EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000002591 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 44720 bases
Position: chrGeneScaffold_1026:362605-407324
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000002394	zf-CCCH	PF00642.24	8.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000002591	RC3H1-201	3369	-	ENSVPAP00000002394	1123 (aa)	-	UPI00018BDDD4

Gene Model

Click here to download ENSVPAG00000002591's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000002591's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000002591	RC3H1	83	83.258	ENSVPAG00000005994	RC3H2	79	83.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000002591	RC3H1	92	98.649	ENSG00000135870	RC3H1	91	98.649	Homo_sapiens
ENSVPAG00000002591	RC3H1	92	98.649	ENSAMEG00000015657	RC3H1	91	98.649	Ailuropoda_melanoleuca
ENSVPAG00000002591	RC3H1	92	97.315	ENSAPLG00000005341	RC3H1	91	97.315	Anas_platyrhynchos
ENSVPAG00000002591	RC3H1	92	96.868	ENSACAG00000015271	RC3H1	91	96.868	Anolis_carolinensis
ENSVPAG00000002591	RC3H1	92	98.649	ENSANAG00000036716	RC3H1	91	98.649	Aotus_nancymaae
ENSVPAG00000002591	RC3H1	92	98.423	ENSBTAG00000052708	RC3H1	91	98.423	Bos_taurus
ENSVPAG00000002591	RC3H1	92	98.649	ENSCJAG00000009106	RC3H1	91	98.649	Callithrix_jacchus
ENSVPAG00000002591	RC3H1	92	98.649	ENSCAFG00000014434	RC3H1	91	98.649	Canis_familiaris
ENSVPAG00000002591	RC3H1	92	98.649	ENSCAFG00020017112	RC3H1	99	97.738	Canis_lupus_dingo
ENSVPAG00000002591	RC3H1	92	98.198	ENSCHIG00000002873	RC3H1	91	98.198	Capra_hircus
ENSVPAG00000002591	RC3H1	92	98.649	ENSTSYG00000003913	RC3H1	91	98.649	Carlito_syrichta
ENSVPAG00000002591	RC3H1	92	97.748	ENSCPOG00000004349	RC3H1	91	97.748	Cavia_porcellus
ENSVPAG00000002591	RC3H1	92	98.649	ENSCCAG00000025652	RC3H1	91	98.649	Cebus_capucinus
ENSVPAG00000002591	RC3H1	92	98.649	ENSCATG00000033497	RC3H1	91	98.649	Cercocebus_atys
ENSVPAG00000002591	RC3H1	92	98.423	ENSCLAG00000011267	RC3H1	91	98.423	Chinchilla_lanigera
ENSVPAG00000002591	RC3H1	88	98.649	ENSCSAG00000011823	RC3H1	77	98.649	Chlorocebus_sabaeus
ENSVPAG00000002591	RC3H1	92	97.748	ENSCPBG00000014670	RC3H1	99	97.748	Chrysemys_picta_bellii
ENSVPAG00000002591	RC3H1	92	98.874	ENSCANG00000032120	RC3H1	91	98.874	Colobus_angolensis_palliatus
ENSVPAG00000002591	RC3H1	92	98.423	ENSCGRG00001020812	Rc3h1	91	98.423	Cricetulus_griseus_chok1gshd
ENSVPAG00000002591	RC3H1	92	98.423	ENSCGRG00000011952	Rc3h1	91	98.423	Cricetulus_griseus_crigri
ENSVPAG00000002591	RC3H1	92	98.423	ENSDORG00000004855	Rc3h1	91	98.423	Dipodomys_ordii
ENSVPAG00000002591	RC3H1	73	98.093	ENSETEG00000012064	RC3H1	78	98.093	Echinops_telfairi
ENSVPAG00000002591	RC3H1	92	98.649	ENSEASG00005017000	RC3H1	91	98.649	Equus_asinus_asinus
ENSVPAG00000002591	RC3H1	92	98.423	ENSECAG00000021208	RC3H1	91	98.423	Equus_caballus
