EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000001949 (Gene tree)
Gene ID: -
Gene Symbol: RBM4
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: RNA binding motif protein 4
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 4140 bases
Position: chrGeneScaffold_3564:145392-149531
Accession: 9901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000001800	zf-CCHC	PF00098.23	7.2e-08	1	1
ENSVPAP00000001800	RRM_5	PF13893.6	1.3e-08	1	2
ENSVPAP00000001800	RRM_5	PF13893.6	1.3e-08	2	2
ENSVPAP00000001800	RRM_1	PF00076.22	6.9e-35	1	2
ENSVPAP00000001800	RRM_1	PF00076.22	6.9e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000001948	RBM4-201	1074	-	ENSVPAP00000001800	357 (aa)	-	UPI00018BD7BE

Gene Model

Click here to download ENSVPAG00000001949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000001949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000001949	RBM4	100	87.945	ENSVPAG00000001950	RBM4B	100	87.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000001949	RBM4	100	87.671	ENSG00000173914	RBM4B	97	97.842	Homo_sapiens
ENSVPAG00000001949	RBM4	100	96.712	ENSG00000173933	RBM4	100	100.000	Homo_sapiens
ENSVPAG00000001949	RBM4	99	69.945	ENSG00000248643	RBM14-RBM4	100	71.585	Homo_sapiens
ENSVPAG00000001949	RBM4	100	97.534	ENSAMEG00000010914	RBM4	100	97.534	Ailuropoda_melanoleuca
ENSVPAG00000001949	RBM4	100	88.219	ENSAMEG00000010906	RBM4B	100	87.671	Ailuropoda_melanoleuca
ENSVPAG00000001949	RBM4	100	87.671	ENSANAG00000023478	RBM4B	97	97.842	Aotus_nancymaae
ENSVPAG00000001949	RBM4	100	93.425	ENSBTAG00000031688	RBM4	100	94.795	Bos_taurus
ENSVPAG00000001949	RBM4	100	88.493	ENSBTAG00000000423	RBM4B	100	87.945	Bos_taurus
ENSVPAG00000001949	RBM4	100	87.397	ENSCJAG00000013666	RBM4B	97	97.842	Callithrix_jacchus
ENSVPAG00000001949	RBM4	100	97.534	ENSCAFG00000012388	RBM4	100	97.534	Canis_familiaris
ENSVPAG00000001949	RBM4	100	87.945	ENSCAFG00000012378	RBM4B	100	87.397	Canis_familiaris
ENSVPAG00000001949	RBM4	100	97.534	ENSCAFG00020015515	RBM4	100	97.534	Canis_lupus_dingo
ENSVPAG00000001949	RBM4	100	87.945	ENSCAFG00020015519	RBM4B	100	87.397	Canis_lupus_dingo
ENSVPAG00000001949	RBM4	100	93.425	ENSCHIG00000020613	RBM4	100	94.795	Capra_hircus
ENSVPAG00000001949	RBM4	100	88.493	ENSCHIG00000008907	RBM4B	100	87.945	Capra_hircus
ENSVPAG00000001949	RBM4	65	79.253	ENSTSYG00000009580	RBM4B	96	78.423	Carlito_syrichta
ENSVPAG00000001949	RBM4	100	87.397	ENSCAPG00000009570	RBM4B	100	87.123	Cavia_aperea
ENSVPAG00000001949	RBM4	100	96.712	ENSCAPG00000016600	RBM4	100	96.712	Cavia_aperea
ENSVPAG00000001949	RBM4	100	87.397	ENSCPOG00000013689	RBM4B	100	87.123	Cavia_porcellus
