EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000001796 (Gene tree)
Gene ID: -
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 10023 bases
Position: chrGeneScaffold_952:6806-16828
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000001656	RRM_1	PF00076.22	3.6e-47	1	4
ENSVPAP00000001656	RRM_1	PF00076.22	3.6e-47	2	4
ENSVPAP00000001656	RRM_1	PF00076.22	3.6e-47	3	4
ENSVPAP00000001656	RRM_1	PF00076.22	3.6e-47	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000001796	NCL-201	2112	-	ENSVPAP00000001656	703 (aa)	-	UPI00018BCCB5

Gene Model

Click here to download ENSVPAG00000001796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000001796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000001796	NCL	69	88.732	ENSG00000115053	NCL	93	86.192	Homo_sapiens
ENSVPAG00000001796	NCL	69	89.437	ENSAMEG00000016289	NCL	68	89.437	Ailuropoda_melanoleuca
ENSVPAG00000001796	NCL	69	87.324	ENSANAG00000035814	-	69	87.324	Aotus_nancymaae
ENSVPAG00000001796	NCL	77	78.906	ENSANAG00000024378	-	76	78.788	Aotus_nancymaae
ENSVPAG00000001796	NCL	51	86.977	ENSBTAG00000050728	-	80	86.977	Bos_taurus
ENSVPAG00000001796	NCL	51	88.837	ENSBTAG00000026909	-	94	84.507	Bos_taurus
ENSVPAG00000001796	NCL	69	88.028	ENSBTAG00000016174	NCL	68	88.028	Bos_taurus
ENSVPAG00000001796	NCL	69	84.058	ENSCJAG00000013538	NCL	70	84.058	Callithrix_jacchus
ENSVPAG00000001796	NCL	69	90.845	ENSCAFG00000011037	NCL	69	90.845	Canis_familiaris
ENSVPAG00000001796	NCL	62	88.764	ENSCAFG00020023145	NCL	64	88.764	Canis_lupus_dingo
ENSVPAG00000001796	NCL	62	86.022	ENSCHIG00000010894	-	66	86.022	Capra_hircus
ENSVPAG00000001796	NCL	72	68.986	ENSCHIG00000012143	-	72	68.986	Capra_hircus
ENSVPAG00000001796	NCL	69	87.324	ENSCHIG00000021052	-	93	87.324	Capra_hircus
ENSVPAG00000001796	NCL	69	77.465	ENSCHIG00000026149	-	67	78.400	Capra_hircus
ENSVPAG00000001796	NCL	69	90.141	ENSTSYG00000004355	-	69	90.141	Carlito_syrichta
ENSVPAG00000001796	NCL	69	86.806	ENSTSYG00000029779	-	70	86.806	Carlito_syrichta
ENSVPAG00000001796	NCL	69	73.944	ENSTSYG00000036886	-	70	82.500	Carlito_syrichta
ENSVPAG00000001796	NCL	68	74.783	ENSCAPG00000009405	NCL	67	74.783	Cavia_aperea
ENSVPAG00000001796	NCL	69	80.290	ENSCPOG00000001034	NCL	69	80.290	Cavia_porcellus
ENSVPAG00000001796	NCL	69	88.028	ENSCCAG00000021040	-	69	88.028	Cebus_capucinus
ENSVPAG00000001796	NCL	69	88.732	ENSCATG00000037033	NCL	69	88.732	Cercocebus_atys
ENSVPAG00000001796	NCL	69	80.580	ENSCLAG00000013080	NCL	68	80.580	Chinchilla_lanigera
ENSVPAG00000001796	NCL	70	69.452	ENSCGRG00001022350	-	65	81.395	Cricetulus_griseus_chok1gshd
ENSVPAG00000001796	NCL	69	86.620	ENSCGRG00001024315	-	68	86.620	Cricetulus_griseus_chok1gshd
ENSVPAG00000001796	NCL	65	84.685	ENSCGRG00000017894	-	66	84.685	Cricetulus_griseus_crigri
ENSVPAG00000001796	NCL	69	69.452	ENSCGRG00000000507	-	65	81.395	Cricetulus_griseus_crigri
