EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000002422 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: HNRPDL|JKTBP|laAUF1
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 2876 bases
Position: chrGeneScaffold_2058:29461-32336
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000002237	RRM_1	PF00076.22	2.1e-22	1	2
ENSVPAP00000002237	RRM_1	PF00076.22	2.1e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000002422	-	813	-	ENSVPAP00000002237	271 (aa)	-	UPI00018BD842

Gene Model

Click here to download ENSVPAG00000002422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000002422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000002422	-	78	56.604	ENSVPAG00000004374	HNRNPD	84	54.505

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000002422	-	100	78.676	ENSG00000152795	HNRNPDL	90	78.676	Homo_sapiens
ENSVPAG00000002422	-	100	59.041	ENSAMEG00000007660	-	89	56.827	Ailuropoda_melanoleuca
ENSVPAG00000002422	-	100	78.676	ENSAMEG00000005145	-	73	78.676	Ailuropoda_melanoleuca
ENSVPAG00000002422	-	100	73.106	ENSAPLG00000011774	HNRNPDL	99	73.106	Anas_platyrhynchos
ENSVPAG00000002422	-	100	72.426	ENSACAG00000010416	HNRNPDL	86	72.426	Anolis_carolinensis
ENSVPAG00000002422	-	100	71.691	ENSANAG00000030316	-	96	62.016	Aotus_nancymaae
ENSVPAG00000002422	-	100	78.676	ENSANAG00000029054	HNRNPDL	65	78.676	Aotus_nancymaae
ENSVPAG00000002422	-	99	75.368	ENSANAG00000038001	-	90	75.368	Aotus_nancymaae
ENSVPAG00000002422	-	100	61.538	ENSANAG00000035255	-	99	60.729	Aotus_nancymaae
ENSVPAG00000002422	-	100	65.314	ENSANAG00000035355	-	90	64.338	Aotus_nancymaae
ENSVPAG00000002422	-	100	55.839	ENSAMXG00000001495	hnrnpdl	72	58.525	Astyanax_mexicanus
ENSVPAG00000002422	-	100	78.676	ENSBTAG00000014804	HNRNPDL	65	78.676	Bos_taurus
ENSVPAG00000002422	-	73	74.747	ENSCJAG00000045227	-	71	74.747	Callithrix_jacchus
ENSVPAG00000002422	-	100	78.676	ENSCJAG00000015197	-	65	78.676	Callithrix_jacchus
ENSVPAG00000002422	-	100	66.790	ENSCAFG00000000776	-	94	66.790	Canis_familiaris
ENSVPAG00000002422	-	100	78.676	ENSCAFG00000008940	HNRNPDL	65	78.676	Canis_familiaris
ENSVPAG00000002422	-	100	78.676	ENSCAFG00020010699	-	65	78.676	Canis_lupus_dingo
ENSVPAG00000002422	-	70	72.105	ENSCHIG00000026667	-	51	72.105	Capra_hircus
ENSVPAG00000002422	-	100	78.676	ENSCHIG00000010260	-	65	78.676	Capra_hircus
ENSVPAG00000002422	-	92	66.265	ENSTSYG00000036907	-	75	62.613	Carlito_syrichta
ENSVPAG00000002422	-	100	77.574	ENSTSYG00000031074	-	100	77.574	Carlito_syrichta
ENSVPAG00000002422	-	99	76.208	ENSCAPG00000015955	-	100	76.208	Cavia_aperea
ENSVPAG00000002422	-	100	78.676	ENSCPOG00000015619	-	67	78.676	Cavia_porcellus
ENSVPAG00000002422	-	61	68.675	ENSCCAG00000020531	-	77	68.675	Cebus_capucinus
