EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000003106 (Gene tree)
Gene ID: -
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 16422 bases
Position: chrGeneScaffold_1177:24819-41240
Accession: 11157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000002873	zf-U1	PF06220.12	7.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000003106	SNRPC-201	543	-	ENSVPAP00000002873	180 (aa)	-	UPI00018BD3F5

Gene Model

Click here to download ENSVPAG00000003106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000003106's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000003106	SNRPC	100	63.889	ENSG00000124562	SNRPC	100	69.492	Homo_sapiens
ENSVPAG00000003106	SNRPC	100	64.641	ENSAMEG00000000963	SNRPC	100	64.641	Ailuropoda_melanoleuca
ENSVPAG00000003106	SNRPC	79	71.831	ENSACAG00000015721	SNRPC	79	71.831	Anolis_carolinensis
ENSVPAG00000003106	SNRPC	79	71.831	ENSANAG00000019157	-	89	71.831	Aotus_nancymaae
ENSVPAG00000003106	SNRPC	100	65.000	ENSANAG00000019696	-	100	65.000	Aotus_nancymaae
ENSVPAG00000003106	SNRPC	79	73.944	ENSANAG00000007843	-	89	73.944	Aotus_nancymaae
ENSVPAG00000003106	SNRPC	79	73.239	ENSANAG00000019726	-	82	73.239	Aotus_nancymaae
ENSVPAG00000003106	SNRPC	79	69.718	ENSANAG00000020588	-	83	69.718	Aotus_nancymaae
ENSVPAG00000003106	SNRPC	71	68.504	ENSANAG00000021026	-	83	68.504	Aotus_nancymaae
ENSVPAG00000003106	SNRPC	79	62.676	ENSAMXG00000032641	snrpc	78	62.676	Astyanax_mexicanus
ENSVPAG00000003106	SNRPC	79	74.648	ENSBTAG00000024549	SNRPC	89	74.648	Bos_taurus
ENSVPAG00000003106	SNRPC	79	72.535	ENSCJAG00000041822	-	89	72.535	Callithrix_jacchus
ENSVPAG00000003106	SNRPC	100	66.111	ENSCJAG00000015321	-	100	66.111	Callithrix_jacchus
ENSVPAG00000003106	SNRPC	79	73.239	ENSCJAG00000043055	-	89	73.239	Callithrix_jacchus
ENSVPAG00000003106	SNRPC	79	61.972	ENSCAFG00000025525	-	89	61.972	Canis_familiaris
ENSVPAG00000003106	SNRPC	79	70.423	ENSCAFG00000031775	-	89	70.423	Canis_familiaris
ENSVPAG00000003106	SNRPC	79	71.831	ENSCAFG00020005758	-	89	71.831	Canis_lupus_dingo
ENSVPAG00000003106	SNRPC	79	74.648	ENSCAFG00020005945	-	89	74.648	Canis_lupus_dingo
ENSVPAG00000003106	SNRPC	79	70.423	ENSCAFG00020017383	-	89	70.423	Canis_lupus_dingo
ENSVPAG00000003106	SNRPC	79	73.944	ENSCHIG00000012087	-	89	73.944	Capra_hircus
ENSVPAG00000003106	SNRPC	79	74.648	ENSTSYG00000011216	-	89	74.648	Carlito_syrichta
ENSVPAG00000003106	SNRPC	79	57.042	ENSTSYG00000025721	-	88	49.296	Carlito_syrichta
ENSVPAG00000003106	SNRPC	79	74.648	ENSCAPG00000005161	SNRPC	100	74.648	Cavia_aperea
ENSVPAG00000003106	SNRPC	79	74.648	ENSCPOG00000008563	SNRPC	89	74.648	Cavia_porcellus
ENSVPAG00000003106	SNRPC	79	69.014	ENSCCAG00000022751	-	87	69.014	Cebus_capucinus
