EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSVPAG00000002716 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Vicugna_pacos
Status
putative
Strand
Minus strand
Length
212101 bases
Position
chrGeneScaffold_1542:544428-756528
Accession
9907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVPAP00000002513RRM_1PF00076.222.1e-3312
ENSVPAP00000002513RRM_1PF00076.222.1e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVPAT00000002716RBMS1-2011137-ENSVPAP00000002513379 (aa)-UPI00018BE930
Gene Model
Click here to download ENSVPAG00000002716's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000002716's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSVPAG00000002716RBMS18664.327ENSVPAG00000003842RBMS38264.327
ENSVPAG00000002716RBMS18673.952ENSVPAG00000004022RBMS28773.810
ENSVPAG00000002716RBMS15237.674ENSVPAG00000005109ELAVL26537.056
ENSVPAG00000002716RBMS15833.871ENSVPAG00000011606ELAVL46835.266
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVPAG00000002716RBMS110097.113ENSG00000153250RBMS110098.425Homo_sapiens
ENSVPAG00000002716RBMS18568.111ENSAPOG00000013761rbms1a8468.323Acanthochromis_polyacanthus
ENSVPAG00000002716RBMS18781.402ENSAPOG00000024437-8875.740Acanthochromis_polyacanthus
ENSVPAG00000002716RBMS19495.568ENSAMEG00000012661RBMS19395.568Ailuropoda_melanoleuca
ENSVPAG00000002716RBMS17965.333ENSACIG00000000113rbms1a8165.552Amphilophus_citrinellus
ENSVPAG00000002716RBMS19380.627ENSACIG00000021498RBMS18880.627Amphilophus_citrinellus
ENSVPAG00000002716RBMS19381.972ENSAOCG00000014482-8981.972Amphiprion_ocellaris
ENSVPAG00000002716RBMS18568.421ENSAOCG00000010066rbms1a8468.634Amphiprion_ocellaris
ENSVPAG00000002716RBMS19381.408ENSAPEG00000018371-8981.408Amphiprion_percula
ENSVPAG00000002716RBMS18568.421ENSAPEG00000023563rbms1a8468.634Amphiprion_percula
ENSVPAG00000002716RBMS19576.731ENSATEG00000018573RBMS19176.177Anabas_testudineus
ENSVPAG00000002716RBMS18568.224ENSATEG00000015450rbms1a8468.438Anabas_testudineus
ENSVPAG00000002716RBMS19592.778ENSAPLG00000007282RBMS19491.421Anas_platyrhynchos
ENSVPAG00000002716RBMS19592.798ENSACAG00000011984RBMS17590.859Anolis_carolinensis
ENSVPAG00000002716RBMS17898.316ENSANAG00000024424RBMS19298.316Aotus_nancymaae
ENSVPAG00000002716RBMS18567.492ENSACLG00000021512rbms1a8567.702Astatotilapia_calliptera
ENSVPAG00000002716RBMS19577.716ENSACLG00000013048RBMS19377.716Astatotilapia_calliptera
ENSVPAG00000002716RBMS19975.926ENSAMXG00000009969RBMS19475.462Astyanax_mexicanus
ENSVPAG00000002716RBMS18676.453ENSAMXG00000002146rbms1a8276.453Astyanax_mexicanus
ENSVPAG00000002716RBMS110093.451ENSBTAG00000005180RBMS19493.451Bos_taurus
ENSVPAG00000002716RBMS110096.850ENSCJAG00000014861-9496.850Callithrix_jacchus
