EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000002698 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 1100 bases
Position: chrscaffold_38695:9-1108
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	1	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	2	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	3	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	4	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	5	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	6	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	7	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	8	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	9	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	10	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	11	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	12	13
ENSVPAP00000002495	zf-C2H2	PF00096.26	6.4e-84	13	13
ENSVPAP00000002495	zf-met	PF12874.7	4.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000002697	-	1080	-	ENSVPAP00000002495	359 (aa)	-	UPI00018BC321

Gene Model

Click here to download ENSVPAG00000002698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000002698's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000002698	-	99	35.146	ENSVPAG00000004995	GTF3A	80	34.979
ENSVPAG00000002698	-	100	52.511	ENSVPAG00000003027	ZFP69B	80	52.511
ENSVPAG00000002698	-	99	33.499	ENSVPAG00000007435	PRDM5	74	33.499
ENSVPAG00000002698	-	100	50.000	ENSVPAG00000006418	ZNF596	80	47.917
ENSVPAG00000002698	-	100	55.287	ENSVPAG00000000139	ZNF235	65	55.287
ENSVPAG00000002698	-	100	50.838	ENSVPAG00000000904	ZNF132	95	50.838
ENSVPAG00000002698	-	100	55.357	ENSVPAG00000007465	ZNF233	69	55.357
ENSVPAG00000002698	-	99	47.765	ENSVPAG00000009652	-	84	47.765
ENSVPAG00000002698	-	99	58.188	ENSVPAG00000011869	ZNF345	89	58.188
ENSVPAG00000002698	-	99	55.410	ENSVPAG00000011867	-	89	55.410
ENSVPAG00000002698	-	100	47.826	ENSVPAG00000002606	-	60	47.826
ENSVPAG00000002698	-	100	54.955	ENSVPAG00000012526	ZFP1	89	54.955
ENSVPAG00000002698	-	99	55.000	ENSVPAG00000010456	ZNF768	66	55.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000002698	-	99	51.389	ENSAPLG00000012660	-	81	51.389	Anas_platyrhynchos
ENSVPAG00000002698	-	99	59.273	ENSAMXG00000011804	-	86	59.273	Astyanax_mexicanus
ENSVPAG00000002698	-	100	57.655	ENSAMXG00000038453	-	82	57.655	Astyanax_mexicanus
ENSVPAG00000002698	-	99	54.775	ENSAMXG00000026144	-	91	54.775	Astyanax_mexicanus
ENSVPAG00000002698	-	100	57.143	ENSAMXG00000026142	-	89	57.143	Astyanax_mexicanus
ENSVPAG00000002698	-	99	60.767	ENSAMXG00000025455	-	99	60.767	Astyanax_mexicanus
ENSVPAG00000002698	-	99	61.441	ENSAMXG00000037703	-	84	61.441	Astyanax_mexicanus
ENSVPAG00000002698	-	100	52.603	ENSAMXG00000037143	-	95	52.603	Astyanax_mexicanus
ENSVPAG00000002698	-	99	59.028	ENSAMXG00000035690	-	80	59.028	Astyanax_mexicanus
ENSVPAG00000002698	-	99	56.497	ENSAMXG00000043978	-	86	56.497	Astyanax_mexicanus
ENSVPAG00000002698	-	99	55.947	ENSAMXG00000004610	-	96	55.947	Astyanax_mexicanus
ENSVPAG00000002698	-	99	54.183	ENSAMXG00000037326	-	92	54.183	Astyanax_mexicanus
ENSVPAG00000002698	-	99	57.527	ENSAMXG00000019489	-	93	57.527	Astyanax_mexicanus
ENSVPAG00000002698	-	99	57.821	ENSAMXG00000040212	-	90	57.821	Astyanax_mexicanus
ENSVPAG00000002698	-	99	57.576	ENSAMXG00000041725	-	91	57.576	Astyanax_mexicanus
ENSVPAG00000002698	-	99	61.745	ENSAMXG00000029878	-	92	61.745	Astyanax_mexicanus
ENSVPAG00000002698	-	100	56.145	ENSAMXG00000039752	-	88	56.145	Astyanax_mexicanus
ENSVPAG00000002698	-	99	59.447	ENSAMXG00000031489	-	91	59.447	Astyanax_mexicanus
ENSVPAG00000002698	-	100	56.698	ENSAMXG00000001626	-	95	56.698	Astyanax_mexicanus