ENSVPAG00000003106	SNRPC	78	56.429	ENSCCAG00000026624	-	58	50.714	Cebus_capucinus
ENSVPAG00000003106	SNRPC	79	62.676	ENSCCAG00000028293	-	51	89.394	Cebus_capucinus
ENSVPAG00000003106	SNRPC	79	70.423	ENSCCAG00000036059	-	79	70.423	Cebus_capucinus
ENSVPAG00000003106	SNRPC	100	65.000	ENSCATG00000035787	SNRPC	100	65.000	Cercocebus_atys
ENSVPAG00000003106	SNRPC	79	74.648	ENSCLAG00000016920	SNRPC	89	74.648	Chinchilla_lanigera
ENSVPAG00000003106	SNRPC	79	71.831	ENSCPBG00000027142	SNRPC	89	71.831	Chrysemys_picta_bellii
ENSVPAG00000003106	SNRPC	100	64.444	ENSCANG00000028035	SNRPC	100	64.444	Colobus_angolensis_palliatus
ENSVPAG00000003106	SNRPC	79	61.268	ENSCGRG00001021483	-	88	57.746	Cricetulus_griseus_chok1gshd
ENSVPAG00000003106	SNRPC	79	73.944	ENSCGRG00001009011	-	89	73.944	Cricetulus_griseus_chok1gshd
ENSVPAG00000003106	SNRPC	79	73.944	ENSCGRG00000005005	Snrpc	89	73.944	Cricetulus_griseus_crigri
ENSVPAG00000003106	SNRPC	79	62.676	ENSDARG00000009871	snrpc	89	62.676	Danio_rerio
ENSVPAG00000003106	SNRPC	79	73.239	ENSDNOG00000034699	-	89	73.239	Dasypus_novemcinctus
ENSVPAG00000003106	SNRPC	57	69.903	ENSDORG00000005955	Snrpc	59	74.648	Dipodomys_ordii
ENSVPAG00000003106	SNRPC	58	67.619	ENSETEG00000008756	-	100	67.619	Echinops_telfairi
ENSVPAG00000003106	SNRPC	79	74.648	ENSEASG00005021007	SNRPC	89	74.648	Equus_asinus_asinus
ENSVPAG00000003106	SNRPC	79	74.648	ENSECAG00000026848	SNRPC	89	74.648	Equus_caballus
ENSVPAG00000003106	SNRPC	79	61.268	ENSELUG00000000815	SNRPC	89	61.268	Esox_lucius
ENSVPAG00000003106	SNRPC	100	62.222	ENSFCAG00000044077	-	89	74.648	Felis_catus
ENSVPAG00000003106	SNRPC	79	73.239	ENSFALG00000003756	SNRPC	89	73.239	Ficedula_albicollis
ENSVPAG00000003106	SNRPC	79	74.648	ENSFDAG00000018111	SNRPC	89	74.648	Fukomys_damarensis
ENSVPAG00000003106	SNRPC	79	71.329	ENSGALG00000002773	SNRPC	89	71.329	Gallus_gallus
ENSVPAG00000003106	SNRPC	79	71.831	ENSGAGG00000003063	SNRPC	89	71.831	Gopherus_agassizii
ENSVPAG00000003106	SNRPC	79	74.648	ENSGGOG00000012499	SNRPC	89	74.648	Gorilla_gorilla
ENSVPAG00000003106	SNRPC	79	74.648	ENSHGLG00000013981	SNRPC	90	74.648	Heterocephalus_glaber_female
ENSVPAG00000003106	SNRPC	79	74.648	ENSHGLG00100009478	SNRPC	90	74.648	Heterocephalus_glaber_male
ENSVPAG00000003106	SNRPC	79	71.127	ENSHGLG00100017764	-	89	71.127	Heterocephalus_glaber_male
ENSVPAG00000003106	SNRPC	79	62.676	ENSIPUG00000024851	snrpc	89	62.676	Ictalurus_punctatus
ENSVPAG00000003106	SNRPC	79	74.648	ENSSTOG00000013786	SNRPC	89	74.648	Ictidomys_tridecemlineatus
ENSVPAG00000003106	SNRPC	79	73.944	ENSJJAG00000021741	Snrpc	89	73.944	Jaculus_jaculus
ENSVPAG00000003106	SNRPC	79	74.648	ENSLAFG00000013534	SNRPC	89	74.648	Loxodonta_africana