ENSVPAG00000002716RBMS19190.698ENSCJAG00000022465-9289.944Callithrix_jacchus
ENSVPAG00000002716RBMS19990.451ENSCJAG00000012871-9394.302Callithrix_jacchus
ENSVPAG00000002716RBMS19597.493ENSCAFG00000009922RBMS18997.493Canis_familiaris
ENSVPAG00000002716RBMS110095.801ENSCAFG00020006120RBMS19495.801Canis_lupus_dingo
ENSVPAG00000002716RBMS110096.588ENSCHIG00000023380RBMS19496.588Capra_hircus
ENSVPAG00000002716RBMS110097.375ENSTSYG00000005584RBMS19497.375Carlito_syrichta
ENSVPAG00000002716RBMS110096.063ENSCPOG00000012310RBMS19496.063Cavia_porcellus
ENSVPAG00000002716RBMS110096.850ENSCCAG00000033841RBMS19496.850Cebus_capucinus
ENSVPAG00000002716RBMS110097.375ENSCATG00000043032RBMS19398.880Cercocebus_atys
ENSVPAG00000002716RBMS110096.063ENSCLAG00000003031RBMS19496.063Chinchilla_lanigera
ENSVPAG00000002716RBMS110097.375ENSCSAG00000015687RBMS19497.375Chlorocebus_sabaeus
ENSVPAG00000002716RBMS15898.837ENSCHOG00000001579RBMS17398.837Choloepus_hoffmanni
ENSVPAG00000002716RBMS110091.864ENSCPBG00000026455RBMS19492.913Chrysemys_picta_bellii
ENSVPAG00000002716RBMS110097.375ENSCANG00000042152RBMS19497.375Colobus_angolensis_palliatus
ENSVPAG00000002716RBMS110095.276ENSCGRG00001022833Rbms19495.276Cricetulus_griseus_chok1gshd
ENSVPAG00000002716RBMS110095.276ENSCGRG00000008824Rbms19495.276Cricetulus_griseus_crigri
ENSVPAG00000002716RBMS19475.967ENSCSEG00000010652RBMS18876.758Cynoglossus_semilaevis
ENSVPAG00000002716RBMS18565.421ENSCSEG00000000889rbms1a8465.625Cynoglossus_semilaevis
ENSVPAG00000002716RBMS19376.353ENSCVAG00000002027RBMS18977.982Cyprinodon_variegatus
ENSVPAG00000002716RBMS18468.239ENSCVAG00000014698rbms1a8368.454Cyprinodon_variegatus
ENSVPAG00000002716RBMS18675.535ENSDARG00000074023rbms1a8175.535Danio_rerio
ENSVPAG00000002716RBMS19293.681ENSDNOG00000040691RBMS19493.681Dasypus_novemcinctus
ENSVPAG00000002716RBMS110095.013ENSDORG00000007103Rbms19496.063Dipodomys_ordii
ENSVPAG00000002716RBMS19485.674ENSETEG00000012135RBMS19385.674Echinops_telfairi
ENSVPAG00000002716RBMS110093.199ENSEASG00005023132RBMS19493.199Equus_asinus_asinus
ENSVPAG00000002716RBMS110097.113ENSECAG00000019894RBMS19497.113Equus_caballus
ENSVPAG00000002716RBMS17894.175ENSEEUG00000005628RBMS17394.175Erinaceus_europaeus
ENSVPAG00000002716RBMS19069.679ENSELUG00000018923rbms1a8971.605Esox_lucius
ENSVPAG00000002716RBMS19372.394ENSELUG00000019328RBMS18872.394Esox_lucius
ENSVPAG00000002716RBMS110096.588ENSFCAG00000012524RBMS19496.588Felis_catus
ENSVPAG00000002716RBMS18692.661ENSFALG00000004440RBMS18892.661Ficedula_albicollis
ENSVPAG00000002716RBMS110096.325ENSFDAG00000015692RBMS19496.325Fukomys_damarensis
ENSVPAG00000002716RBMS18567.802ENSFHEG00000005662rbms1a7981.529Fundulus_heteroclitus
ENSVPAG00000002716RBMS18678.287ENSFHEG00000000720RBMS18378.287Fundulus_heteroclitus
