EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000002162 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 44564 bases
Position: chrGeneScaffold_1154:691138-735701
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000002000	Rif1_N	PF12231.8	2.2e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000002163	RIF1-201	7305	-	ENSVPAP00000002000	2434 (aa)	-	UPI00018BEB0E

Gene Model

Click here to download ENSVPAG00000002162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000002162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000002162	RIF1	100	78.082	ENSG00000080345	RIF1	97	86.861	Homo_sapiens
ENSVPAG00000002162	RIF1	50	48.504	ENSAPOG00000011073	rif1	51	48.504	Acanthochromis_polyacanthus
ENSVPAG00000002162	RIF1	99	81.242	ENSAMEG00000008461	RIF1	100	81.058	Ailuropoda_melanoleuca
ENSVPAG00000002162	RIF1	63	48.940	ENSACIG00000017765	rif1	70	48.940	Amphilophus_citrinellus
ENSVPAG00000002162	RIF1	65	49.522	ENSAOCG00000017231	rif1	67	49.522	Amphiprion_ocellaris
ENSVPAG00000002162	RIF1	65	54.613	ENSAPEG00000013228	rif1	66	53.589	Amphiprion_percula
ENSVPAG00000002162	RIF1	65	47.072	ENSATEG00000022887	rif1	68	47.304	Anabas_testudineus
ENSVPAG00000002162	RIF1	88	66.568	ENSAPLG00000007092	RIF1	97	66.568	Anas_platyrhynchos
ENSVPAG00000002162	RIF1	85	55.906	ENSACAG00000003714	RIF1	91	55.906	Anolis_carolinensis
ENSVPAG00000002162	RIF1	100	77.115	ENSANAG00000024840	RIF1	100	76.904	Aotus_nancymaae
ENSVPAG00000002162	RIF1	50	50.276	ENSAMXG00000010910	rif1	52	50.352	Astyanax_mexicanus
ENSVPAG00000002162	RIF1	94	83.039	ENSBTAG00000021020	RIF1	100	83.039	Bos_taurus
ENSVPAG00000002162	RIF1	100	76.663	ENSCJAG00000003138	RIF1	100	76.452	Callithrix_jacchus
ENSVPAG00000002162	RIF1	100	80.508	ENSCAFG00000005670	RIF1	97	80.508	Canis_familiaris
ENSVPAG00000002162	RIF1	100	79.596	ENSCAFG00020016401	RIF1	100	79.596	Canis_lupus_dingo
ENSVPAG00000002162	RIF1	100	82.869	ENSCHIG00000020327	RIF1	100	82.869	Capra_hircus
ENSVPAG00000002162	RIF1	99	75.151	ENSTSYG00000008861	RIF1	100	75.191	Carlito_syrichta
ENSVPAG00000002162	RIF1	80	75.297	ENSCAPG00000008957	RIF1	96	75.297	Cavia_aperea
ENSVPAG00000002162	RIF1	99	68.795	ENSCPOG00000037898	RIF1	99	68.921	Cavia_porcellus
ENSVPAG00000002162	RIF1	100	76.309	ENSCCAG00000024760	RIF1	100	76.179	Cebus_capucinus
ENSVPAG00000002162	RIF1	100	78.243	ENSCATG00000033353	RIF1	100	78.226	Cercocebus_atys
ENSVPAG00000002162	RIF1	96	71.848	ENSCLAG00000001517	RIF1	99	71.848	Chinchilla_lanigera
ENSVPAG00000002162	RIF1	100	78.243	ENSCSAG00000016089	RIF1	100	78.226	Chlorocebus_sabaeus
ENSVPAG00000002162	RIF1	97	76.087	ENSCHOG00000007187	RIF1	97	76.087	Choloepus_hoffmanni
ENSVPAG00000002162	RIF1	90	70.030	ENSCPBG00000025885	RIF1	96	71.217	Chrysemys_picta_bellii
ENSVPAG00000002162	RIF1	100	77.044	ENSCANG00000028962	RIF1	100	77.675	Colobus_angolensis_palliatus
ENSVPAG00000002162	RIF1	99	67.418	ENSCGRG00001024589	Rif1	100	67.659	Cricetulus_griseus_chok1gshd
