EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000003016 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 2066 bases
Position: chrGeneScaffold_1164:980-3045
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000002787	RRM_1	PF00076.22	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000003014	SRSF6-201	1038	-	ENSVPAP00000002787	345 (aa)	-	UPI00018BC4B2

Gene Model

Click here to download ENSVPAG00000003016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000003016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000003016	SRSF6	74	100.000	ENSG00000124193	SRSF6	75	100.000	Homo_sapiens
ENSVPAG00000003016	SRSF6	83	100.000	ENSAMEG00000003710	SRSF6	83	100.000	Ailuropoda_melanoleuca
ENSVPAG00000003016	SRSF6	74	92.593	ENSACAG00000002061	SRSF6	74	92.593	Anolis_carolinensis
ENSVPAG00000003016	SRSF6	74	100.000	ENSANAG00000024080	SRSF6	75	100.000	Aotus_nancymaae
ENSVPAG00000003016	SRSF6	83	100.000	ENSBTAG00000008527	SRSF6	83	100.000	Bos_taurus
ENSVPAG00000003016	SRSF6	83	100.000	ENSCAFG00000009289	SRSF6	83	100.000	Canis_familiaris
ENSVPAG00000003016	SRSF6	83	100.000	ENSCAFG00020013559	SRSF6	83	100.000	Canis_lupus_dingo
ENSVPAG00000003016	SRSF6	83	100.000	ENSCHIG00000009148	-	83	100.000	Capra_hircus
ENSVPAG00000003016	SRSF6	83	100.000	ENSCHIG00000015890	-	83	100.000	Capra_hircus
ENSVPAG00000003016	SRSF6	83	100.000	ENSTSYG00000026476	SRSF6	97	100.000	Carlito_syrichta
ENSVPAG00000003016	SRSF6	74	100.000	ENSCCAG00000026018	-	75	100.000	Cebus_capucinus
ENSVPAG00000003016	SRSF6	74	100.000	ENSCATG00000030794	SRSF6	75	100.000	Cercocebus_atys
ENSVPAG00000003016	SRSF6	74	100.000	ENSCLAG00000010247	SRSF6	76	100.000	Chinchilla_lanigera
ENSVPAG00000003016	SRSF6	74	100.000	ENSCSAG00000014022	SRSF6	75	100.000	Chlorocebus_sabaeus
ENSVPAG00000003016	SRSF6	76	100.000	ENSCHOG00000000561	SRSF6	75	100.000	Choloepus_hoffmanni
ENSVPAG00000003016	SRSF6	83	100.000	ENSCANG00000042529	-	97	100.000	Colobus_angolensis_palliatus
ENSVPAG00000003016	SRSF6	74	100.000	ENSCANG00000037774	-	75	100.000	Colobus_angolensis_palliatus
ENSVPAG00000003016	SRSF6	74	100.000	ENSCGRG00001022339	Srsf6	76	100.000	Cricetulus_griseus_chok1gshd
ENSVPAG00000003016	SRSF6	57	96.410	ENSCGRG00000006618	Srsf6	91	96.891	Cricetulus_griseus_crigri
ENSVPAG00000003016	SRSF6	74	100.000	ENSDNOG00000008410	SRSF6	75	100.000	Dasypus_novemcinctus
ENSVPAG00000003016	SRSF6	74	100.000	ENSDORG00000028378	Srsf6	75	100.000	Dipodomys_ordii
ENSVPAG00000003016	SRSF6	73	100.000	ENSETEG00000006221	SRSF6	76	100.000	Echinops_telfairi
ENSVPAG00000003016	SRSF6	83	100.000	ENSEASG00005023429	SRSF6	83	100.000	Equus_asinus_asinus
ENSVPAG00000003016	SRSF6	83	100.000	ENSECAG00000023932	SRSF6	83	100.000	Equus_caballus
ENSVPAG00000003016	SRSF6	57	95.385	ENSEEUG00000002324	SRSF6	89	95.385	Erinaceus_europaeus
ENSVPAG00000003016	SRSF6	83	100.000	ENSFCAG00000032814	SRSF6	83	100.000	Felis_catus
ENSVPAG00000003016	SRSF6	77	100.000	ENSFDAG00000012191	SRSF6	89	100.000	Fukomys_damarensis
ENSVPAG00000003016	SRSF6	73	96.296	ENSGALG00000000990	SRSF6	74	96.296	Gallus_gallus
ENSVPAG00000003016	SRSF6	74	100.000	ENSGGOG00000009808	SRSF6	75	100.000	Gorilla_gorilla
ENSVPAG00000003016	SRSF6	74	100.000	ENSHGLG00000007348	SRSF6	76	100.000	Heterocephalus_glaber_female
ENSVPAG00000003016	SRSF6	77	100.000	ENSHGLG00100005043	SRSF6	89	100.000	Heterocephalus_glaber_male
ENSVPAG00000003016	SRSF6	74	100.000	ENSSTOG00000010866	SRSF6	75	100.000	Ictidomys_tridecemlineatus
ENSVPAG00000003016	SRSF6	56	94.301	ENSJJAG00000020690	Srsf6	90	93.264	Jaculus_jaculus
ENSVPAG00000003016	SRSF6	69	94.979	ENSLAFG00000006682	SRSF6	90	95.259	Loxodonta_africana