ENSVPAG00000002716RBMS18663.314ENSGMOG00000000525rbms1a9463.314Gadus_morhua
ENSVPAG00000002716RBMS19592.201ENSGALG00000011132RBMS18893.578Gallus_gallus
ENSVPAG00000002716RBMS19475.278ENSGAFG00000007708RBMS18277.370Gambusia_affinis
ENSVPAG00000002716RBMS18967.456ENSGAFG00000011633rbms1a8968.323Gambusia_affinis
ENSVPAG00000002716RBMS18667.278ENSGACG00000015174rbms1a9167.485Gasterosteus_aculeatus
ENSVPAG00000002716RBMS18779.573ENSGACG00000005671RBMS18379.817Gasterosteus_aculeatus
ENSVPAG00000002716RBMS110091.601ENSGAGG00000007866RBMS19492.651Gopherus_agassizii
ENSVPAG00000002716RBMS19595.265ENSGGOG00000043756-8995.265Gorilla_gorilla
ENSVPAG00000002716RBMS19498.596ENSGGOG00000001264RBMS19397.701Gorilla_gorilla
ENSVPAG00000002716RBMS18567.492ENSHBUG00000004802rbms1a8567.702Haplochromis_burtoni
ENSVPAG00000002716RBMS19578.273ENSHBUG00000004516RBMS19478.273Haplochromis_burtoni
ENSVPAG00000002716RBMS110095.538ENSHGLG00000010387RBMS19495.538Heterocephalus_glaber_female
ENSVPAG00000002716RBMS19894.865ENSHGLG00100014105RBMS19294.865Heterocephalus_glaber_male
ENSVPAG00000002716RBMS19277.077ENSHCOG00000016668RBMS19175.000Hippocampus_comes
ENSVPAG00000002716RBMS18866.867ENSHCOG00000020097rbms1a8367.722Hippocampus_comes
ENSVPAG00000002716RBMS19977.719ENSIPUG00000014677RBMS19477.719Ictalurus_punctatus
ENSVPAG00000002716RBMS18676.758ENSIPUG00000010131RBMS18276.758Ictalurus_punctatus
ENSVPAG00000002716RBMS110096.325ENSSTOG00000012501RBMS19496.325Ictidomys_tridecemlineatus
ENSVPAG00000002716RBMS110095.538ENSJJAG00000016543Rbms19495.538Jaculus_jaculus
ENSVPAG00000002716RBMS19381.197ENSKMAG00000013911RBMS18881.197Kryptolebias_marmoratus
ENSVPAG00000002716RBMS18565.944ENSKMAG00000011839-8466.149Kryptolebias_marmoratus
ENSVPAG00000002716RBMS18568.111ENSLBEG00000025962rbms1a8468.323Labrus_bergylta
ENSVPAG00000002716RBMS19578.116ENSLBEG00000005787RBMS19178.116Labrus_bergylta
ENSVPAG00000002716RBMS19583.196ENSLACG00000004324RBMS19379.058Latimeria_chalumnae
ENSVPAG00000002716RBMS19585.278ENSLOCG00000008622rbms1a9185.278Lepisosteus_oculatus
ENSVPAG00000002716RBMS19496.919ENSLAFG00000017217RBMS19396.919Loxodonta_africana
ENSVPAG00000002716RBMS110097.375ENSMFAG00000000274RBMS19398.880Macaca_fascicularis
ENSVPAG00000002716RBMS110097.375ENSMMUG00000016825RBMS19398.880Macaca_mulatta
ENSVPAG00000002716RBMS110097.375ENSMNEG00000039425RBMS19398.880Macaca_nemestrina
ENSVPAG00000002716RBMS19993.915ENSMLEG00000031517RBMS19398.599Mandrillus_leucophaeus
ENSVPAG00000002716RBMS18778.354ENSMAMG00000003159-8678.834Mastacembelus_armatus
ENSVPAG00000002716RBMS18566.044ENSMAMG00000005018rbms1a8466.250Mastacembelus_armatus
ENSVPAG00000002716RBMS18779.268ENSMZEG00005007313RBMS19179.205Maylandia_zebra
