SLIRP	90	76.136	Colobus_angolensis_palliatus
ENSVPAG00000001781	SLIRP	100	69.369	ENSCGRG00001024068	Slirp	100	69.369	Cricetulus_griseus_chok1gshd
ENSVPAG00000001781	SLIRP	100	69.369	ENSCGRG00000017440	Slirp	100	69.369	Cricetulus_griseus_crigri
ENSVPAG00000001781	SLIRP	66	56.338	ENSCSEG00000015766	slirp	72	56.338	Cynoglossus_semilaevis
ENSVPAG00000001781	SLIRP	65	52.857	ENSCVAG00000012504	slirp	69	52.857	Cyprinodon_variegatus
ENSVPAG00000001781	SLIRP	70	51.948	ENSDARG00000097753	slirp	74	52.632	Danio_rerio
ENSVPAG00000001781	SLIRP	81	72.222	ENSDNOG00000007721	SLIRP	100	67.273	Dasypus_novemcinctus
ENSVPAG00000001781	SLIRP	100	75.676	ENSDORG00000012379	Slirp	100	75.676	Dipodomys_ordii
ENSVPAG00000001781	SLIRP	90	71.134	ENSETEG00000010345	SLIRP	100	70.370	Echinops_telfairi
ENSVPAG00000001781	SLIRP	100	80.180	ENSEASG00005020193	SLIRP	100	80.180	Equus_asinus_asinus
ENSVPAG00000001781	SLIRP	92	61.386	ENSEEUG00000007257	SLIRP	100	61.386	Erinaceus_europaeus
ENSVPAG00000001781	SLIRP	72	52.564	ENSELUG00000016800	slirp	76	52.564	Esox_lucius
ENSVPAG00000001781	SLIRP	81	85.227	ENSFCAG00000036326	SLIRP	90	85.227	Felis_catus
ENSVPAG00000001781	SLIRP	66	50.704	ENSFALG00000012583	SLIRP	84	47.253	Ficedula_albicollis
ENSVPAG00000001781	SLIRP	97	69.027	ENSFDAG00000008347	SLIRP	100	69.027	Fukomys_damarensis
ENSVPAG00000001781	SLIRP	69	54.054	ENSFHEG00000004709	slirp	79	54.054	Fundulus_heteroclitus
ENSVPAG00000001781	SLIRP	81	49.425	ENSGMOG00000016948	slirp	83	49.425	Gadus_morhua
ENSVPAG00000001781	SLIRP	72	47.436	ENSGALG00000031238	SLIRP	79	47.436	Gallus_gallus
ENSVPAG00000001781	SLIRP	81	51.685	ENSGAFG00000010998	slirp	89	51.685	Gambusia_affinis
ENSVPAG00000001781	SLIRP	67	51.389	ENSGACG00000020137	slirp	84	51.389	Gasterosteus_aculeatus
ENSVPAG00000001781	SLIRP	74	55.000	ENSGAGG00000009953	SLIRP	55	55.000	Gopherus_agassizii
ENSVPAG00000001781	SLIRP	87	70.526	ENSGGOG00000011059	-	100	70.642	Gorilla_gorilla
ENSVPAG00000001781	SLIRP	100	69.369	ENSHGLG00000018491	SLIRP	100	69.369	Heterocephalus_glaber_female
ENSVPAG00000001781	SLIRP	100	69.369	ENSHGLG00100014153	SLIRP	100	69.369	Heterocephalus_glaber_male
ENSVPAG00000001781	SLIRP	81	51.724	ENSHCOG00000006795	slirp	87	51.724	Hippocampus_comes
ENSVPAG00000001781	SLIRP	80	47.126	ENSIPUG00000010214	SLIRP	87	47.126	Ictalurus_punctatus
ENSVPAG00000001781	SLIRP	90	75.000	ENSSTOG00000034316	SLIRP	100	74.775	Ictidomys_tridecemlineatus
ENSVPAG00000001781	SLIRP	81	45.977	ENSKMAG00000002038	slirp	83	45.977	Kryptolebias_marmoratus
ENSVPAG00000001781	SLIRP	80	53.488	ENSLBEG00000007564	slirp	85	53.488	Labrus_bergylta
ENSVPAG00000001781	SLIRP	81	48.352	ENSLACG00000013434	SLIRP	87	48.352	Latimeria_chalumnae
ENSVPAG00000001781	SLIRP	90	72.449	ENSMFAG00000042960	SLIRP	100	73.394	Macaca_fascicularis
ENSVPAG00000001781	SLIRP	90	72.449	ENSMMUG00000029256	SLIRP	100	72.477	Macaca_mulatta