ENSVPAG00000003106	SNRPC	100	64.444	ENSMFAG00000031764	-	100	65.000	Macaca_fascicularis
ENSVPAG00000003106	SNRPC	79	74.648	ENSMFAG00000030525	-	89	74.648	Macaca_fascicularis
ENSVPAG00000003106	SNRPC	79	69.014	ENSMMUG00000045425	-	89	69.014	Macaca_mulatta
ENSVPAG00000003106	SNRPC	79	74.648	ENSMMUG00000000869	-	89	74.648	Macaca_mulatta
ENSVPAG00000003106	SNRPC	79	73.239	ENSMMUG00000039415	-	89	73.239	Macaca_mulatta
ENSVPAG00000003106	SNRPC	100	65.000	ENSMNEG00000032731	SNRPC	100	65.000	Macaca_nemestrina
ENSVPAG00000003106	SNRPC	100	65.000	ENSMLEG00000033916	-	100	65.000	Mandrillus_leucophaeus
ENSVPAG00000003106	SNRPC	79	68.310	ENSMLEG00000040224	-	82	68.310	Mandrillus_leucophaeus
ENSVPAG00000003106	SNRPC	79	68.310	ENSMGAG00000006054	SNRPC	89	71.127	Meleagris_gallopavo
ENSVPAG00000003106	SNRPC	79	68.310	ENSMICG00000036552	-	78	69.014	Microcebus_murinus
ENSVPAG00000003106	SNRPC	100	64.088	ENSMICG00000007339	-	100	65.193	Microcebus_murinus
ENSVPAG00000003106	SNRPC	79	74.648	ENSMICG00000009130	-	88	74.648	Microcebus_murinus
ENSVPAG00000003106	SNRPC	79	73.944	ENSMICG00000032183	-	89	73.944	Microcebus_murinus
ENSVPAG00000003106	SNRPC	79	73.944	ENSMOCG00000017609	Snrpc	89	73.944	Microtus_ochrogaster
ENSVPAG00000003106	SNRPC	79	73.239	ENSMODG00000013904	-	89	73.239	Monodelphis_domestica
ENSVPAG00000003106	SNRPC	79	73.944	MGP_CAROLIEiJ_G0021308	Snrpc	89	73.944	Mus_caroli
ENSVPAG00000003106	SNRPC	79	73.944	ENSMUSG00000024217	Snrpc	90	73.944	Mus_musculus
ENSVPAG00000003106	SNRPC	79	74.648	ENSMPUG00000003210	SNRPC	89	74.648	Mustela_putorius_furo
ENSVPAG00000003106	SNRPC	79	74.648	ENSMLUG00000002488	SNRPC	89	74.648	Myotis_lucifugus
ENSVPAG00000003106	SNRPC	79	73.944	ENSNGAG00000019686	Snrpc	89	73.944	Nannospalax_galili
ENSVPAG00000003106	SNRPC	100	65.193	ENSNLEG00000034810	SNRPC	100	65.193	Nomascus_leucogenys
ENSVPAG00000003106	SNRPC	79	73.944	ENSMEUG00000009300	SNRPC	100	73.944	Notamacropus_eugenii
ENSVPAG00000003106	SNRPC	79	74.648	ENSODEG00000017080	-	89	74.648	Octodon_degus
ENSVPAG00000003106	SNRPC	79	73.239	ENSODEG00000019633	-	89	73.239	Octodon_degus
ENSVPAG00000003106	SNRPC	79	73.944	ENSODEG00000020201	-	89	73.944	Octodon_degus
ENSVPAG00000003106	SNRPC	79	74.648	ENSODEG00000018985	-	89	74.648	Octodon_degus
ENSVPAG00000003106	SNRPC	79	74.648	ENSODEG00000020370	-	89	74.648	Octodon_degus
ENSVPAG00000003106	SNRPC	79	71.918	ENSOANG00000003405	SNRPC	99	71.918	Ornithorhynchus_anatinus
ENSVPAG00000003106	SNRPC	79	74.648	ENSOCUG00000026668	-	89	74.648	Oryctolagus_cuniculus
ENSVPAG00000003106	SNRPC	79	73.239	ENSOCUG00000026430	-	88	73.239	Oryctolagus_cuniculus
ENSVPAG00000003106	SNRPC	77	61.594	ENSOGAG00000028405	-	89	61.594	Otolemur_garnettii