ENSVPAG00000002422	-	100	78.676	ENSCCAG00000020777	HNRNPDL	65	78.676	Cebus_capucinus
ENSVPAG00000002422	-	65	72.159	ENSCATG00000030349	-	78	72.159	Cercocebus_atys
ENSVPAG00000002422	-	100	78.676	ENSCATG00000038573	-	69	78.676	Cercocebus_atys
ENSVPAG00000002422	-	100	57.353	ENSCLAG00000010786	-	91	58.088	Chinchilla_lanigera
ENSVPAG00000002422	-	100	78.676	ENSCLAG00000008428	HNRNPDL	65	78.676	Chinchilla_lanigera
ENSVPAG00000002422	-	100	78.676	ENSCSAG00000004461	HNRNPDL	65	78.676	Chlorocebus_sabaeus
ENSVPAG00000002422	-	100	75.735	ENSCHOG00000002938	-	100	75.735	Choloepus_hoffmanni
ENSVPAG00000002422	-	100	74.905	ENSCHOG00000009204	-	100	74.905	Choloepus_hoffmanni
ENSVPAG00000002422	-	100	73.529	ENSCHOG00000003275	-	81	73.529	Choloepus_hoffmanni
ENSVPAG00000002422	-	100	76.471	ENSCHOG00000010831	-	81	76.471	Choloepus_hoffmanni
ENSVPAG00000002422	-	100	77.574	ENSCHOG00000000160	-	93	77.574	Choloepus_hoffmanni
ENSVPAG00000002422	-	100	73.993	ENSCPBG00000008014	HNRNPDL	90	73.993	Chrysemys_picta_bellii
ENSVPAG00000002422	-	100	78.676	ENSCANG00000020228	-	100	78.676	Colobus_angolensis_palliatus
ENSVPAG00000002422	-	100	78.309	ENSCGRG00001010960	Hnrnpdl	86	78.309	Cricetulus_griseus_chok1gshd
ENSVPAG00000002422	-	100	78.309	ENSCGRG00000011361	-	96	78.309	Cricetulus_griseus_crigri
ENSVPAG00000002422	-	100	55.147	ENSDARG00000003429	hnrnpdl	74	60.268	Danio_rerio
ENSVPAG00000002422	-	100	77.941	ENSDNOG00000003887	-	65	77.941	Dasypus_novemcinctus
ENSVPAG00000002422	-	100	75.000	ENSDNOG00000018280	-	88	75.000	Dasypus_novemcinctus
ENSVPAG00000002422	-	97	73.864	ENSDNOG00000033760	-	85	73.864	Dasypus_novemcinctus
ENSVPAG00000002422	-	80	70.507	ENSDNOG00000033765	-	87	70.507	Dasypus_novemcinctus
ENSVPAG00000002422	-	61	57.616	ENSDNOG00000046422	-	83	57.237	Dasypus_novemcinctus
ENSVPAG00000002422	-	100	71.324	ENSDORG00000024157	-	90	72.794	Dipodomys_ordii
ENSVPAG00000002422	-	100	78.676	ENSDORG00000000968	-	65	78.676	Dipodomys_ordii
ENSVPAG00000002422	-	85	48.069	ENSETEG00000010820	-	77	48.352	Echinops_telfairi
ENSVPAG00000002422	-	92	43.678	ENSEASG00005012961	-	62	66.972	Equus_asinus_asinus
ENSVPAG00000002422	-	100	78.676	ENSEASG00005016276	-	65	78.676	Equus_asinus_asinus
ENSVPAG00000002422	-	100	78.676	ENSECAG00000022692	HNRNPDL	68	78.676	Equus_caballus
ENSVPAG00000002422	-	92	43.373	ENSECAG00000040564	-	70	45.070	Equus_caballus
ENSVPAG00000002422	-	100	78.676	ENSEEUG00000004301	-	65	78.676	Erinaceus_europaeus
ENSVPAG00000002422	-	100	59.926	ENSELUG00000003241	hnrnpdl	72	62.212	Esox_lucius
ENSVPAG00000002422	-	100	78.676	ENSFCAG00000000455	HNRNPDL	65	78.676	Felis_catus
ENSVPAG00000002422	-	100	73.529	ENSFALG00000005709	HNRNPDL	90	73.529	Ficedula_albicollis