ENSVPAG00000001949	RBM4	100	96.712	ENSCPOG00000013194	RBM4	100	96.712	Cavia_porcellus
ENSVPAG00000001949	RBM4	56	73.632	ENSCCAG00000023319	-	100	73.632	Cebus_capucinus
ENSVPAG00000001949	RBM4	100	87.671	ENSCCAG00000016501	RBM4B	97	97.842	Cebus_capucinus
ENSVPAG00000001949	RBM4	100	87.671	ENSCATG00000035353	RBM4B	97	97.842	Cercocebus_atys
ENSVPAG00000001949	RBM4	100	96.438	ENSCLAG00000014756	RBM4	100	96.438	Chinchilla_lanigera
ENSVPAG00000001949	RBM4	100	87.397	ENSCLAG00000015287	RBM4B	100	87.123	Chinchilla_lanigera
ENSVPAG00000001949	RBM4	100	87.671	ENSCSAG00000008361	RBM4B	100	87.123	Chlorocebus_sabaeus
ENSVPAG00000001949	RBM4	100	88.767	ENSCHOG00000002892	RBM4B	100	88.219	Choloepus_hoffmanni
ENSVPAG00000001949	RBM4	61	94.714	ENSCHOG00000009753	RBM14-RBM4	100	94.714	Choloepus_hoffmanni
ENSVPAG00000001949	RBM4	100	74.271	ENSCPBG00000023800	-	100	74.005	Chrysemys_picta_bellii
ENSVPAG00000001949	RBM4	100	87.671	ENSCANG00000021868	RBM4B	97	97.842	Colobus_angolensis_palliatus
ENSVPAG00000001949	RBM4	100	84.384	ENSCGRG00001024693	Rbm4b	100	84.932	Cricetulus_griseus_chok1gshd
ENSVPAG00000001949	RBM4	100	91.507	ENSCGRG00001016609	-	97	98.551	Cricetulus_griseus_chok1gshd
ENSVPAG00000001949	RBM4	100	91.507	ENSCGRG00000010183	-	97	98.551	Cricetulus_griseus_crigri
ENSVPAG00000001949	RBM4	100	84.384	ENSCGRG00000012112	Rbm4b	100	84.932	Cricetulus_griseus_crigri
ENSVPAG00000001949	RBM4	100	88.219	ENSDNOG00000019500	-	100	87.671	Dasypus_novemcinctus
ENSVPAG00000001949	RBM4	100	87.123	ENSDNOG00000045639	-	100	86.575	Dasypus_novemcinctus
ENSVPAG00000001949	RBM4	100	96.986	ENSDNOG00000032390	RBM4	100	96.986	Dasypus_novemcinctus
ENSVPAG00000001949	RBM4	100	92.055	ENSDORG00000004538	-	97	97.826	Dipodomys_ordii
ENSVPAG00000001949	RBM4	100	84.932	ENSDORG00000029108	Rbm4b	100	85.479	Dipodomys_ordii
ENSVPAG00000001949	RBM4	61	66.210	ENSETEG00000018142	-	100	66.667	Echinops_telfairi
ENSVPAG00000001949	RBM4	100	87.945	ENSEASG00005005068	RBM4B	100	87.397	Equus_asinus_asinus
ENSVPAG00000001949	RBM4	100	95.616	ENSEASG00005005064	RBM4	100	95.616	Equus_asinus_asinus
ENSVPAG00000001949	RBM4	100	87.671	ENSECAG00000022987	RBM4B	100	87.123	Equus_caballus
ENSVPAG00000001949	RBM4	100	95.616	ENSECAG00000022940	RBM4	100	95.616	Equus_caballus
ENSVPAG00000001949	RBM4	100	87.397	ENSEEUG00000000058	RBM4B	100	87.397	Erinaceus_europaeus
ENSVPAG00000001949	RBM4	100	87.671	ENSFCAG00000007394	RBM4B	97	97.842	Felis_catus
ENSVPAG00000001949	RBM4	100	97.534	ENSFCAG00000029651	RBM4	100	97.534	Felis_catus
ENSVPAG00000001949	RBM4	100	68.579	ENSFALG00000002073	-	100	67.760	Ficedula_albicollis
ENSVPAG00000001949	RBM4	100	95.890	ENSFDAG00000005447	RBM4	97	99.275	Fukomys_damarensis