ENSVPAG00000002716RBMS18567.492ENSMZEG00005005661rbms1a8567.702Maylandia_zebra
ENSVPAG00000002716RBMS18693.578ENSMGAG00000011054RBMS19292.434Meleagris_gallopavo
ENSVPAG00000002716RBMS110095.276ENSMAUG00000008550Rbms19495.276Mesocricetus_auratus
ENSVPAG00000002716RBMS110096.588ENSMICG00000008325RBMS19398.034Microcebus_murinus
ENSVPAG00000002716RBMS110095.276ENSMOCG00000022617Rbms19495.276Microtus_ochrogaster
ENSVPAG00000002716RBMS17969.103ENSMMOG00000018249rbms1a8169.333Mola_mola
ENSVPAG00000002716RBMS19478.611ENSMMOG00000003707RBMS19178.611Mola_mola
ENSVPAG00000002716RBMS110091.601ENSMODG00000005250RBMS19492.651Monodelphis_domestica
ENSVPAG00000002716RBMS18567.601ENSMALG00000014235rbms1a8467.812Monopterus_albus
ENSVPAG00000002716RBMS18779.573ENSMALG00000015715-8479.817Monopterus_albus
ENSVPAG00000002716RBMS110094.488MGP_CAROLIEiJ_G0023586Rbms19494.488Mus_caroli
ENSVPAG00000002716RBMS110095.013ENSMUSG00000026970Rbms19495.013Mus_musculus
ENSVPAG00000002716RBMS110094.226MGP_PahariEiJ_G0025037Rbms19494.226Mus_pahari
ENSVPAG00000002716RBMS110094.751MGP_SPRETEiJ_G0024508Rbms19494.751Mus_spretus
ENSVPAG00000002716RBMS110091.940ENSMPUG00000000539RBMS19491.940Mustela_putorius_furo
ENSVPAG00000002716RBMS19988.384ENSMLUG00000008762RBMS19488.384Myotis_lucifugus
ENSVPAG00000002716RBMS110095.276ENSNGAG00000013636Rbms19495.276Nannospalax_galili
ENSVPAG00000002716RBMS18067.657ENSNBRG00000020217rbms1a8567.881Neolamprologus_brichardi
ENSVPAG00000002716RBMS18775.610ENSNBRG00000015151RBMS18875.841Neolamprologus_brichardi
ENSVPAG00000002716RBMS110097.113ENSNLEG00000001667RBMS19497.113Nomascus_leucogenys
ENSVPAG00000002716RBMS17880.135ENSMEUG00000000746RBMS19280.135Notamacropus_eugenii
ENSVPAG00000002716RBMS110090.026ENSOPRG00000012431RBMS19490.026Ochotona_princeps
ENSVPAG00000002716RBMS110096.063ENSODEG00000013934RBMS19496.063Octodon_degus
ENSVPAG00000002716RBMS18767.378ENSONIG00000003329rbms1a8368.210Oreochromis_niloticus
ENSVPAG00000002716RBMS19578.552ENSONIG00000008934RBMS19178.552Oreochromis_niloticus
ENSVPAG00000002716RBMS15755.187ENSOANG00000004477-9956.198Ornithorhynchus_anatinus
ENSVPAG00000002716RBMS19494.663ENSOANG00000006166RBMS19094.663Ornithorhynchus_anatinus
ENSVPAG00000002716RBMS19497.479ENSOCUG00000017365RBMS18397.479Oryctolagus_cuniculus
ENSVPAG00000002716RBMS19274.286ENSORLG00000016818RBMS18377.134Oryzias_latipes
ENSVPAG00000002716RBMS18565.635ENSORLG00000003917rbms1a8466.890Oryzias_latipes
ENSVPAG00000002716RBMS19274.000ENSORLG00020022335RBMS18376.829Oryzias_latipes_hni
ENSVPAG00000002716RBMS18964.793ENSORLG00020018663rbms1a8466.555Oryzias_latipes_hni
ENSVPAG00000002716RBMS19274.571ENSORLG00015018208RBMS18377.439Oryzias_latipes_hsok
