EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000002215 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 18285 bases
Position: chrGeneScaffold_516:458469-476753
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000002050	zf-C2H2	PF00096.26	1.8e-19	1	2
ENSVPAP00000002050	zf-C2H2	PF00096.26	1.8e-19	2	2
ENSVPAP00000002050	zf-met	PF12874.7	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000002215	PRDM4-201	2394	-	ENSVPAP00000002050	797 (aa)	-	UPI00018BDA69

Gene Model

Click here to download ENSVPAG00000002215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000002215's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000002215	PRDM4	100	97.616	ENSG00000110851	PRDM4	99	97.616	Homo_sapiens
ENSVPAG00000002215	PRDM4	100	97.995	ENSAMEG00000016174	PRDM4	99	97.995	Ailuropoda_melanoleuca
ENSVPAG00000002215	PRDM4	100	87.829	ENSAPLG00000009846	PRDM4	99	87.453	Anas_platyrhynchos
ENSVPAG00000002215	PRDM4	100	97.491	ENSANAG00000024800	PRDM4	99	97.491	Aotus_nancymaae
ENSVPAG00000002215	PRDM4	100	98.118	ENSBTAG00000012999	PRDM4	99	98.118	Bos_taurus
ENSVPAG00000002215	PRDM4	100	96.989	ENSCJAG00000015261	PRDM4	99	96.989	Callithrix_jacchus
ENSVPAG00000002215	PRDM4	100	97.992	ENSCAFG00000001788	PRDM4	99	97.992	Canis_familiaris
ENSVPAG00000002215	PRDM4	100	97.992	ENSCAFG00020004916	PRDM4	99	97.992	Canis_lupus_dingo
ENSVPAG00000002215	PRDM4	100	97.992	ENSCHIG00000019409	PRDM4	99	97.992	Capra_hircus
ENSVPAG00000002215	PRDM4	100	97.491	ENSTSYG00000009248	PRDM4	99	97.491	Carlito_syrichta
ENSVPAG00000002215	PRDM4	100	90.989	ENSCAPG00000013937	PRDM4	99	90.989	Cavia_aperea
ENSVPAG00000002215	PRDM4	100	90.435	ENSCPOG00000022385	PRDM4	100	90.435	Cavia_porcellus
ENSVPAG00000002215	PRDM4	100	97.616	ENSCCAG00000036033	PRDM4	99	97.616	Cebus_capucinus
ENSVPAG00000002215	PRDM4	100	97.240	ENSCATG00000044797	PRDM4	99	97.240	Cercocebus_atys
ENSVPAG00000002215	PRDM4	100	92.164	ENSCLAG00000007545	PRDM4	100	92.413	Chinchilla_lanigera
ENSVPAG00000002215	PRDM4	100	97.491	ENSCSAG00000002896	PRDM4	99	97.491	Chlorocebus_sabaeus
ENSVPAG00000002215	PRDM4	77	96.226	ENSCHOG00000001744	PRDM4	85	96.226	Choloepus_hoffmanni
ENSVPAG00000002215	PRDM4	100	88.331	ENSCPBG00000023187	PRDM4	100	88.331	Chrysemys_picta_bellii
ENSVPAG00000002215	PRDM4	100	97.365	ENSCANG00000021804	PRDM4	99	97.365	Colobus_angolensis_palliatus
ENSVPAG00000002215	PRDM4	100	93.035	ENSCGRG00001015102	-	100	92.662	Cricetulus_griseus_chok1gshd
ENSVPAG00000002215	PRDM4	96	93.032	ENSCGRG00000004044	-	100	92.645	Cricetulus_griseus_crigri
ENSVPAG00000002215	PRDM4	100	96.612	ENSDNOG00000032478	PRDM4	99	96.830	Dasypus_novemcinctus
ENSVPAG00000002215	PRDM4	100	81.430	ENSDORG00000015081	-	100	81.556	Dipodomys_ordii
ENSVPAG00000002215	PRDM4	94	45.710	ENSEBUG00000003775	prdm4	99	45.920	Eptatretus_burgeri