ENSVPAG00000001949	RBM4	100	87.397	ENSFDAG00000015530	RBM4B	100	87.123	Fukomys_damarensis
ENSVPAG00000001949	RBM4	100	75.741	ENSGALG00000037946	-	100	75.472	Gallus_gallus
ENSVPAG00000001949	RBM4	100	74.603	ENSGAGG00000008553	-	100	74.339	Gopherus_agassizii
ENSVPAG00000001949	RBM4	100	87.671	ENSGGOG00000011698	RBM4B	97	97.842	Gorilla_gorilla
ENSVPAG00000001949	RBM4	100	87.945	ENSHGLG00000016412	-	100	87.397	Heterocephalus_glaber_female
ENSVPAG00000001949	RBM4	78	55.490	ENSHGLG00000000117	-	95	65.385	Heterocephalus_glaber_female
ENSVPAG00000001949	RBM4	100	73.425	ENSHGLG00000002853	-	100	73.699	Heterocephalus_glaber_female
ENSVPAG00000001949	RBM4	100	95.890	ENSHGLG00000009991	RBM4	97	99.275	Heterocephalus_glaber_female
ENSVPAG00000001949	RBM4	96	74.499	ENSHGLG00100020033	-	100	74.785	Heterocephalus_glaber_male
ENSVPAG00000001949	RBM4	100	86.885	ENSHGLG00100003978	-	100	86.612	Heterocephalus_glaber_male
ENSVPAG00000001949	RBM4	100	82.192	ENSHGLG00100003854	RBM4	97	99.275	Heterocephalus_glaber_male
ENSVPAG00000001949	RBM4	100	97.260	ENSSTOG00000022811	RBM4	100	97.260	Ictidomys_tridecemlineatus
ENSVPAG00000001949	RBM4	100	87.671	ENSSTOG00000011226	RBM4B	100	87.397	Ictidomys_tridecemlineatus
ENSVPAG00000001949	RBM4	100	83.836	ENSJJAG00000020870	Rbm4b	100	83.562	Jaculus_jaculus
ENSVPAG00000001949	RBM4	100	93.151	ENSLAFG00000028147	-	100	93.973	Loxodonta_africana
ENSVPAG00000001949	RBM4	100	84.110	ENSLAFG00000002285	RBM4B	100	84.658	Loxodonta_africana
ENSVPAG00000001949	RBM4	100	87.671	ENSMFAG00000033927	RBM4B	97	98.551	Macaca_fascicularis
ENSVPAG00000001949	RBM4	100	87.671	ENSMNEG00000043371	RBM4B	97	97.842	Macaca_nemestrina
ENSVPAG00000001949	RBM4	100	87.671	ENSMLEG00000028563	RBM4B	97	98.551	Mandrillus_leucophaeus
ENSVPAG00000001949	RBM4	100	84.110	ENSMAUG00000017027	Rbm4b	100	84.384	Mesocricetus_auratus
ENSVPAG00000001949	RBM4	100	88.219	ENSMICG00000003820	RBM4B	97	97.842	Microcebus_murinus
ENSVPAG00000001949	RBM4	100	84.658	ENSMOCG00000001835	Rbm4b	100	85.205	Microtus_ochrogaster
ENSVPAG00000001949	RBM4	100	89.918	ENSMODG00000008056	-	100	90.191	Monodelphis_domestica
ENSVPAG00000001949	RBM4	99	66.757	MGP_CAROLIEiJ_G0022514	-	100	67.302	Mus_caroli
ENSVPAG00000001949	RBM4	100	85.205	MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	Mus_caroli
ENSVPAG00000001949	RBM4	100	91.257	MGP_CAROLIEiJ_G0022516	-	97	98.551	Mus_caroli
ENSVPAG00000001949	RBM4	100	91.257	ENSMUSG00000096370	Gm21992	100	91.803	Mus_musculus
ENSVPAG00000001949	RBM4	100	84.932	ENSMUSG00000033760	Rbm4b	91	97.842	Mus_musculus
ENSVPAG00000001949	RBM4	100	91.257	ENSMUSG00000094936	Rbm4	100	98.837	Mus_musculus
ENSVPAG00000001949	RBM4	100	91.530	MGP_PahariEiJ_G0014013	-	97	98.551	Mus_pahari