ENSVPAG00000002162	RIF1	99	68.625	ENSCGRG00000010713	Rif1	100	68.870	Cricetulus_griseus_crigri
ENSVPAG00000002162	RIF1	59	55.602	ENSCSEG00000003945	rif1	66	50.512	Cynoglossus_semilaevis
ENSVPAG00000002162	RIF1	65	46.915	ENSCVAG00000022479	rif1	70	46.915	Cyprinodon_variegatus
ENSVPAG00000002162	RIF1	62	49.524	ENSDARG00000062650	rif1	51	49.644	Danio_rerio
ENSVPAG00000002162	RIF1	99	74.828	ENSDNOG00000011194	RIF1	97	74.696	Dasypus_novemcinctus
ENSVPAG00000002162	RIF1	94	69.371	ENSETEG00000012421	RIF1	92	69.371	Echinops_telfairi
ENSVPAG00000002162	RIF1	91	93.069	ENSEASG00005023434	RIF1	98	93.069	Equus_asinus_asinus
ENSVPAG00000002162	RIF1	97	92.447	ENSECAG00000012679	RIF1	100	92.447	Equus_caballus
ENSVPAG00000002162	RIF1	68	47.967	ENSELUG00000006826	rif1	61	48.054	Esox_lucius
ENSVPAG00000002162	RIF1	100	80.749	ENSFCAG00000029742	RIF1	100	80.459	Felis_catus
ENSVPAG00000002162	RIF1	69	65.064	ENSFALG00000013874	RIF1	90	65.064	Ficedula_albicollis
ENSVPAG00000002162	RIF1	99	73.083	ENSFDAG00000006538	RIF1	99	72.889	Fukomys_damarensis
ENSVPAG00000002162	RIF1	62	49.103	ENSFHEG00000013721	rif1	65	49.070	Fundulus_heteroclitus
ENSVPAG00000002162	RIF1	53	49.580	ENSGMOG00000003517	rif1	81	49.580	Gadus_morhua
ENSVPAG00000002162	RIF1	78	66.061	ENSGALG00000012484	RIF1	91	66.364	Gallus_gallus
ENSVPAG00000002162	RIF1	70	47.966	ENSGAFG00000017196	rif1	76	50.123	Gambusia_affinis
ENSVPAG00000002162	RIF1	59	54.694	ENSGACG00000008579	rif1	69	54.217	Gasterosteus_aculeatus
ENSVPAG00000002162	RIF1	88	69.670	ENSGAGG00000012595	RIF1	98	70.871	Gopherus_agassizii
ENSVPAG00000002162	RIF1	90	88.857	ENSGGOG00000040178	RIF1	96	88.857	Gorilla_gorilla
ENSVPAG00000002162	RIF1	62	44.886	ENSHBUG00000007125	rif1	54	50.159	Haplochromis_burtoni
ENSVPAG00000002162	RIF1	94	73.083	ENSHGLG00100009807	RIF1	99	73.049	Heterocephalus_glaber_male
ENSVPAG00000002162	RIF1	66	47.731	ENSHCOG00000015943	rif1	62	47.887	Hippocampus_comes
ENSVPAG00000002162	RIF1	62	51.419	ENSIPUG00000021703	rif1	64	51.493	Ictalurus_punctatus
ENSVPAG00000002162	RIF1	100	75.381	ENSSTOG00000020712	RIF1	100	75.411	Ictidomys_tridecemlineatus
ENSVPAG00000002162	RIF1	99	67.849	ENSJJAG00000023000	Rif1	100	67.810	Jaculus_jaculus
ENSVPAG00000002162	RIF1	67	49.681	ENSKMAG00000002852	rif1	72	49.681	Kryptolebias_marmoratus
ENSVPAG00000002162	RIF1	62	50.515	ENSLBEG00000023196	rif1	60	49.923	Labrus_bergylta
ENSVPAG00000002162	RIF1	85	63.284	ENSLACG00000005425	RIF1	89	63.284	Latimeria_chalumnae
ENSVPAG00000002162	RIF1	63	52.006	ENSLOCG00000002657	rif1	83	49.390	Lepisosteus_oculatus
ENSVPAG00000002162	RIF1	99	75.797	ENSLAFG00000009796	RIF1	100	75.797	Loxodonta_africana
ENSVPAG00000002162	RIF1	100	78.284	ENSMFAG00000032233	RIF1	100	78.364	Macaca_fascicularis
ENSVPAG00000002162	RIF1	100	78.364	ENSMMUG00000008611	RIF1	100	78.445	Macaca_mulatta
ENSVPAG00000002162	RIF1	100	78.364	ENSMNEG00000031616	RIF1	100	78.445	Macaca_nemestrina
ENSVPAG00000002162	RIF1	100	78.364	ENSMLEG00000042945	RIF1	100	78.347	Mandrillus_leucophaeus