ENSVPAG00000001781	SLIRP	90	72.449	ENSMNEG00000028921	SLIRP	100	73.394	Macaca_nemestrina
ENSVPAG00000001781	SLIRP	81	76.136	ENSMLEG00000043644	SLIRP	90	76.136	Mandrillus_leucophaeus
ENSVPAG00000001781	SLIRP	81	52.273	ENSMZEG00005004617	slirp	89	52.273	Maylandia_zebra
ENSVPAG00000001781	SLIRP	100	73.874	ENSMAUG00000003857	Slirp	100	73.874	Mesocricetus_auratus
ENSVPAG00000001781	SLIRP	100	65.766	ENSMICG00000012080	SLIRP	100	65.766	Microcebus_murinus
ENSVPAG00000001781	SLIRP	98	76.147	ENSMOCG00000016019	Slirp	97	76.147	Microtus_ochrogaster
ENSVPAG00000001781	SLIRP	81	51.724	ENSMMOG00000018268	slirp	86	51.724	Mola_mola
ENSVPAG00000001781	SLIRP	65	64.286	ENSMODG00000005207	-	99	64.286	Monodelphis_domestica
ENSVPAG00000001781	SLIRP	81	47.727	ENSMALG00000012581	slirp	90	47.727	Monopterus_albus
ENSVPAG00000001781	SLIRP	97	71.296	MGP_CAROLIEiJ_G0017995	Slirp	100	71.296	Mus_caroli
ENSVPAG00000001781	SLIRP	98	71.560	ENSMUSG00000021040	Slirp	97	71.560	Mus_musculus
ENSVPAG00000001781	SLIRP	98	71.560	MGP_SPRETEiJ_G0018840	Slirp	97	71.560	Mus_spretus
ENSVPAG00000001781	SLIRP	85	78.947	ENSMLUG00000024998	-	100	76.577	Myotis_lucifugus
ENSVPAG00000001781	SLIRP	90	76.000	ENSMLUG00000029544	-	100	74.775	Myotis_lucifugus
ENSVPAG00000001781	SLIRP	97	70.370	ENSNGAG00000016363	Slirp	100	70.370	Nannospalax_galili
ENSVPAG00000001781	SLIRP	93	68.317	ENSNLEG00000027238	-	97	68.317	Nomascus_leucogenys
ENSVPAG00000001781	SLIRP	100	68.807	ENSNLEG00000032459	-	100	68.807	Nomascus_leucogenys
ENSVPAG00000001781	SLIRP	98	72.477	ENSODEG00000012580	SLIRP	99	75.824	Octodon_degus
ENSVPAG00000001781	SLIRP	80	54.651	ENSONIG00000011692	slirp	86	54.651	Oreochromis_niloticus
ENSVPAG00000001781	SLIRP	98	56.604	ENSOANG00000022366	SLIRP	86	56.604	Ornithorhynchus_anatinus
ENSVPAG00000001781	SLIRP	81	52.273	ENSORLG00000010761	slirp	68	52.273	Oryzias_latipes
ENSVPAG00000001781	SLIRP	81	53.409	ENSORLG00020022188	slirp	88	53.409	Oryzias_latipes_hni
ENSVPAG00000001781	SLIRP	99	47.664	ENSORLG00015020171	slirp	96	47.664	Oryzias_latipes_hsok
ENSVPAG00000001781	SLIRP	81	53.409	ENSOMEG00000019321	slirp	88	53.409	Oryzias_melastigma
ENSVPAG00000001781	SLIRP	87	70.526	ENSPPAG00000040710	-	100	70.642	Pan_paniscus
ENSVPAG00000001781	SLIRP	81	85.227	ENSPPRG00000014350	SLIRP	90	85.227	Panthera_pardus
ENSVPAG00000001781	SLIRP	81	85.227	ENSPTIG00000014196	SLIRP	90	85.227	Panthera_tigris_altaica
ENSVPAG00000001781	SLIRP	85	70.652	ENSPTRG00000030691	SLIRP	100	70.755	Pan_troglodytes
ENSVPAG00000001781	SLIRP	100	73.394	ENSPANG00000026323	SLIRP	100	73.394	Papio_anubis
ENSVPAG00000001781	SLIRP	56	55.000	ENSPKIG00000008831	slirp	59	55.000	Paramormyrops_kingsleyae
ENSVPAG00000001781	SLIRP	64	57.971	ENSPMGG00000010541	slirp	79	57.971	Periophthalmus_magnuspinnatus
ENSVPAG00000001781	SLIRP	88	69.697	ENSPEMG00000013234	Slirp	96	69.091	Peromyscus_maniculatus_bairdii
ENSVPAG00000001781	SLIRP	68	47.945	ENSPMAG00000009355	slirp	79	47.945	Petromyzon_marinus