ENSVPAG00000001796	NCL	69	73.427	ENSDNOG00000046347	-	70	73.178	Dasypus_novemcinctus
ENSVPAG00000001796	NCL	69	82.558	ENSDNOG00000010783	-	69	82.558	Dasypus_novemcinctus
ENSVPAG00000001796	NCL	69	73.239	ENSDORG00000023596	-	70	75.540	Dipodomys_ordii
ENSVPAG00000001796	NCL	69	78.986	ENSDORG00000012513	-	69	80.986	Dipodomys_ordii
ENSVPAG00000001796	NCL	69	55.714	ENSETEG00000008139	-	81	54.545	Echinops_telfairi
ENSVPAG00000001796	NCL	63	77.971	ENSETEG00000018937	-	60	78.198	Echinops_telfairi
ENSVPAG00000001796	NCL	67	89.683	ENSEASG00005008488	NCL	87	89.683	Equus_asinus_asinus
ENSVPAG00000001796	NCL	69	90.141	ENSECAG00000021868	NCL	68	90.141	Equus_caballus
ENSVPAG00000001796	NCL	63	77.971	ENSEEUG00000005913	NCL	63	77.971	Erinaceus_europaeus
ENSVPAG00000001796	NCL	69	90.845	ENSFCAG00000027622	NCL	68	90.845	Felis_catus
ENSVPAG00000001796	NCL	68	80.435	ENSFDAG00000014291	NCL	66	80.290	Fukomys_damarensis
ENSVPAG00000001796	NCL	69	88.732	ENSGGOG00000004300	NCL	86	88.235	Gorilla_gorilla
ENSVPAG00000001796	NCL	69	80.556	ENSHGLG00000002031	-	69	80.290	Heterocephalus_glaber_female
ENSVPAG00000001796	NCL	69	76.232	ENSHGLG00000011069	-	73	76.232	Heterocephalus_glaber_female
ENSVPAG00000001796	NCL	50	79.535	ENSHGLG00000005133	-	84	79.535	Heterocephalus_glaber_female
ENSVPAG00000001796	NCL	69	80.556	ENSHGLG00100014537	-	70	80.000	Heterocephalus_glaber_male
ENSVPAG00000001796	NCL	69	76.224	ENSHGLG00100000745	-	77	75.362	Heterocephalus_glaber_male
ENSVPAG00000001796	NCL	69	86.620	ENSJJAG00000016165	Ncl	69	86.029	Jaculus_jaculus
ENSVPAG00000001796	NCL	70	73.620	ENSLAFG00000013061	NCL	71	77.465	Loxodonta_africana
ENSVPAG00000001796	NCL	69	88.732	ENSMFAG00000040385	NCL	69	88.732	Macaca_fascicularis
ENSVPAG00000001796	NCL	69	88.732	ENSMMUG00000018094	NCL	86	88.732	Macaca_mulatta
ENSVPAG00000001796	NCL	69	88.732	ENSMNEG00000023839	NCL	85	87.786	Macaca_nemestrina
ENSVPAG00000001796	NCL	69	88.732	ENSMLEG00000028935	NCL	69	88.732	Mandrillus_leucophaeus
ENSVPAG00000001796	NCL	69	88.028	ENSMICG00000002538	-	69	88.028	Microcebus_murinus
ENSVPAG00000001796	NCL	64	79.021	ENSMICG00000029975	-	80	80.000	Microcebus_murinus
ENSVPAG00000001796	NCL	69	78.873	MGP_CAROLIEiJ_G0014362	Ncl	69	78.873	Mus_caroli
ENSVPAG00000001796	NCL	69	78.873	ENSMUSG00000026234	Ncl	69	78.873	Mus_musculus
ENSVPAG00000001796	NCL	69	78.873	MGP_PahariEiJ_G0027599	Ncl	69	78.873	Mus_pahari
ENSVPAG00000001796	NCL	69	78.873	MGP_SPRETEiJ_G0015164	Ncl	69	78.873	Mus_spretus
ENSVPAG00000001796	NCL	69	84.928	ENSMLUG00000014547	NCL	69	84.928	Myotis_lucifugus
ENSVPAG00000001796	NCL	69	81.690	ENSNGAG00000002454	-	65	84.553	Nannospalax_galili
ENSVPAG00000001796	NCL	68	72.593	ENSNGAG00000006188	-	67	74.194	Nannospalax_galili
ENSVPAG00000001796	NCL	62	85.106	ENSNLEG00000014107	-	58	86.250	Nomascus_leucogenys