ENSVPAG00000002162	RIF1	75	47.441	ENSMAMG00000001745	rif1	67	47.853	Mastacembelus_armatus
ENSVPAG00000002162	RIF1	62	50.842	ENSMZEG00005020920	rif1	69	50.842	Maylandia_zebra
ENSVPAG00000002162	RIF1	87	53.014	ENSMGAG00000012732	RIF1	95	53.097	Meleagris_gallopavo
ENSVPAG00000002162	RIF1	94	86.072	ENSMAUG00000013158	Rif1	99	86.072	Mesocricetus_auratus
ENSVPAG00000002162	RIF1	100	80.387	ENSMICG00000046127	RIF1	100	80.226	Microcebus_murinus
ENSVPAG00000002162	RIF1	99	67.621	ENSMOCG00000009381	Rif1	100	67.474	Microtus_ochrogaster
ENSVPAG00000002162	RIF1	67	48.341	ENSMMOG00000006519	rif1	69	48.341	Mola_mola
ENSVPAG00000002162	RIF1	100	58.946	ENSMODG00000003703	RIF1	100	58.669	Monodelphis_domestica
ENSVPAG00000002162	RIF1	64	47.685	ENSMALG00000016759	rif1	74	47.957	Monopterus_albus
ENSVPAG00000002162	RIF1	99	67.460	MGP_CAROLIEiJ_G0023555	Rif1	100	67.487	Mus_caroli
ENSVPAG00000002162	RIF1	99	67.886	ENSMUSG00000036202	Rif1	100	67.913	Mus_musculus
ENSVPAG00000002162	RIF1	99	66.478	MGP_PahariEiJ_G0025006	Rif1	100	66.317	Mus_pahari
ENSVPAG00000002162	RIF1	99	67.942	MGP_SPRETEiJ_G0024476	Rif1	100	67.969	Mus_spretus
ENSVPAG00000002162	RIF1	100	80.371	ENSMPUG00000000371	RIF1	100	80.331	Mustela_putorius_furo
ENSVPAG00000002162	RIF1	90	78.815	ENSMLUG00000003376	RIF1	100	78.591	Myotis_lucifugus
ENSVPAG00000002162	RIF1	100	70.864	ENSNGAG00000009268	Rif1	100	70.776	Nannospalax_galili
ENSVPAG00000002162	RIF1	62	49.480	ENSNBRG00000014257	rif1	68	49.365	Neolamprologus_brichardi
ENSVPAG00000002162	RIF1	100	76.414	ENSNLEG00000010955	RIF1	100	76.685	Nomascus_leucogenys
ENSVPAG00000002162	RIF1	81	77.232	ENSMEUG00000007601	-	87	77.232	Notamacropus_eugenii
ENSVPAG00000002162	RIF1	99	70.346	ENSODEG00000003950	RIF1	99	70.403	Octodon_degus
ENSVPAG00000002162	RIF1	62	44.296	ENSONIG00000013657	rif1	62	47.759	Oreochromis_niloticus
ENSVPAG00000002162	RIF1	73	73.171	ENSOANG00000006078	-	77	73.171	Ornithorhynchus_anatinus
ENSVPAG00000002162	RIF1	100	75.413	ENSOCUG00000017435	RIF1	100	75.282	Oryctolagus_cuniculus
ENSVPAG00000002162	RIF1	64	47.942	ENSORLG00020001302	rif1	70	48.023	Oryzias_latipes_hni
ENSVPAG00000002162	RIF1	62	48.265	ENSORLG00015000009	rif1	67	48.265	Oryzias_latipes_hsok
ENSVPAG00000002162	RIF1	61	47.631	ENSOMEG00000021513	rif1	67	47.653	Oryzias_melastigma
ENSVPAG00000002162	RIF1	99	76.855	ENSOGAG00000006141	RIF1	99	76.746	Otolemur_garnettii
ENSVPAG00000002162	RIF1	100	83.320	ENSOARG00000008930	RIF1	100	83.320	Ovis_aries
ENSVPAG00000002162	RIF1	100	78.051	ENSPPAG00000023754	RIF1	100	78.051	Pan_paniscus
ENSVPAG00000002162	RIF1	100	80.749	ENSPPRG00000003618	RIF1	100	80.830	Panthera_pardus
ENSVPAG00000002162	RIF1	100	80.789	ENSPTIG00000020652	RIF1	100	80.870	Panthera_tigris_altaica
ENSVPAG00000002162	RIF1	100	78.091	ENSPTRG00000012534	RIF1	100	78.091	Pan_troglodytes
ENSVPAG00000002162	RIF1	100	78.284	ENSPANG00000008525	RIF1	100	78.266	Papio_anubis
ENSVPAG00000002162	RIF1	62	51.208	ENSPKIG00000004267	rif1	72	51.399	Paramormyrops_kingsleyae