ENSVPAG00000002215	PRDM4	100	97.992	ENSECAG00000015423	PRDM4	100	97.811	Equus_caballus
ENSVPAG00000002215	PRDM4	94	93.742	ENSEEUG00000006569	PRDM4	99	93.342	Erinaceus_europaeus
ENSVPAG00000002215	PRDM4	99	60.389	ENSELUG00000015265	prdm4	99	60.267	Esox_lucius
ENSVPAG00000002215	PRDM4	100	98.620	ENSFCAG00000022478	PRDM4	99	98.620	Felis_catus
ENSVPAG00000002215	PRDM4	100	88.206	ENSFALG00000013342	PRDM4	100	87.829	Ficedula_albicollis
ENSVPAG00000002215	PRDM4	100	87.359	ENSGALG00000012619	PRDM4	99	86.984	Gallus_gallus
ENSVPAG00000002215	PRDM4	100	87.955	ENSGAGG00000002763	PRDM4	95	87.955	Gopherus_agassizii
ENSVPAG00000002215	PRDM4	100	97.491	ENSGGOG00000001244	PRDM4	99	97.491	Gorilla_gorilla
ENSVPAG00000002215	PRDM4	100	93.726	ENSHGLG00000004590	PRDM4	98	93.601	Heterocephalus_glaber_female
ENSVPAG00000002215	PRDM4	100	92.671	ENSHGLG00100007464	PRDM4	100	92.547	Heterocephalus_glaber_male
ENSVPAG00000002215	PRDM4	95	60.881	ENSIPUG00000024162	prdm4	93	60.966	Ictalurus_punctatus
ENSVPAG00000002215	PRDM4	100	97.365	ENSSTOG00000016168	PRDM4	99	97.365	Ictidomys_tridecemlineatus
ENSVPAG00000002215	PRDM4	82	92.954	ENSJJAG00000022448	-	100	95.849	Jaculus_jaculus
ENSVPAG00000002215	PRDM4	100	72.772	ENSLACG00000007452	PRDM4	99	73.267	Latimeria_chalumnae
ENSVPAG00000002215	PRDM4	79	41.689	ENSLOCG00000017092	prdm4	100	53.247	Lepisosteus_oculatus
ENSVPAG00000002215	PRDM4	98	97.462	ENSLAFG00000001483	PRDM4	100	97.462	Loxodonta_africana
ENSVPAG00000002215	PRDM4	100	97.616	ENSMFAG00000041862	PRDM4	99	97.616	Macaca_fascicularis
ENSVPAG00000002215	PRDM4	100	97.616	ENSMMUG00000015550	PRDM4	99	97.616	Macaca_mulatta
ENSVPAG00000002215	PRDM4	100	97.365	ENSMNEG00000032319	PRDM4	99	97.365	Macaca_nemestrina
ENSVPAG00000002215	PRDM4	100	97.491	ENSMLEG00000039607	PRDM4	99	97.491	Mandrillus_leucophaeus
ENSVPAG00000002215	PRDM4	100	79.875	ENSMGAG00000012815	PRDM4	100	79.500	Meleagris_gallopavo
ENSVPAG00000002215	PRDM4	100	96.487	ENSMICG00000007807	PRDM4	99	96.487	Microcebus_murinus
ENSVPAG00000002215	PRDM4	100	93.852	ENSMOCG00000000753	Prdm4	99	93.601	Microtus_ochrogaster
ENSVPAG00000002215	PRDM4	100	94.730	ENSMUSG00000035529	Prdm4	100	94.228	Mus_musculus
ENSVPAG00000002215	PRDM4	100	93.726	MGP_PahariEiJ_G0031398	Prdm4	100	93.774	Mus_pahari
ENSVPAG00000002215	PRDM4	100	94.856	MGP_SPRETEiJ_G0016505	Prdm4	100	94.917	Mus_spretus
ENSVPAG00000002215	PRDM4	100	92.135	ENSMPUG00000012238	PRDM4	99	91.386	Mustela_putorius_furo
ENSVPAG00000002215	PRDM4	100	97.616	ENSMLUG00000000767	PRDM4	99	97.616	Myotis_lucifugus
ENSVPAG00000002215	PRDM4	100	95.859	ENSNGAG00000018627	Prdm4	100	95.859	Nannospalax_galili
ENSVPAG00000002215	PRDM4	100	97.491	ENSNLEG00000006748	PRDM4	99	97.491	Nomascus_leucogenys
ENSVPAG00000002215	PRDM4	89	89.671	ENSMEUG00000004495	PRDM4	89	89.671	Notamacropus_eugenii