ENSVPAG00000002716RBMS18565.635ENSORLG00015016556rbms1a8466.890Oryzias_latipes_hsok
ENSVPAG00000002716RBMS19374.221ENSOMEG00000002394RBMS18974.221Oryzias_melastigma
ENSVPAG00000002716RBMS19297.429ENSOGAG00000002900RBMS19397.429Otolemur_garnettii
ENSVPAG00000002716RBMS110096.588ENSOARG00000006870RBMS19496.588Ovis_aries
ENSVPAG00000002716RBMS19498.596ENSPPAG00000040083RBMS19398.319Pan_paniscus
ENSVPAG00000002716RBMS19394.587ENSPPAG00000036520-9294.587Pan_paniscus
ENSVPAG00000002716RBMS110096.588ENSPPRG00000005040RBMS19496.588Panthera_pardus
ENSVPAG00000002716RBMS19498.034ENSPTIG00000021240RBMS19397.126Panthera_tigris_altaica
ENSVPAG00000002716RBMS110097.113ENSPTRG00000052304RBMS19398.319Pan_troglodytes
ENSVPAG00000002716RBMS19992.021ENSPTRG00000039358-9494.737Pan_troglodytes
ENSVPAG00000002716RBMS110096.588ENSPANG00000001383RBMS19398.880Papio_anubis
ENSVPAG00000002716RBMS18780.183ENSPKIG00000012818rbms1a9475.789Paramormyrops_kingsleyae
ENSVPAG00000002716RBMS110078.590ENSPKIG00000001498rbms1a9577.546Paramormyrops_kingsleyae
ENSVPAG00000002716RBMS110090.814ENSPSIG00000010240RBMS19491.864Pelodiscus_sinensis
ENSVPAG00000002716RBMS17967.333ENSPMGG00000004341rbms1a8067.559Periophthalmus_magnuspinnatus
ENSVPAG00000002716RBMS18777.439ENSPMGG00000006310RBMS19367.611Periophthalmus_magnuspinnatus
ENSVPAG00000002716RBMS110095.538ENSPEMG00000009449Rbms19495.538Peromyscus_maniculatus_bairdii
ENSVPAG00000002716RBMS110091.601ENSPCIG00000018405RBMS19492.651Phascolarctos_cinereus
ENSVPAG00000002716RBMS18568.111ENSPFOG00000016116rbms1a8468.323Poecilia_formosa
ENSVPAG00000002716RBMS19378.063ENSPFOG00000017483RBMS18878.063Poecilia_formosa
ENSVPAG00000002716RBMS18568.111ENSPLAG00000013864rbms1a8468.323Poecilia_latipinna
ENSVPAG00000002716RBMS18677.676ENSPLAG00000000920RBMS18277.676Poecilia_latipinna
ENSVPAG00000002716RBMS18568.111ENSPMEG00000016185rbms1a8666.667Poecilia_mexicana
ENSVPAG00000002716RBMS19378.063ENSPMEG00000015838RBMS18878.063Poecilia_mexicana
ENSVPAG00000002716RBMS19377.778ENSPREG00000008146RBMS18877.778Poecilia_reticulata
ENSVPAG00000002716RBMS18568.111ENSPREG00000020161rbms1a8468.323Poecilia_reticulata
ENSVPAG00000002716RBMS110092.947ENSPPYG00000012879-9492.947Pongo_abelii
ENSVPAG00000002716RBMS19397.458ENSPCAG00000009673RBMS18797.458Procavia_capensis
ENSVPAG00000002716RBMS110096.850ENSPCOG00000027294RBMS19496.850Propithecus_coquereli
ENSVPAG00000002716RBMS110082.415ENSPVAG00000010429RBMS19482.940Pteropus_vampyrus
ENSVPAG00000002716RBMS19578.273ENSPNYG00000002643RBMS19178.273Pundamilia_nyererei
ENSVPAG00000002716RBMS19977.249ENSPNAG00000023479RBMS19476.781Pygocentrus_nattereri
ENSVPAG00000002716RBMS18675.841ENSPNAG00000010225rbms1a8275.841Pygocentrus_nattereri
ENSVPAG00000002716RBMS110095.538ENSRNOG00000008482Rbms19495.538Rattus_norvegicus