ENSVPAG00000002422	-	100	78.676	ENSFDAG00000000851	-	99	78.676	Fukomys_damarensis
ENSVPAG00000002422	-	100	73.897	ENSGALG00000023199	HNRNPDL	90	73.897	Gallus_gallus
ENSVPAG00000002422	-	100	73.993	ENSGAGG00000003646	HNRNPDL	90	73.993	Gopherus_agassizii
ENSVPAG00000002422	-	100	78.676	ENSGGOG00000003714	HNRNPDL	65	78.676	Gorilla_gorilla
ENSVPAG00000002422	-	69	73.936	ENSHGLG00000014427	-	81	73.333	Heterocephalus_glaber_female
ENSVPAG00000002422	-	92	77.912	ENSHGLG00000013420	-	74	76.126	Heterocephalus_glaber_female
ENSVPAG00000002422	-	100	78.309	ENSHGLG00000015791	HNRNPDL	64	78.309	Heterocephalus_glaber_female
ENSVPAG00000002422	-	79	72.857	ENSHGLG00100019080	-	68	68.571	Heterocephalus_glaber_male
ENSVPAG00000002422	-	100	78.309	ENSHGLG00100005262	HNRNPDL	80	78.309	Heterocephalus_glaber_male
ENSVPAG00000002422	-	100	61.314	ENSHGLG00100016282	-	72	90.588	Heterocephalus_glaber_male
ENSVPAG00000002422	-	100	59.559	ENSHGLG00100010072	-	87	57.353	Heterocephalus_glaber_male
ENSVPAG00000002422	-	100	64.103	ENSHGLG00100017644	-	92	62.637	Heterocephalus_glaber_male
ENSVPAG00000002422	-	100	53.676	ENSIPUG00000024951	hnrnpdl	72	56.682	Ictalurus_punctatus
ENSVPAG00000002422	-	100	78.676	ENSSTOG00000013979	HNRNPDL	65	78.676	Ictidomys_tridecemlineatus
ENSVPAG00000002422	-	100	78.676	ENSJJAG00000021673	Hnrnpdl	64	78.676	Jaculus_jaculus
ENSVPAG00000002422	-	62	70.060	ENSJJAG00000000674	-	59	71.264	Jaculus_jaculus
ENSVPAG00000002422	-	62	55.285	ENSLACG00000003613	HNRNPDL	72	55.285	Latimeria_chalumnae
ENSVPAG00000002422	-	100	59.191	ENSLOCG00000010736	hnrnpdl	90	58.824	Lepisosteus_oculatus
ENSVPAG00000002422	-	100	78.309	ENSLAFG00000008612	HNRNPDL	91	78.309	Loxodonta_africana
ENSVPAG00000002422	-	100	78.676	ENSMFAG00000002275	HNRNPDL	65	78.676	Macaca_fascicularis
ENSVPAG00000002422	-	100	73.148	ENSMMUG00000015777	HNRNPDL	100	73.148	Macaca_mulatta
ENSVPAG00000002422	-	100	78.676	ENSMNEG00000045130	HNRNPDL	65	78.676	Macaca_nemestrina
ENSVPAG00000002422	-	100	76.838	ENSMLEG00000014825	-	90	76.838	Mandrillus_leucophaeus
ENSVPAG00000002422	-	100	78.676	ENSMLEG00000041600	HNRNPDL	90	78.676	Mandrillus_leucophaeus
ENSVPAG00000002422	-	100	71.691	ENSMGAG00000008033	HNRNPDL	100	71.691	Meleagris_gallopavo
ENSVPAG00000002422	-	100	77.941	ENSMAUG00000011132	Hnrnpdl	86	77.941	Mesocricetus_auratus
ENSVPAG00000002422	-	66	74.860	ENSMICG00000037040	-	81	74.860	Microcebus_murinus
ENSVPAG00000002422	-	100	78.309	ENSMICG00000001445	-	64	78.309	Microcebus_murinus
ENSVPAG00000002422	-	100	77.941	ENSMOCG00000015928	Hnrnpdl	65	77.941	Microtus_ochrogaster
ENSVPAG00000002422	-	100	78.676	ENSMODG00000011916	-	65	78.676	Monodelphis_domestica