ENSVPAG00000002698	-	99	56.193	ENSAMXG00000032619	-	96	56.193	Astyanax_mexicanus
ENSVPAG00000002698	-	99	56.296	ENSAMXG00000003002	-	96	56.296	Astyanax_mexicanus
ENSVPAG00000002698	-	99	65.347	ENSAMXG00000033124	-	57	65.347	Astyanax_mexicanus
ENSVPAG00000002698	-	99	73.057	ENSEASG00005020341	-	95	77.374	Equus_asinus_asinus
ENSVPAG00000002698	-	99	73.057	ENSECAG00000017293	-	95	77.374	Equus_caballus
ENSVPAG00000002698	-	99	62.462	ENSECAG00000039445	-	94	62.462	Equus_caballus
ENSVPAG00000002698	-	99	63.386	ENSGAGG00000009739	-	99	63.386	Gopherus_agassizii
ENSVPAG00000002698	-	100	61.453	ENSGAGG00000006960	-	80	62.353	Gopherus_agassizii
ENSVPAG00000002698	-	99	62.011	ENSGAGG00000019349	-	78	62.011	Gopherus_agassizii
ENSVPAG00000002698	-	99	63.243	ENSGAGG00000004740	-	89	63.243	Gopherus_agassizii
ENSVPAG00000002698	-	99	62.824	ENSGAGG00000008773	-	86	62.824	Gopherus_agassizii
ENSVPAG00000002698	-	99	58.478	ENSGAGG00000015451	-	83	58.478	Gopherus_agassizii
ENSVPAG00000002698	-	100	60.484	ENSGAGG00000011574	-	78	60.484	Gopherus_agassizii
ENSVPAG00000002698	-	99	69.718	ENSGAGG00000006683	-	96	69.718	Gopherus_agassizii
ENSVPAG00000002698	-	100	65.000	ENSGAGG00000017986	-	91	64.062	Gopherus_agassizii
ENSVPAG00000002698	-	100	59.127	ENSGAGG00000000971	-	91	59.127	Gopherus_agassizii
ENSVPAG00000002698	-	99	55.422	ENSIPUG00000015177	-	66	55.422	Ictalurus_punctatus
ENSVPAG00000002698	-	99	56.354	ENSIPUG00000015400	-	95	56.354	Ictalurus_punctatus
ENSVPAG00000002698	-	99	64.525	ENSMPUG00000008437	-	89	64.525	Mustela_putorius_furo
ENSVPAG00000002698	-	99	91.000	ENSPTIG00000009259	-	97	91.000	Panthera_tigris_altaica
ENSVPAG00000002698	-	100	59.583	ENSPSIG00000016247	-	53	59.583	Pelodiscus_sinensis
ENSVPAG00000002698	-	99	54.730	ENSPNAG00000012366	-	87	54.730	Pygocentrus_nattereri
ENSVPAG00000002698	-	100	55.085	ENSPNAG00000028765	-	85	55.085	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	56.704	ENSPNAG00000017479	-	86	56.704	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	58.188	ENSPNAG00000008653	-	96	58.188	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	57.083	ENSPNAG00000003919	-	96	57.083	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	60.392	ENSPNAG00000018437	-	81	60.392	Pygocentrus_nattereri
ENSVPAG00000002698	-	100	56.654	ENSPNAG00000002287	-	88	56.654	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	58.475	ENSPNAG00000003526	-	82	58.475	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	58.475	ENSPNAG00000005914	-	72	58.475	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	58.744	ENSPNAG00000016025	-	95	58.744	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	59.072	ENSPNAG00000012138	-	94	59.072	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	50.000	ENSPNAG00000029386	-	89	50.000	Pygocentrus_nattereri
ENSVPAG00000002698	-	100	56.932	ENSPNAG00000000783	-	89	55.024	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	56.471	ENSPNAG00000021942	-	91	56.471	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	57.312	ENSPNAG00000024704	-	93	57.312	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	59.498	ENSPNAG00000016045	-	71	59.498	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	61.513	ENSPNAG00000018471	-	83	61.513	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	55.085	ENSPNAG00000017455	-	82	55.085	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	58.547	ENSPNAG00000007072	-	97	58.547	Pygocentrus_nattereri
ENSVPAG00000002698	-	99	65.672	ENSUAMG00000027384	-	87	64.072	Ursus_americanus
ENSVPAG00000002698	-	99	63.402	ENSUAMG00000027415	-	85	63.402	Ursus_americanus