ENSVPAG00000002162	RIF1	63	46.054	ENSPMGG00000016141	rif1	77	44.847	Periophthalmus_magnuspinnatus
ENSVPAG00000002162	RIF1	99	68.724	ENSPEMG00000000446	Rif1	99	68.507	Peromyscus_maniculatus_bairdii
ENSVPAG00000002162	RIF1	97	66.827	ENSPCIG00000009185	RIF1	99	67.308	Phascolarctos_cinereus
ENSVPAG00000002162	RIF1	68	48.087	ENSPFOG00000017804	rif1	75	48.162	Poecilia_formosa
ENSVPAG00000002162	RIF1	61	47.346	ENSPFOG00000000554	-	70	49.632	Poecilia_formosa
ENSVPAG00000002162	RIF1	68	48.081	ENSPLAG00000017945	rif1	78	48.081	Poecilia_latipinna
ENSVPAG00000002162	RIF1	55	48.188	ENSPMEG00000006897	-	68	48.188	Poecilia_mexicana
ENSVPAG00000002162	RIF1	60	52.513	ENSPREG00000018052	rif1	71	52.424	Poecilia_reticulata
ENSVPAG00000002162	RIF1	100	78.284	ENSPPYG00000012846	RIF1	100	78.445	Pongo_abelii
ENSVPAG00000002162	RIF1	81	85.437	ENSPCAG00000009032	RIF1	81	85.437	Procavia_capensis
ENSVPAG00000002162	RIF1	100	80.233	ENSPCOG00000027888	RIF1	100	80.193	Propithecus_coquereli
ENSVPAG00000002162	RIF1	93	88.235	ENSPVAG00000014276	RIF1	95	88.235	Pteropus_vampyrus
ENSVPAG00000002162	RIF1	62	48.759	ENSPNYG00000012940	rif1	68	48.679	Pundamilia_nyererei
ENSVPAG00000002162	RIF1	99	67.042	ENSRNOG00000054901	Rif1	100	67.082	Rattus_norvegicus
ENSVPAG00000002162	RIF1	100	78.383	ENSRBIG00000003704	RIF1	100	78.577	Rhinopithecus_bieti
ENSVPAG00000002162	RIF1	100	78.082	ENSRROG00000028206	RIF1	100	78.356	Rhinopithecus_roxellana
ENSVPAG00000002162	RIF1	97	82.796	ENSSBOG00000029530	RIF1	100	82.796	Saimiri_boliviensis_boliviensis
ENSVPAG00000002162	RIF1	99	57.983	ENSSHAG00000018552	RIF1	97	61.396	Sarcophilus_harrisii
ENSVPAG00000002162	RIF1	64	50.807	ENSSFOG00015021539	rif1	84	48.418	Scleropages_formosus
ENSVPAG00000002162	RIF1	67	48.556	ENSSMAG00000011704	rif1	65	48.263	Scophthalmus_maximus
ENSVPAG00000002162	RIF1	64	49.597	ENSSDUG00000015632	rif1	74	47.029	Seriola_dumerili
ENSVPAG00000002162	RIF1	60	83.729	ENSSARG00000007161	-	60	83.729	Sorex_araneus
ENSVPAG00000002162	RIF1	91	68.563	ENSSPUG00000003062	RIF1	90	68.563	Sphenodon_punctatus
ENSVPAG00000002162	RIF1	100	83.877	ENSSSCG00000016395	RIF1	100	83.777	Sus_scrofa
ENSVPAG00000002162	RIF1	64	48.377	ENSTRUG00000015808	rif1	70	48.377	Takifugu_rubripes
ENSVPAG00000002162	RIF1	63	48.434	ENSTNIG00000011538	rif1	69	48.434	Tetraodon_nigroviridis
ENSVPAG00000002162	RIF1	82	90.506	ENSTBEG00000016082	RIF1	82	90.506	Tupaia_belangeri
ENSVPAG00000002162	RIF1	100	85.224	ENSTTRG00000011190	RIF1	100	85.224	Tursiops_truncatus
ENSVPAG00000002162	RIF1	90	80.500	ENSUAMG00000026385	RIF1	99	80.340	Ursus_americanus
ENSVPAG00000002162	RIF1	100	81.540	ENSUMAG00000000337	RIF1	100	81.396	Ursus_maritimus
ENSVPAG00000002162	RIF1	100	80.048	ENSVVUG00000011293	RIF1	100	80.048	Vulpes_vulpes
ENSVPAG00000002162	RIF1	83	61.791	ENSXETG00000004530	rif1	84	61.791	Xenopus_tropicalis
ENSVPAG00000002162	RIF1	68	45.400	ENSXMAG00000000506	rif1	72	45.638	Xiphophorus_maculatus