ENSVPAG00000002422	-	62	70.659	ENSMODG00000006825	-	72	71.839	Monodelphis_domestica
ENSVPAG00000002422	-	100	78.309	ENSMUSG00000029328	Hnrnpdl	84	78.309	Mus_musculus
ENSVPAG00000002422	-	100	77.941	MGP_PahariEiJ_G0017226	Hnrnpdl	84	77.941	Mus_pahari
ENSVPAG00000002422	-	100	78.309	MGP_SPRETEiJ_G0028445	Hnrnpdl	84	78.309	Mus_spretus
ENSVPAG00000002422	-	100	77.947	ENSMPUG00000014753	-	99	77.947	Mustela_putorius_furo
ENSVPAG00000002422	-	99	56.489	ENSMPUG00000011188	-	81	57.075	Mustela_putorius_furo
ENSVPAG00000002422	-	100	60.517	ENSMPUG00000006259	-	94	60.517	Mustela_putorius_furo
ENSVPAG00000002422	-	100	76.838	ENSMPUG00000009986	-	83	76.838	Mustela_putorius_furo
ENSVPAG00000002422	-	100	78.676	ENSMLUG00000014452	-	65	78.676	Myotis_lucifugus
ENSVPAG00000002422	-	92	62.249	ENSMLUG00000025989	-	73	59.459	Myotis_lucifugus
ENSVPAG00000002422	-	100	77.574	ENSNGAG00000015740	Hnrnpdl	65	77.574	Nannospalax_galili
ENSVPAG00000002422	-	100	78.676	ENSNLEG00000008636	HNRNPDL	76	74.269	Nomascus_leucogenys
ENSVPAG00000002422	-	100	65.441	ENSMEUG00000010033	HNRNPDL	82	63.235	Notamacropus_eugenii
ENSVPAG00000002422	-	66	75.419	ENSMEUG00000011454	-	74	75.419	Notamacropus_eugenii
ENSVPAG00000002422	-	100	77.574	ENSOPRG00000007178	-	100	77.574	Ochotona_princeps
ENSVPAG00000002422	-	92	80.321	ENSODEG00000000376	-	71	80.321	Octodon_degus
ENSVPAG00000002422	-	92	82.329	ENSODEG00000002106	-	63	82.329	Octodon_degus
ENSVPAG00000002422	-	100	76.471	ENSODEG00000020231	-	77	76.471	Octodon_degus
ENSVPAG00000002422	-	100	77.491	ENSODEG00000003135	-	91	77.491	Octodon_degus
ENSVPAG00000002422	-	100	72.426	ENSODEG00000004187	-	90	72.426	Octodon_degus
ENSVPAG00000002422	-	100	78.598	ENSOANG00000004651	HNRNPDL	100	78.598	Ornithorhynchus_anatinus
ENSVPAG00000002422	-	100	78.676	ENSOCUG00000013805	-	66	78.676	Oryctolagus_cuniculus
ENSVPAG00000002422	-	70	44.444	ENSOCUG00000025252	-	79	63.636	Oryctolagus_cuniculus
ENSVPAG00000002422	-	92	40.726	ENSOGAG00000024995	-	57	46.707	Otolemur_garnettii
ENSVPAG00000002422	-	100	76.103	ENSOGAG00000002501	-	65	76.103	Otolemur_garnettii
ENSVPAG00000002422	-	67	68.132	ENSOGAG00000031703	-	74	68.862	Otolemur_garnettii
ENSVPAG00000002422	-	72	73.214	ENSOARG00000002402	-	64	73.214	Ovis_aries
ENSVPAG00000002422	-	72	75.258	ENSOARG00000011472	-	68	75.258	Ovis_aries
ENSVPAG00000002422	-	100	78.676	ENSOARG00000000824	-	84	78.676	Ovis_aries
ENSVPAG00000002422	-	100	78.676	ENSPPAG00000043177	HNRNPDL	65	78.676	Pan_paniscus
ENSVPAG00000002422	-	100	78.676	ENSPPRG00000013787	HNRNPDL	65	78.676	Panthera_pardus
ENSVPAG00000002422	-	100	78.676	ENSPTIG00000018505	HNRNPDL	90	78.676	Panthera_tigris_altaica
ENSVPAG00000002422	-	100	78.676	ENSPTRG00000016217	HNRNPDL	65	78.676	Pan_troglodytes