ENSVPAG00000003106	SNRPC	99	63.889	ENSOGAG00000008755	-	100	63.889	Otolemur_garnettii
ENSVPAG00000003106	SNRPC	79	74.648	ENSOGAG00000026269	-	89	74.648	Otolemur_garnettii
ENSVPAG00000003106	SNRPC	79	74.648	ENSOARG00000010823	SNRPC	89	74.648	Ovis_aries
ENSVPAG00000003106	SNRPC	79	74.648	ENSPPAG00000043871	SNRPC	89	74.648	Pan_paniscus
ENSVPAG00000003106	SNRPC	100	62.222	ENSPPRG00000008647	-	89	74.648	Panthera_pardus
ENSVPAG00000003106	SNRPC	100	62.222	ENSPTIG00000021867	-	89	74.648	Panthera_tigris_altaica
ENSVPAG00000003106	SNRPC	79	74.648	ENSPTRG00000018070	SNRPC	89	74.648	Pan_troglodytes
ENSVPAG00000003106	SNRPC	100	65.000	ENSPANG00000022802	-	100	65.000	Papio_anubis
ENSVPAG00000003106	SNRPC	79	59.441	ENSPKIG00000001671	SNRPC	90	57.042	Paramormyrops_kingsleyae
ENSVPAG00000003106	SNRPC	79	71.127	ENSPSIG00000004876	SNRPC	70	71.127	Pelodiscus_sinensis
ENSVPAG00000003106	SNRPC	79	48.592	ENSPMGG00000022162	snrpc	54	62.667	Periophthalmus_magnuspinnatus
ENSVPAG00000003106	SNRPC	79	73.944	ENSPEMG00000010773	Snrpc	89	73.944	Peromyscus_maniculatus_bairdii
ENSVPAG00000003106	SNRPC	79	70.423	ENSPEMG00000002763	-	89	69.014	Peromyscus_maniculatus_bairdii
ENSVPAG00000003106	SNRPC	79	74.648	ENSPCAG00000016885	SNRPC	81	74.648	Procavia_capensis
ENSVPAG00000003106	SNRPC	100	64.088	ENSPCOG00000004904	SNRPC	100	64.088	Propithecus_coquereli
ENSVPAG00000003106	SNRPC	100	62.983	ENSPVAG00000015597	SNRPC	100	62.983	Pteropus_vampyrus
ENSVPAG00000003106	SNRPC	79	73.944	ENSRNOG00000000493	Snrpc	89	73.944	Rattus_norvegicus
ENSVPAG00000003106	SNRPC	100	65.000	ENSRBIG00000037567	-	100	65.000	Rhinopithecus_bieti
ENSVPAG00000003106	SNRPC	79	74.648	ENSRBIG00000022998	-	89	74.648	Rhinopithecus_bieti
ENSVPAG00000003106	SNRPC	79	74.648	ENSRBIG00000014819	-	89	74.648	Rhinopithecus_bieti
ENSVPAG00000003106	SNRPC	100	65.000	ENSRROG00000041300	SNRPC	100	65.000	Rhinopithecus_roxellana
ENSVPAG00000003106	SNRPC	100	65.556	ENSSBOG00000031528	-	100	65.556	Saimiri_boliviensis_boliviensis
ENSVPAG00000003106	SNRPC	79	73.944	ENSSHAG00000000945	-	79	73.944	Sarcophilus_harrisii
ENSVPAG00000003106	SNRPC	95	85.380	ENSSARG00000008970	SNRPC	96	85.380	Sorex_araneus
ENSVPAG00000003106	SNRPC	79	72.535	ENSSPUG00000002502	SNRPC	89	72.535	Sphenodon_punctatus
ENSVPAG00000003106	SNRPC	79	74.648	ENSSSCG00000001531	SNRPC	89	74.648	Sus_scrofa
ENSVPAG00000003106	SNRPC	79	73.239	ENSTGUG00000001773	SNRPC	89	73.239	Taeniopygia_guttata
ENSVPAG00000003106	SNRPC	100	64.286	ENSTTRG00000007827	SNRPC	100	64.286	Tursiops_truncatus
ENSVPAG00000003106	SNRPC	79	72.535	ENSVVUG00000010467	-	79	72.535	Vulpes_vulpes
ENSVPAG00000003106	SNRPC	79	73.239	ENSVVUG00000021947	-	89	73.239	Vulpes_vulpes