ENSVPAG00000001796	NCL	69	72.464	ENSODEG00000002441	-	82	84.186	Octodon_degus
ENSVPAG00000001796	NCL	72	66.265	ENSODEG00000007803	-	68	65.663	Octodon_degus
ENSVPAG00000001796	NCL	73	78.551	ENSODEG00000002748	-	77	78.779	Octodon_degus
ENSVPAG00000001796	NCL	69	77.681	ENSODEG00000003281	-	73	77.681	Octodon_degus
ENSVPAG00000001796	NCL	69	80.580	ENSOCUG00000004312	NCL	75	80.580	Oryctolagus_cuniculus
ENSVPAG00000001796	NCL	68	75.148	ENSOGAG00000027852	NCL	70	75.148	Otolemur_garnettii
ENSVPAG00000001796	NCL	64	68.406	ENSOARG00000004072	-	69	68.406	Ovis_aries
ENSVPAG00000001796	NCL	57	82.029	ENSOARG00000013710	-	78	93.750	Ovis_aries
ENSVPAG00000001796	NCL	55	85.417	ENSOARG00000013270	-	61	89.011	Ovis_aries
ENSVPAG00000001796	NCL	70	82.759	ENSOARG00000020709	-	68	82.759	Ovis_aries
ENSVPAG00000001796	NCL	69	88.732	ENSPPAG00000011619	NCL	86	88.235	Pan_paniscus
ENSVPAG00000001796	NCL	69	90.845	ENSPPRG00000012603	NCL	69	90.845	Panthera_pardus
ENSVPAG00000001796	NCL	68	90.441	ENSPTIG00000010393	NCL	68	90.441	Panthera_tigris_altaica
ENSVPAG00000001796	NCL	69	88.732	ENSPTRG00000013025	NCL	86	88.235	Pan_troglodytes
ENSVPAG00000001796	NCL	69	88.732	ENSPANG00000010292	NCL	69	88.732	Papio_anubis
ENSVPAG00000001796	NCL	66	88.732	ENSPPYG00000013265	NCL	66	88.732	Pongo_abelii
ENSVPAG00000001796	NCL	69	90.141	ENSPCOG00000003051	-	69	90.141	Propithecus_coquereli
ENSVPAG00000001796	NCL	69	87.681	ENSPCOG00000004160	-	69	88.800	Propithecus_coquereli
ENSVPAG00000001796	NCL	69	89.583	ENSPVAG00000000297	NCL	69	89.583	Pteropus_vampyrus
ENSVPAG00000001796	NCL	69	81.690	ENSRNOG00000018273	Ncl	68	81.690	Rattus_norvegicus
ENSVPAG00000001796	NCL	57	80.986	ENSRBIG00000035396	-	80	79.522	Rhinopithecus_bieti
ENSVPAG00000001796	NCL	69	88.321	ENSRBIG00000037525	-	68	88.800	Rhinopithecus_bieti
ENSVPAG00000001796	NCL	69	88.028	ENSRROG00000036103	-	71	95.294	Rhinopithecus_roxellana
ENSVPAG00000001796	NCL	69	88.028	ENSRROG00000028756	-	73	95.814	Rhinopithecus_roxellana
ENSVPAG00000001796	NCL	68	79.577	ENSSBOG00000027549	-	77	76.877	Saimiri_boliviensis_boliviensis
ENSVPAG00000001796	NCL	53	72.093	ENSSBOG00000023094	-	81	72.093	Saimiri_boliviensis_boliviensis
ENSVPAG00000001796	NCL	69	88.028	ENSSBOG00000029193	-	69	88.028	Saimiri_boliviensis_boliviensis
ENSVPAG00000001796	NCL	66	90.984	ENSSSCG00000016275	NCL	68	90.141	Sus_scrofa
ENSVPAG00000001796	NCL	65	72.566	ENSTBEG00000002469	-	66	70.725	Tupaia_belangeri
ENSVPAG00000001796	NCL	63	83.505	ENSTBEG00000001546	-	62	83.505	Tupaia_belangeri
ENSVPAG00000001796	NCL	66	90.164	ENSTTRG00000009094	NCL	69	90.141	Tursiops_truncatus
ENSVPAG00000001796	NCL	63	86.735	ENSUAMG00000005639	NCL	82	75.122	Ursus_americanus
ENSVPAG00000001796	NCL	69	89.437	ENSUMAG00000015789	NCL	69	89.437	Ursus_maritimus
ENSVPAG00000001796	NCL	69	90.845	ENSVVUG00000025564	NCL	72	90.845	Vulpes_vulpes