ENSVPAG00000002422	-	100	78.676	ENSPANG00000004761	HNRNPDL	65	78.676	Papio_anubis
ENSVPAG00000002422	-	100	59.489	ENSPKIG00000025514	hnrnpdl	72	59.447	Paramormyrops_kingsleyae
ENSVPAG00000002422	-	100	74.359	ENSPSIG00000016746	HNRNPDL	81	74.359	Pelodiscus_sinensis
ENSVPAG00000002422	-	100	77.941	ENSPEMG00000016545	-	92	77.941	Peromyscus_maniculatus_bairdii
ENSVPAG00000002422	-	100	78.676	ENSPCIG00000003089	-	65	78.676	Phascolarctos_cinereus
ENSVPAG00000002422	-	68	59.016	ENSPCIG00000009814	-	62	59.036	Phascolarctos_cinereus
ENSVPAG00000002422	-	100	78.676	ENSPPYG00000014886	HNRNPDL	65	78.676	Pongo_abelii
ENSVPAG00000002422	-	100	78.309	ENSPCAG00000011543	HNRNPDL	65	78.309	Procavia_capensis
ENSVPAG00000002422	-	100	78.309	ENSPCOG00000019831	-	65	78.309	Propithecus_coquereli
ENSVPAG00000002422	-	92	60.643	ENSPNAG00000016380	hnrnpdl	73	59.447	Pygocentrus_nattereri
ENSVPAG00000002422	-	100	76.471	ENSRNOG00000002270	Hnrnpdl	84	76.471	Rattus_norvegicus
ENSVPAG00000002422	-	100	78.676	ENSRBIG00000030310	HNRNPDL	65	78.676	Rhinopithecus_bieti
ENSVPAG00000002422	-	100	78.676	ENSRROG00000034174	HNRNPDL	65	78.676	Rhinopithecus_roxellana
ENSVPAG00000002422	-	98	71.536	ENSSBOG00000020566	-	90	71.536	Saimiri_boliviensis_boliviensis
ENSVPAG00000002422	-	91	61.943	ENSSBOG00000028904	-	99	61.134	Saimiri_boliviensis_boliviensis
ENSVPAG00000002422	-	100	71.691	ENSSBOG00000022627	-	95	71.429	Saimiri_boliviensis_boliviensis
ENSVPAG00000002422	-	100	78.676	ENSSHAG00000013616	-	73	78.676	Sarcophilus_harrisii
ENSVPAG00000002422	-	100	59.191	ENSSFOG00015005893	hnrnpdl	72	61.290	Scleropages_formosus
ENSVPAG00000002422	-	100	70.782	ENSSARG00000009961	-	98	70.782	Sorex_araneus
ENSVPAG00000002422	-	100	72.263	ENSSPUG00000013700	HNRNPDL	90	72.263	Sphenodon_punctatus
ENSVPAG00000002422	-	92	43.874	ENSSSCG00000012473	-	64	42.478	Sus_scrofa
ENSVPAG00000002422	-	100	78.676	ENSSSCG00000037245	-	65	78.676	Sus_scrofa
ENSVPAG00000002422	-	100	73.162	ENSTGUG00000002850	HNRNPDL	100	73.162	Taeniopygia_guttata
ENSVPAG00000002422	-	92	82.329	ENSTBEG00000002817	-	63	82.329	Tupaia_belangeri
ENSVPAG00000002422	-	100	74.265	ENSTTRG00000001793	-	65	74.265	Tursiops_truncatus
ENSVPAG00000002422	-	100	78.676	ENSUAMG00000011358	HNRNPDL	65	78.676	Ursus_americanus
ENSVPAG00000002422	-	100	78.676	ENSUMAG00000008681	HNRNPDL	65	78.676	Ursus_maritimus
ENSVPAG00000002422	-	100	78.676	ENSVVUG00000024653	HNRNPDL	65	78.676	Vulpes_vulpes
ENSVPAG00000002422	-	100	72.563	ENSVVUG00000013596	-	90	72.563	Vulpes_vulpes
ENSVPAG00000002422	-	80	56.593	ENSVVUG00000001421	-	95	56.593	Vulpes_vulpes
ENSVPAG00000002422	-	100	63.370	ENSXETG00000023026	hnrnpdl	91	62.637	Xenopus_tropicalis