ENSVPAG00000002716RBMS110097.113ENSRBIG00000044262RBMS19398.324Rhinopithecus_bieti
ENSVPAG00000002716RBMS110093.451ENSRROG00000043108RBMS19398.880Rhinopithecus_roxellana
ENSVPAG00000002716RBMS19298.276ENSSBOG00000034705RBMS19398.276Saimiri_boliviensis_boliviensis
ENSVPAG00000002716RBMS110091.339ENSSHAG00000012271RBMS19492.388Sarcophilus_harrisii
ENSVPAG00000002716RBMS110079.843ENSSFOG00015022929rbms19479.843Scleropages_formosus
ENSVPAG00000002716RBMS18682.263ENSSFOG00015014493rbms1a8784.667Scleropages_formosus
ENSVPAG00000002716RBMS18778.963ENSSMAG00000012152RBMS18779.205Scophthalmus_maximus
ENSVPAG00000002716RBMS18567.913ENSSMAG00000012722rbms1a8968.125Scophthalmus_maximus
ENSVPAG00000002716RBMS18568.536ENSSDUG00000020602rbms1a8968.750Seriola_dumerili
ENSVPAG00000002716RBMS19380.912ENSSDUG00000018803RBMS18980.912Seriola_dumerili
ENSVPAG00000002716RBMS18568.536ENSSLDG00000009495rbms1a8468.750Seriola_lalandi_dorsalis
ENSVPAG00000002716RBMS19380.627ENSSLDG00000016556RBMS18880.627Seriola_lalandi_dorsalis
ENSVPAG00000002716RBMS19371.751ENSSARG00000011085RBMS18771.751Sorex_araneus
ENSVPAG00000002716RBMS18693.884ENSSPUG00000017163RBMS18793.884Sphenodon_punctatus
ENSVPAG00000002716RBMS18567.802ENSSPAG00000005371rbms1a8468.012Stegastes_partitus
ENSVPAG00000002716RBMS19579.778ENSSPAG00000000059RBMS19179.778Stegastes_partitus
ENSVPAG00000002716RBMS110096.325ENSSSCG00000015888RBMS19596.325Sus_scrofa
ENSVPAG00000002716RBMS110090.551ENSTGUG00000006606RBMS19491.601Taeniopygia_guttata
ENSVPAG00000002716RBMS18466.038ENSTRUG00000017155rbms1a8365.938Takifugu_rubripes
ENSVPAG00000002716RBMS18777.744ENSTRUG00000005466-9174.862Takifugu_rubripes
ENSVPAG00000002716RBMS19376.705ENSTNIG00000016496RBMS19079.205Tetraodon_nigroviridis
ENSVPAG00000002716RBMS19263.506ENSTNIG00000009477rbms1a10062.577Tetraodon_nigroviridis
ENSVPAG00000002716RBMS19487.079ENSTBEG00000016156RBMS19387.079Tupaia_belangeri
ENSVPAG00000002716RBMS19498.034ENSTTRG00000011058RBMS19398.034Tursiops_truncatus
ENSVPAG00000002716RBMS110095.276ENSUAMG00000022331RBMS19495.276Ursus_americanus
ENSVPAG00000002716RBMS19496.639ENSUMAG00000008605RBMS19296.639Ursus_maritimus
ENSVPAG00000002716RBMS110091.940ENSVVUG00000018682RBMS19397.414Vulpes_vulpes
ENSVPAG00000002716RBMS19483.799ENSXETG00000016204rbms19382.961Xenopus_tropicalis
ENSVPAG00000002716RBMS18677.982ENSXCOG00000000211RBMS18877.982Xiphophorus_couchianus
ENSVPAG00000002716RBMS18366.456ENSXCOG00000001659rbms1a8666.667Xiphophorus_couchianus
ENSVPAG00000002716RBMS18568.111ENSXMAG00000001802rbms1a8666.667Xiphophorus_maculatus
ENSVPAG00000002716RBMS19378.063ENSXMAG00000011405RBMS18878.063Xiphophorus_maculatus

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