ENSVPAG00000002215	PRDM4	89	96.726	ENSOPRG00000010192	PRDM4	89	96.726	Ochotona_princeps
ENSVPAG00000002215	PRDM4	100	90.715	ENSODEG00000014750	PRDM4	99	90.841	Octodon_degus
ENSVPAG00000002215	PRDM4	100	91.343	ENSOANG00000005526	PRDM4	99	91.343	Ornithorhynchus_anatinus
ENSVPAG00000002215	PRDM4	94	97.282	ENSOCUG00000012859	PRDM4	96	97.282	Oryctolagus_cuniculus
ENSVPAG00000002215	PRDM4	100	97.616	ENSOGAG00000011945	PRDM4	100	97.616	Otolemur_garnettii
ENSVPAG00000002215	PRDM4	100	97.742	ENSOARG00000017955	PRDM4	99	97.742	Ovis_aries
ENSVPAG00000002215	PRDM4	100	97.616	ENSPPAG00000038438	PRDM4	99	97.616	Pan_paniscus
ENSVPAG00000002215	PRDM4	100	98.620	ENSPPRG00000004144	PRDM4	99	98.620	Panthera_pardus
ENSVPAG00000002215	PRDM4	100	98.620	ENSPTIG00000005847	PRDM4	99	98.620	Panthera_tigris_altaica
ENSVPAG00000002215	PRDM4	100	97.616	ENSPTRG00000005400	PRDM4	99	97.616	Pan_troglodytes
ENSVPAG00000002215	PRDM4	100	97.616	ENSPANG00000022084	PRDM4	99	97.616	Papio_anubis
ENSVPAG00000002215	PRDM4	99	60.333	ENSPKIG00000000875	prdm4	99	60.451	Paramormyrops_kingsleyae
ENSVPAG00000002215	PRDM4	91	82.890	ENSPSIG00000012066	PRDM4	100	82.890	Pelodiscus_sinensis
ENSVPAG00000002215	PRDM4	100	95.358	ENSPEMG00000014598	Prdm4	100	95.358	Peromyscus_maniculatus_bairdii
ENSVPAG00000002215	PRDM4	100	89.000	ENSPCIG00000009471	PRDM4	99	89.000	Phascolarctos_cinereus
ENSVPAG00000002215	PRDM4	100	97.491	ENSPPYG00000004913	PRDM4	99	97.491	Pongo_abelii
ENSVPAG00000002215	PRDM4	83	97.727	ENSPCAG00000009987	PRDM4	83	97.727	Procavia_capensis
ENSVPAG00000002215	PRDM4	100	96.487	ENSPCOG00000021060	PRDM4	99	96.487	Propithecus_coquereli
ENSVPAG00000002215	PRDM4	100	97.368	ENSPVAG00000001596	PRDM4	99	97.368	Pteropus_vampyrus
ENSVPAG00000002215	PRDM4	100	94.110	ENSRNOG00000004962	Prdm4	100	93.734	Rattus_norvegicus
ENSVPAG00000002215	PRDM4	100	97.365	ENSRBIG00000035488	PRDM4	99	97.365	Rhinopithecus_bieti
ENSVPAG00000002215	PRDM4	100	97.491	ENSRROG00000012779	PRDM4	99	97.491	Rhinopithecus_roxellana
ENSVPAG00000002215	PRDM4	100	97.491	ENSSBOG00000000403	PRDM4	99	97.491	Saimiri_boliviensis_boliviensis
ENSVPAG00000002215	PRDM4	99	63.625	ENSSFOG00015023358	prdm4	98	63.872	Scleropages_formosus
ENSVPAG00000002215	PRDM4	100	98.494	ENSSSCG00000000160	PRDM4	99	98.494	Sus_scrofa
ENSVPAG00000002215	PRDM4	100	88.331	ENSTGUG00000010962	-	99	87.955	Taeniopygia_guttata
ENSVPAG00000002215	PRDM4	74	90.444	ENSTBEG00000001732	PRDM4	84	90.444	Tupaia_belangeri
ENSVPAG00000002215	PRDM4	100	97.867	ENSTTRG00000011056	PRDM4	99	97.867	Tursiops_truncatus
ENSVPAG00000002215	PRDM4	100	98.369	ENSUAMG00000022796	PRDM4	99	98.369	Ursus_americanus
ENSVPAG00000002215	PRDM4	100	98.369	ENSUMAG00000017231	PRDM4	99	98.369	Ursus_maritimus
ENSVPAG00000002215	PRDM4	100	97.992	ENSVVUG00000023397	PRDM4	99	97.992	Vulpes_vulpes