ENSVPAG00000001949	RBM4	100	84.658	MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	Mus_pahari
ENSVPAG00000001949	RBM4	100	91.530	MGP_PahariEiJ_G0014011	-	100	91.803	Mus_pahari
ENSVPAG00000001949	RBM4	100	74.390	MGP_SPRETEiJ_G0023430	-	100	75.000	Mus_spretus
ENSVPAG00000001949	RBM4	100	74.390	MGP_SPRETEiJ_G0023428	-	94	75.000	Mus_spretus
ENSVPAG00000001949	RBM4	100	73.958	MGP_SPRETEiJ_G0023429	-	100	74.653	Mus_spretus
ENSVPAG00000001949	RBM4	100	88.493	ENSMPUG00000003450	RBM4B	100	87.945	Mustela_putorius_furo
ENSVPAG00000001949	RBM4	100	97.260	ENSMPUG00000003443	RBM4	100	97.260	Mustela_putorius_furo
ENSVPAG00000001949	RBM4	99	94.766	ENSMLUG00000004076	RBM4	95	94.766	Myotis_lucifugus
ENSVPAG00000001949	RBM4	100	86.301	ENSMLUG00000001290	RBM4B	100	85.479	Myotis_lucifugus
ENSVPAG00000001949	RBM4	100	84.890	ENSNGAG00000016292	Rbm4b	100	85.753	Nannospalax_galili
ENSVPAG00000001949	RBM4	100	86.849	ENSNLEG00000006213	RBM4B	97	97.842	Nomascus_leucogenys
ENSVPAG00000001949	RBM4	100	96.712	ENSNLEG00000035021	RBM4	97	100.000	Nomascus_leucogenys
ENSVPAG00000001949	RBM4	61	85.903	ENSMEUG00000005739	-	100	85.903	Notamacropus_eugenii
ENSVPAG00000001949	RBM4	100	88.493	ENSMEUG00000001445	-	100	88.493	Notamacropus_eugenii
ENSVPAG00000001949	RBM4	100	88.493	ENSOPRG00000009158	RBM4B	100	87.671	Ochotona_princeps
ENSVPAG00000001949	RBM4	100	96.164	ENSOPRG00000009149	RBM4	100	96.164	Ochotona_princeps
ENSVPAG00000001949	RBM4	100	78.431	ENSODEG00000001866	-	100	78.992	Octodon_degus
ENSVPAG00000001949	RBM4	100	87.671	ENSODEG00000017696	-	100	87.397	Octodon_degus
ENSVPAG00000001949	RBM4	100	80.672	ENSOANG00000003143	-	84	79.609	Ornithorhynchus_anatinus
ENSVPAG00000001949	RBM4	100	86.835	ENSOANG00000011036	-	100	86.555	Ornithorhynchus_anatinus
ENSVPAG00000001949	RBM4	100	87.945	ENSOCUG00000006695	LARK	100	87.397	Oryctolagus_cuniculus
ENSVPAG00000001949	RBM4	100	97.260	ENSOCUG00000004731	RBM4	100	97.260	Oryctolagus_cuniculus
ENSVPAG00000001949	RBM4	100	96.712	ENSOGAG00000015647	RBM4	100	96.712	Otolemur_garnettii
ENSVPAG00000001949	RBM4	100	87.945	ENSOGAG00000015648	RBM4B	100	87.397	Otolemur_garnettii
ENSVPAG00000001949	RBM4	100	88.219	ENSOARG00000007759	RBM4B	100	88.219	Ovis_aries
ENSVPAG00000001949	RBM4	100	92.582	ENSOARG00000007700	RBM4	100	93.681	Ovis_aries
ENSVPAG00000001949	RBM4	100	87.671	ENSPPAG00000015125	RBM4B	97	97.842	Pan_paniscus
ENSVPAG00000001949	RBM4	100	87.397	ENSPPRG00000003388	RBM4B	97	97.842	Panthera_pardus
ENSVPAG00000001949	RBM4	100	97.534	ENSPPRG00000003533	RBM4	100	97.534	Panthera_pardus
ENSVPAG00000001949	RBM4	100	87.397	ENSPTIG00000015426	RBM4B	97	97.842	Panthera_tigris_altaica