ENSVPAG00000001781	SLIRP	74	59.756	ENSPCIG00000026842	-	88	59.756	Phascolarctos_cinereus
ENSVPAG00000001781	SLIRP	81	49.425	ENSPFOG00000006758	slirp	86	49.425	Poecilia_formosa
ENSVPAG00000001781	SLIRP	81	49.438	ENSPLAG00000011140	slirp	89	49.438	Poecilia_latipinna
ENSVPAG00000001781	SLIRP	81	49.425	ENSPMEG00000019535	slirp	86	49.425	Poecilia_mexicana
ENSVPAG00000001781	SLIRP	81	49.425	ENSPREG00000011673	slirp	86	49.425	Poecilia_reticulata
ENSVPAG00000001781	SLIRP	88	67.368	ENSPPYG00000006030	SLIRP	97	67.925	Pongo_abelii
ENSVPAG00000001781	SLIRP	100	68.468	ENSPCOG00000015159	SLIRP	100	68.468	Propithecus_coquereli
ENSVPAG00000001781	SLIRP	81	55.682	ENSPNAG00000008633	slirp	89	55.682	Pygocentrus_nattereri
ENSVPAG00000001781	SLIRP	71	75.325	ENSRBIG00000032998	-	81	75.000	Rhinopithecus_bieti
ENSVPAG00000001781	SLIRP	88	67.368	ENSRBIG00000035817	-	100	67.925	Rhinopithecus_bieti
ENSVPAG00000001781	SLIRP	90	72.165	ENSRBIG00000032222	-	100	72.222	Rhinopithecus_bieti
ENSVPAG00000001781	SLIRP	69	76.000	ENSRBIG00000031396	-	86	75.581	Rhinopithecus_bieti
ENSVPAG00000001781	SLIRP	90	71.134	ENSRROG00000036656	-	100	71.296	Rhinopithecus_roxellana
ENSVPAG00000001781	SLIRP	75	72.840	ENSRROG00000041312	-	91	72.826	Rhinopithecus_roxellana
ENSVPAG00000001781	SLIRP	71	75.325	ENSRROG00000017133	-	92	75.000	Rhinopithecus_roxellana
ENSVPAG00000001781	SLIRP	69	77.333	ENSRROG00000035604	-	86	76.744	Rhinopithecus_roxellana
ENSVPAG00000001781	SLIRP	81	72.727	ENSSBOG00000020014	SLIRP	95	72.727	Saimiri_boliviensis_boliviensis
ENSVPAG00000001781	SLIRP	78	56.818	ENSSFOG00015011165	slirp	88	56.818	Scleropages_formosus
ENSVPAG00000001781	SLIRP	86	41.935	ENSSMAG00000012930	slirp	81	41.935	Scophthalmus_maximus
ENSVPAG00000001781	SLIRP	88	52.000	ENSSDUG00000021883	slirp	65	52.000	Seriola_dumerili
ENSVPAG00000001781	SLIRP	88	52.000	ENSSLDG00000023136	slirp	90	52.000	Seriola_lalandi_dorsalis
ENSVPAG00000001781	SLIRP	67	50.000	ENSSPUG00000009346	SLIRP	73	50.000	Sphenodon_punctatus
ENSVPAG00000001781	SLIRP	69	52.632	ENSSPAG00000013477	slirp	76	52.632	Stegastes_partitus
ENSVPAG00000001781	SLIRP	100	77.477	ENSSSCG00000028167	SLIRP	100	77.477	Sus_scrofa
ENSVPAG00000001781	SLIRP	66	53.521	ENSTGUG00000012337	SLIRP	84	49.451	Taeniopygia_guttata
ENSVPAG00000001781	SLIRP	73	52.500	ENSTRUG00000020127	slirp	78	52.500	Takifugu_rubripes
ENSVPAG00000001781	SLIRP	100	78.378	ENSUAMG00000022445	SLIRP	100	78.378	Ursus_americanus
ENSVPAG00000001781	SLIRP	100	79.279	ENSUMAG00000007166	SLIRP	100	79.279	Ursus_maritimus
ENSVPAG00000001781	SLIRP	86	80.208	ENSVVUG00000004436	SLIRP	100	78.378	Vulpes_vulpes
ENSVPAG00000001781	SLIRP	66	54.930	ENSXETG00000030343	SLIRP	80	54.930	Xenopus_tropicalis
ENSVPAG00000001781	SLIRP	81	48.276	ENSXCOG00000009422	slirp	86	48.276	Xiphophorus_couchianus
ENSVPAG00000001781	SLIRP	81	49.438	ENSXMAG00000015655	slirp	89	49.438	Xiphophorus_maculatus