ENSVPAG00000003016	SRSF6	74	100.000	ENSMFAG00000036925	SRSF6	75	100.000	Macaca_fascicularis
ENSVPAG00000003016	SRSF6	74	100.000	ENSMMUG00000006742	SRSF6	75	100.000	Macaca_mulatta
ENSVPAG00000003016	SRSF6	74	100.000	ENSMNEG00000027392	-	75	100.000	Macaca_nemestrina
ENSVPAG00000003016	SRSF6	74	100.000	ENSMNEG00000038270	-	75	100.000	Macaca_nemestrina
ENSVPAG00000003016	SRSF6	63	96.759	ENSMLEG00000031524	SRSF6	100	96.759	Mandrillus_leucophaeus
ENSVPAG00000003016	SRSF6	74	100.000	ENSMICG00000008537	SRSF6	75	100.000	Microcebus_murinus
ENSVPAG00000003016	SRSF6	57	96.410	ENSMOCG00000018738	Srsf6	91	96.891	Microtus_ochrogaster
ENSVPAG00000003016	SRSF6	74	100.000	MGP_CAROLIEiJ_G0024606	Srsf6	76	100.000	Mus_caroli
ENSVPAG00000003016	SRSF6	74	100.000	ENSMUSG00000016921	Srsf6	76	100.000	Mus_musculus
ENSVPAG00000003016	SRSF6	74	100.000	MGP_PahariEiJ_G0026050	Srsf6	76	100.000	Mus_pahari
ENSVPAG00000003016	SRSF6	74	100.000	MGP_SPRETEiJ_G0025528	Srsf6	76	100.000	Mus_spretus
ENSVPAG00000003016	SRSF6	83	77.778	ENSMPUG00000017692	SRSF6	99	77.778	Mustela_putorius_furo
ENSVPAG00000003016	SRSF6	100	80.290	ENSMLUG00000016618	SRSF6	100	80.290	Myotis_lucifugus
ENSVPAG00000003016	SRSF6	74	100.000	ENSNGAG00000017560	Srsf6	76	100.000	Nannospalax_galili
ENSVPAG00000003016	SRSF6	74	100.000	ENSNLEG00000006524	SRSF6	75	100.000	Nomascus_leucogenys
ENSVPAG00000003016	SRSF6	69	96.234	ENSOPRG00000002017	-	90	96.552	Ochotona_princeps
ENSVPAG00000003016	SRSF6	67	100.000	ENSOCUG00000009785	-	76	100.000	Oryctolagus_cuniculus
ENSVPAG00000003016	SRSF6	74	100.000	ENSOGAG00000014468	SRSF6	75	100.000	Otolemur_garnettii
ENSVPAG00000003016	SRSF6	83	100.000	ENSOARG00000003117	SRSF6	83	100.000	Ovis_aries
ENSVPAG00000003016	SRSF6	69	92.593	ENSPPAG00000043131	-	81	92.593	Pan_paniscus
ENSVPAG00000003016	SRSF6	74	100.000	ENSPPAG00000034327	-	75	100.000	Pan_paniscus
ENSVPAG00000003016	SRSF6	83	100.000	ENSPPRG00000008917	SRSF6	83	100.000	Panthera_pardus
ENSVPAG00000003016	SRSF6	63	99.074	ENSPTIG00000019153	SRSF6	100	99.074	Panthera_tigris_altaica
ENSVPAG00000003016	SRSF6	74	100.000	ENSPTRG00000044686	-	75	100.000	Pan_troglodytes
ENSVPAG00000003016	SRSF6	69	92.593	ENSPTRG00000046274	-	81	92.593	Pan_troglodytes
ENSVPAG00000003016	SRSF6	74	100.000	ENSPANG00000035224	SRSF6	75	100.000	Papio_anubis
ENSVPAG00000003016	SRSF6	73	92.593	ENSPKIG00000018463	-	50	96.154	Paramormyrops_kingsleyae
ENSVPAG00000003016	SRSF6	74	100.000	ENSPPYG00000011019	SRSF6	75	100.000	Pongo_abelii
ENSVPAG00000003016	SRSF6	83	100.000	ENSPCOG00000026364	SRSF6	83	100.000	Propithecus_coquereli
ENSVPAG00000003016	SRSF6	74	96.296	ENSPVAG00000015232	SRSF6	75	96.296	Pteropus_vampyrus
ENSVPAG00000003016	SRSF6	74	100.000	ENSRNOG00000006380	Srsf6	76	100.000	Rattus_norvegicus
ENSVPAG00000003016	SRSF6	74	100.000	ENSRBIG00000041414	SRSF6	76	100.000	Rhinopithecus_bieti
ENSVPAG00000003016	SRSF6	74	100.000	ENSRROG00000029989	SRSF6	75	100.000	Rhinopithecus_roxellana
ENSVPAG00000003016	SRSF6	74	100.000	ENSSBOG00000033708	-	75	100.000	Saimiri_boliviensis_boliviensis
ENSVPAG00000003016	SRSF6	75	95.753	ENSSARG00000001602	SRSF6	100	95.753	Sorex_araneus
ENSVPAG00000003016	SRSF6	83	100.000	ENSSSCG00000007362	SRSF6	83	100.000	Sus_scrofa
ENSVPAG00000003016	SRSF6	73	96.296	ENSTGUG00000003455	SRSF6	75	96.296	Taeniopygia_guttata
ENSVPAG00000003016	SRSF6	75	95.385	ENSTBEG00000013448	SRSF6	82	95.385	Tupaia_belangeri
ENSVPAG00000003016	SRSF6	75	97.683	ENSTTRG00000015410	SRSF6	100	97.683	Tursiops_truncatus
ENSVPAG00000003016	SRSF6	83	100.000	ENSUAMG00000003559	SRSF6	83	100.000	Ursus_americanus
ENSVPAG00000003016	SRSF6	63	99.074	ENSUMAG00000001154	SRSF6	100	99.074	Ursus_maritimus