ENSVPAG00000001949	RBM4	100	84.530	ENSPTIG00000016180	RBM4	97	99.275	Panthera_tigris_altaica
ENSVPAG00000001949	RBM4	100	87.671	ENSPTRG00000003935	RBM4B	97	97.842	Pan_troglodytes
ENSVPAG00000001949	RBM4	100	87.671	ENSPANG00000020672	RBM4B	97	97.842	Papio_anubis
ENSVPAG00000001949	RBM4	100	74.394	ENSPSIG00000003430	-	100	74.124	Pelodiscus_sinensis
ENSVPAG00000001949	RBM4	75	77.739	ENSPSIG00000003477	-	95	78.049	Pelodiscus_sinensis
ENSVPAG00000001949	RBM4	100	84.932	ENSPEMG00000009144	Rbm4b	100	85.479	Peromyscus_maniculatus_bairdii
ENSVPAG00000001949	RBM4	100	87.671	ENSPPYG00000003010	RBM4B	100	87.123	Pongo_abelii
ENSVPAG00000001949	RBM4	100	95.616	ENSPPYG00000003012	RBM4	100	95.616	Pongo_abelii
ENSVPAG00000001949	RBM4	100	95.604	ENSPCAG00000003393	-	100	95.604	Procavia_capensis
ENSVPAG00000001949	RBM4	100	87.945	ENSPCOG00000027885	RBM4B	97	97.842	Propithecus_coquereli
ENSVPAG00000001949	RBM4	100	96.712	ENSPVAG00000010486	RBM4	100	96.712	Pteropus_vampyrus
ENSVPAG00000001949	RBM4	100	88.219	ENSPVAG00000010487	RBM4B	100	87.671	Pteropus_vampyrus
ENSVPAG00000001949	RBM4	100	85.479	ENSRNOG00000061795	Rbm4b	100	86.027	Rattus_norvegicus
ENSVPAG00000001949	RBM4	100	94.262	ENSRNOG00000050741	Rbm4	97	98.551	Rattus_norvegicus
ENSVPAG00000001949	RBM4	100	87.671	ENSRBIG00000019394	RBM4B	97	97.842	Rhinopithecus_bieti
ENSVPAG00000001949	RBM4	100	87.671	ENSRROG00000032850	RBM4B	97	97.842	Rhinopithecus_roxellana
ENSVPAG00000001949	RBM4	100	87.123	ENSSBOG00000034474	RBM4B	97	97.122	Saimiri_boliviensis_boliviensis
ENSVPAG00000001949	RBM4	100	86.849	ENSSHAG00000008386	-	100	86.575	Sarcophilus_harrisii
ENSVPAG00000001949	RBM4	100	87.945	ENSSARG00000010710	RBM4B	100	87.671	Sorex_araneus
ENSVPAG00000001949	RBM4	100	97.534	ENSSSCG00000032437	RBM4	100	97.534	Sus_scrofa
ENSVPAG00000001949	RBM4	76	77.700	ENSTGUG00000016779	-	94	77.700	Taeniopygia_guttata
ENSVPAG00000001949	RBM4	100	86.027	ENSTBEG00000003748	RBM4B	100	85.753	Tupaia_belangeri
ENSVPAG00000001949	RBM4	64	99.070	ENSTBEG00000003727	-	68	99.070	Tupaia_belangeri
ENSVPAG00000001949	RBM4	100	95.890	ENSTTRG00000011164	RBM4	100	95.890	Tursiops_truncatus
ENSVPAG00000001949	RBM4	100	87.945	ENSTTRG00000011166	RBM4B	100	87.397	Tursiops_truncatus
ENSVPAG00000001949	RBM4	100	97.534	ENSUAMG00000014882	RBM4	100	97.534	Ursus_americanus
ENSVPAG00000001949	RBM4	100	88.493	ENSUAMG00000004745	RBM4B	100	87.945	Ursus_americanus
ENSVPAG00000001949	RBM4	64	99.123	ENSUMAG00000011738	-	97	99.275	Ursus_maritimus
ENSVPAG00000001949	RBM4	100	87.945	ENSVVUG00000010619	RBM4B	100	87.397	Vulpes_vulpes
ENSVPAG00000001949	RBM4	100	96.986	ENSVVUG00000010622	RBM4	100	96.986	Vulpes_vulpes