ENSVPAG00000002591	RC3H1	75	98.601	ENSEEUG00000014861	RC3H1	78	98.601	Erinaceus_europaeus
ENSVPAG00000002591	RC3H1	92	98.423	ENSFCAG00000014924	RC3H1	91	98.423	Felis_catus
ENSVPAG00000002591	RC3H1	92	97.973	ENSFALG00000002947	RC3H1	91	97.973	Ficedula_albicollis
ENSVPAG00000002591	RC3H1	92	98.198	ENSFDAG00000013303	RC3H1	91	98.198	Fukomys_damarensis
ENSVPAG00000002591	RC3H1	92	97.748	ENSGALG00000004587	RC3H1	91	97.748	Gallus_gallus
ENSVPAG00000002591	RC3H1	92	97.973	ENSGAGG00000018194	RC3H1	99	97.973	Gopherus_agassizii
ENSVPAG00000002591	RC3H1	92	98.649	ENSGGOG00000005735	RC3H1	91	98.649	Gorilla_gorilla
ENSVPAG00000002591	RC3H1	80	88.500	ENSHGLG00000004183	-	90	88.325	Heterocephalus_glaber_female
ENSVPAG00000002591	RC3H1	92	98.649	ENSHGLG00100008577	RC3H1	91	98.649	Heterocephalus_glaber_male
ENSVPAG00000002591	RC3H1	92	98.423	ENSSTOG00000016033	RC3H1	91	98.423	Ictidomys_tridecemlineatus
ENSVPAG00000002591	RC3H1	92	98.423	ENSJJAG00000018915	Rc3h1	91	98.423	Jaculus_jaculus
ENSVPAG00000002591	RC3H1	89	96.396	ENSLACG00000016186	RC3H1	90	96.396	Latimeria_chalumnae
ENSVPAG00000002591	RC3H1	89	98.649	ENSLAFG00000004367	RC3H1	91	98.649	Loxodonta_africana
ENSVPAG00000002591	RC3H1	92	98.649	ENSMFAG00000033725	RC3H1	91	98.649	Macaca_fascicularis
ENSVPAG00000002591	RC3H1	92	98.649	ENSMMUG00000000630	RC3H1	91	98.649	Macaca_mulatta
ENSVPAG00000002591	RC3H1	92	98.649	ENSMNEG00000035968	RC3H1	91	98.649	Macaca_nemestrina
ENSVPAG00000002591	RC3H1	92	98.649	ENSMLEG00000037455	RC3H1	91	98.649	Mandrillus_leucophaeus
ENSVPAG00000002591	RC3H1	80	98.423	ENSMAUG00000020864	Rc3h1	85	98.423	Mesocricetus_auratus
ENSVPAG00000002591	RC3H1	92	98.649	ENSMICG00000003000	RC3H1	91	98.649	Microcebus_murinus
ENSVPAG00000002591	RC3H1	85	97.275	ENSMOCG00000016587	Rc3h1	89	97.275	Microtus_ochrogaster
ENSVPAG00000002591	RC3H1	92	98.198	ENSMODG00000004289	RC3H1	91	98.198	Monodelphis_domestica
ENSVPAG00000002591	RC3H1	92	98.423	MGP_CAROLIEiJ_G0014756	Rc3h1	91	98.423	Mus_caroli
ENSVPAG00000002591	RC3H1	92	98.423	ENSMUSG00000040423	Rc3h1	91	98.423	Mus_musculus
ENSVPAG00000002591	RC3H1	92	98.423	MGP_PahariEiJ_G0027992	Rc3h1	91	98.423	Mus_pahari
ENSVPAG00000002591	RC3H1	92	98.423	MGP_SPRETEiJ_G0015563	Rc3h1	91	98.423	Mus_spretus
ENSVPAG00000002591	RC3H1	92	98.423	ENSMPUG00000004747	RC3H1	91	98.423	Mustela_putorius_furo
ENSVPAG00000002591	RC3H1	92	98.423	ENSMLUG00000011127	RC3H1	91	98.423	Myotis_lucifugus
ENSVPAG00000002591	RC3H1	92	98.423	ENSNGAG00000011135	Rc3h1	91	98.423	Nannospalax_galili
ENSVPAG00000002591	RC3H1	92	98.649	ENSNLEG00000015327	RC3H1	91	98.649	Nomascus_leucogenys
ENSVPAG00000002591	RC3H1	91	82.572	ENSOPRG00000013068	RC3H1	91	82.910	Ochotona_princeps
ENSVPAG00000002591	RC3H1	92	98.649	ENSODEG00000014185	RC3H1	91	98.649	Octodon_degus
ENSVPAG00000002591	RC3H1	92	97.973	ENSOANG00000000924	RC3H1	92	97.973	Ornithorhynchus_anatinus
ENSVPAG00000002591	RC3H1	90	98.649	ENSOCUG00000004930	RC3H1	90	98.649	Oryctolagus_cuniculus
ENSVPAG00000002591	RC3H1	92	94.755	ENSOGAG00000004044	RC3H1	91	94.755	Otolemur_garnettii
ENSVPAG00000002591	RC3H1	92	98.423	ENSOARG00000013011	RC3H1	91	98.423	Ovis_aries
ENSVPAG00000002591	RC3H1	92	98.649	ENSPPAG00000039253	RC3H1	91	98.649	Pan_paniscus
ENSVPAG00000002591	RC3H1	92	98.649	ENSPPRG00000009007	RC3H1	91	98.649	Panthera_pardus
ENSVPAG00000002591	RC3H1	92	98.649	ENSPTIG00000015326	RC3H1	91	98.649	Panthera_tigris_altaica
ENSVPAG00000002591	RC3H1	92	98.649	ENSPTRG00000001702	RC3H1	91	98.649	Pan_troglodytes
ENSVPAG00000002591	RC3H1	92	98.649	ENSPANG00000008886	RC3H1	91	98.649	Papio_anubis
ENSVPAG00000002591	RC3H1	92	97.748	ENSPSIG00000016181	RC3H1	92	97.748	Pelodiscus_sinensis
ENSVPAG00000002591	RC3H1	92	98.423	ENSPEMG00000011966	Rc3h1	91	98.423	Peromyscus_maniculatus_bairdii
ENSVPAG00000002591	RC3H1	64	98.198	ENSPCIG00000002058	RC3H1	94	97.511	Phascolarctos_cinereus
ENSVPAG00000002591	RC3H1	92	98.649	ENSPPYG00000000490	RC3H1	91	98.649	Pongo_abelii
ENSVPAG00000002591	RC3H1	72	97.872	ENSPCAG00000010775	RC3H1	78	97.872	Procavia_capensis
ENSVPAG00000002591	RC3H1	74	98.785	ENSPCOG00000021795	RC3H1	86	98.785	Propithecus_coquereli
ENSVPAG00000002591	RC3H1	86	100.000	ENSPVAG00000007593	RC3H1	86	100.000	Pteropus_vampyrus
ENSVPAG00000002591	RC3H1	89	90.766	ENSPNAG00000023439	rc3h1a	95	90.950	Pygocentrus_nattereri
ENSVPAG00000002591	RC3H1	92	98.649	ENSRBIG00000037743	RC3H1	91	98.649	Rhinopithecus_bieti
ENSVPAG00000002591	RC3H1	92	98.649	ENSRROG00000036546	RC3H1	91	98.649	Rhinopithecus_roxellana
ENSVPAG00000002591	RC3H1	85	98.365	ENSSBOG00000010664	RC3H1	90	98.365	Saimiri_boliviensis_boliviensis
ENSVPAG00000002591	RC3H1	92	98.198	ENSSHAG00000007589	RC3H1	91	98.198	Sarcophilus_harrisii
ENSVPAG00000002591	RC3H1	87	86.036	ENSSARG00000004660	RC3H1	86	86.036	Sorex_araneus
ENSVPAG00000002591	RC3H1	92	88.739	ENSSPUG00000018472	RC3H1	91	88.739	Sphenodon_punctatus
ENSVPAG00000002591	RC3H1	92	98.649	ENSSSCG00000015498	RC3H1	91	98.649	Sus_scrofa
ENSVPAG00000002591	RC3H1	92	97.748	ENSTGUG00000004090	RC3H1	91	97.748	Taeniopygia_guttata
ENSVPAG00000002591	RC3H1	80	98.649	ENSTBEG00000005015	RC3H1	80	98.649	Tupaia_belangeri
ENSVPAG00000002591	RC3H1	92	98.423	ENSTTRG00000008572	RC3H1	91	98.423	Tursiops_truncatus
ENSVPAG00000002591	RC3H1	91	98.649	ENSUAMG00000019525	RC3H1	92	98.649	Ursus_americanus
ENSVPAG00000002591	RC3H1	92	98.649	ENSUMAG00000020087	RC3H1	91	98.649	Ursus_maritimus
ENSVPAG00000002591	RC3H1	92	98.649	ENSVVUG00000014201	RC3H1	91	98.649	Vulpes_vulpes
ENSVPAG00000002591	RC3H1	92	96.429	ENSXETG00000020030	rc3h1	92	96.429	Xenopus_tropicalis